Entry information : AcoPrx[P]108
Entry ID 9956
Creation 2011-11-25 (Qiang LI)
Last sequence changes 2011-12-14 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2011-12-14 (Qiang Li)
Peroxidase information: AcoPrx[P]108
Name AcoPrx[P]108
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Ranunculaceae Aquilegia
Organism Aquilegia coerulea     [TaxId: 218851 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AcoPrx[P]108
start..stop
S start..stop
AcoPrx[P]71 326 2e-116 1..183 1..183
AcoPrx76 237 1e-79 1..183 1..193
AcoPrx16 179 2e-56 27..183 46..211
AfpPrx05 179 3e-56 27..183 46..211
Literature and cross-references AcoPrx[P]108
DNA ref. Phytozome 12:   scaffold_49 (844673..846576)
Protein sequence: AcoPrx[P]108
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   182 (159)
PWM (Da):   %s   19209.24 (16553.9)  
PI (pH):   %s   4.22 (4.14) Peptide Signal:   %s   cut: 24 range:24-182
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MS*PIFFFCC LMLLLLRQPN STLSAEFYNT SCPEAETICM SFxxxxxNQD PTLAASLLQL SFPDCFVQGC DAFVLLDDTE YHVREKSALP NFQSLRGFDV IDTIKVELEK ASPHTVSCSD 
VLYYHINGAL SxxGRRESFV ANNTAVFQGL PNPNSDLADL FAKFEQAGMN LEDMVALSGG HTI 

Retrieve as FASTA  
Remarks Pseudogene from genomic (Stop in frame; 3' end is missing). No prediction from phytozome.
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTCTTGAC CAATCTTTTT CTTCTGTTGC TTAATGCTAC TGCTTCTTCG TCAGCCTAAT TCCACTTTAA GTGCAGAATT CTACAATACT TCATGCCCAG AAGCTGAAAC CATCTGTATG  TCCTTTTnnn nnnnnnnnnn nAACCAAGAT CCAACCCTGG CAGCATCGCT TTTACAGTTG AGTTTCCCTG ACTGTTTTGT TCAGGTTTGC ATAAATATTA TCTTAAGTTT TTAAGTCGTG  ATTTGAAATA TTTCATCCCA AGAGTTTTGT AAAGGTGTGT CCATGACTTC ATTCTGCTTG CTCAGAGGTT CTTGTGTGGC TGATCCTTTA CCTGCAACTG CGAAACTACC TTAGGAAATC  GCAATATACC ACCTCTGAGC AGTTAATTGG TTTCATTTTG GTGTGATTTC TGCATTCAAT GTTTATATTA TGTGTATTTG AACTTATTCG GCAACTAGAT CATTAAGCCG GTGCCATATT  GTTGACTATT TTTTTTTCCC AATTTGTCAT GTACAACATA TAAAATGAAT TGCTGATAGA AAATTGTTTA TCATTCCTCT TTAAGCTAGT TACACTTTCA TTGTACAGAT CGAGTTTGTG  TGAAATAACA ATGGGATTAT ATTTCTTCTA ATAACTTGGT TTTCGTAGGG CTGTGACGCA TTCGTTCTTT TGGATGATAC AGAATACCAT GTCCGGGAAA AGTCAGCACT GCCTAACTTT  CAGTCTCTCC GAGGATTTGA TGTCATAGAC ACCATCAAGG TTGAACTAGA AAAGGCTTCC CCTCACACAG TTTCATGCTC GGATGTCCTT TATTATCATA TCTAATTGAA AACACAAAAG  AGCAGAGGAA TAAAAACAGG CAAGCTATTG TTATTTGGAC TGGACAGTCC TGCCAGATAA TCAGCAACCC TATATACTTC TCTAAACACA TGGATTACAT TCACACTACA CATCAATCTT  ACAGTTCCTT TAATTGGCGC TATTAAGTTT GCGCAGTACA ATGGGAATTC TCATTTTCTC TTGATAATAG TGATTGCCCT TAGGGTCCGT GGCCACTACA ACATTTTGCA AATTAGTTCT  CTGGCATTCC TGTAGACCAC TTCAACTGCC TTTAACTCTT GTACAAAAGC ACTGATCTCA CTATACTTCC TAGTATAGTC AGATACTAGG CAGCTAACTT TATTTTGAGT CTTCTGGGAA  GTTCCATTGT GCTTACGCCA ATGTTAGTAA ATTGTTAGTA ACCCAACGTn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn  nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnGAAACT ACAAATGCAA TATAATAATT TTGAAACTTC AAAATAAAAA ATTAGGATAT AAAAGGAACT  GATTATAGAA GCAGAGTGTT GGTAGTCTTT GTACTTGGTT TGTTTTTCAT TGTTGTTCAT CTAGCTAATG TTGAGTACTG ATGATTACCT CTATTACTAA TTACTAGCTC ACAAGTGTTC  TGTAACTTTG ATGTATATGT CACTTTGTTA ATGACATGCC AATTACTAAT AATGTGTATC TAAGTTCAGA ATGGATATAC ATCTGTCTTA TATGGCCAGT TCATCATCAT ATCTAAACAT  TGAAATTAGA TGATATACTG CATGCAGTTA ACACTTGTGT TTTGGTCTGT ATATGCAGTC AGGAGGACCT AAATGGAGCA TTGAGTTCnn nnGGCAGGAG AGAGAGCTTT GTGGCAAATA  ACACAGCTGT CTTTCAGGGA CTTCCAAATC CAAATTCTGA CCTTGCAGAT CTGTTCGCAA AATTTGAGCA AGCAGGTATG AACCTTGAAG ATATGGTAGC CCTCTCAGGA GGGCATACCA 
TA 

Retrieve as FASTA