PeroxiBase - VpCP01

PeroxiBase - VpCP01_RIMD2210633

Entry information

Entry ID

2655

Last sequence changes

2006-08-29 (Christophe Dunand)

Sequence status

complete

Reviewer

Filippo Passardi

Last annotation changes

2007-03-13 (Filippo Passardi)

Peroxidase information

Name

VpCP01_RIMD2210633

Class

Catalase peroxidase

Taxonomy

Bacteria Proteobacteria Gammaproteobacteria Vibrionales

Organism

Vibrio parahaemolyticus [TaxId: 670]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value
SspCP01_PCC7002 (KatG)	1253	0
SeCP01_PCC7942 (SynecspCP)	1246	0
SeCP01_PCC6301	1245	0
ValCP01_12G01	1215	0
VchCP01_MO10	1212	0

Literature and cross-references

Literature

REFERENCE 1

Makino,K. et al.

Genome sequence of Vibrio parahaemolyticus: a pathogenic mechanism
distinct from that of V cholerae

Lancet 361 (9359), 743-749 (2003)

REFERENCE 2

Nasu,H., Iida,T., Sugahara,T., Yamaichi,Y., Park,K.S., Yokoyama,K.,
Makino,K., Shinagawa,H. and Honda,T.

A filamentous phage associated with recent pandemic Vibrio
parahaemolyticus O3:K6 strains

J. Clin. Microbiol. 38 (6), 2156-2161 (2000)

DNA sequence

http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val=47118311&itemID=453&view=gbwithparts

Other sequence link

http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val=28899855&itemID=453&view=gbwithparts

Protein ref.

UniProtKB: Q87J02

Protein sequence

Sequence length

721 amino acids

Sequence

MTQQNAHSEG KCPVMHGSMT TNNRTEKNWW PKSLNLDILH QHDAKTNPMP SDFDYQEEVK KLDFSALKQD LIALMTDSQE WWPADWGHYG GLMIRMSWHA 
AGTYRIADGR GGAGTGNLRF APLNSWPDNA NLDKARRILW PIKKKYGNQL SWADLIAYAG TMAYESMGLK TFGFGFGRED IWHPEKDIYW GSEKEWLAPT 
NNPNSRYSGE RDLENPLAAV MMGLIYVNPE GVDGQPDPLK TAHDVRVTFA RMAMNDEETV ALTAGGHTVG KAHGNGDAAN LGPEPEGADI HDQGLGWLNK 
TTRGVGNNAV TSGIEGAWTS QPTQWDNGYF HLLLNYDWEL KKSPAGAWQW EPIDIKEEDK PVDPENPNVR HNPIMTDADM AMKMDPEYRK ISERFHSDPA 
YFADTFARAW FKLTHRDMGP KARYIGPDVP QEDLIWQDPV PNGNANYDID AVKAKIAASG LSVSDMVTTA WDSARTFRQS DKRGGANGAR VRLAPQKDWQ 
GNEPERLARV LPVLENIAKD TGASVADVVV LAGNVGIEQA ASAAGVNVTV PFLPGRGDAT QEMTDVESFE VLEPLHDGYR NWLKQNYVVT PEEMLLDRTQ 
LMGLTAAEMT VLVGGMRVLG TNHGGSKHGV FTDRVGQLTN DFFINLTDMK YTWEPVGENL YEIRSRRSKD VKWTATRVDL VFGSNSILRA YAELYAQDDN 
AGKFVEDFVA AWTKVMNADR F 

Retrieve as FASTA

Remarks

From chromosome II, complete sequence (1.8 M). Serotype="O3:K6".

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Hosted by:

The Bioinformatics platform of Toulouse-Midi-Pyrénnées