The peroxidase database
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Classes

Catalase typical (heme, monofunctional)

  Contact author: Marcel Zamocky

  Last update: 2017-05-12 (Marcel Zamocky)

Catalase (Kat)
Catalase-Lipoxygenase fusion protein (KatLox)
Profiles

Catalase:
Pfam : PF00199, catalase and PF06628, Catalase-related.
InterPro : IPR002226, Catalase; IPR011614, Catalase, N-terminal and IPR010582, Catalase-related (small domain).
Catalase-Lipoxygenase:
Interpro: IPR000907, Lipoxygenase; IPR013819 Lipoxygenase, C-terminal

Description Catalase or HPII (hydroperoxidase II): Catalase is haem-containing enzyme able to dismutate H2O2. It is a key enzyme in protecting all types of organisms against reactive oxygen species. It is controlled as part of the sS regulon in bacteria. Besides hydrogen peroxide and aliphatic peroxides it can oxidise certain 2-electron acceptors. Catalase catalyse the degradation of H2O2 via the two-stage mechanism. One hydrogen peroxide molecule oxidizes the heme (Por-FeIII) and the second hydrogen peroxide molecule is utilized as a reductant of compound I (Por+.-FeIV = O) to regenerate the initial enzyme state.

Enz (Por-FeIII) + H2O2 Cpd I (Por+.-FeIV = O) + H2O
Cpd I (Por+.-FeIV= O) + H2O2 Enz (Por-FeIII) + H2O + O2

Heme-containing catalases are subdivided based on their size: large (> 75 kDa) or small (< 60 kDa) subunits. Phylogenetic analyses have demonstrated the existence of two distinct clades or subgroupings of small subunit enzymes and one clade of large subunit enzymes among the monofunctional catalases (Nicholls et al., 2004; Zamocky et al., 2008). Further two evolutionary convergent families of catalase can be found: bifunctional haem-containing peroxidase/catalases (CP) and monofuctional non-haem manganese-containing catalases (MnCat).
The monofunctional (typical) catalase is detected in all aerobic and facultative aerobic organisms. The number of kat-isoforms in genomes can vary from 1 to 3 copies.


Kat-Lipoxyxenase KatLox is fusion protein detected marginally in 2 Metazoa and 1 cyanobacteria. N-terminal encodes oxide synthase domain - similar to catalase and C-terminal encodes 8R-lipoxygenase domain belonging to the lipoxygenase family. This protein converts arachidonic acid to an allene oxide with an 8R-hydroperoxide intermediate. Kat and Lox domains have also been detected in Plesiocystis pacifica (proteobacteria): the two domains are in tandem (2 frames) and in inverse orientation.

Literature Zámocký, M., Furtmuller, P.G., Obinger, C. (2008) Evolution of Catalases from Bacteria to Humans. Antioxid Redox Signaling 10:1527-1548.

Zámocký, M., Gasselhuber, B., Furtmüller, P., Obinger, C. (2012) Molecular evolution of hydrogen peroxide degrading enzymes. Arch. Biochem. Biophys. 525:134-144.

Zamocky M, Koller F. Understanding the structure and function of catalases: clues from molecular evolution and in vitro mutagenesis. Prog Biophys Mol Biol. 1999;72(1):19-66. Review. PMID: 10446501

Switala J, Loewen PC. Diversity of properties among catalases. Arch Biochem Biophys. (2002) 401(2):145-54. PMID: 12054464

Chelikani P, Fita I, Loewen PC. Diversity of structures and properties among catalases. Cell Mol Life Sci. 2004 Jan;61(2):192-208. Review. PMID: 14745498
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