The peroxidase database

CIWOG from BLAST

Common Introns Within Orthologous Genes (2009 Wilkerson MD & al. CIWOG) seeks commons introns in groups of orthologous genes or families of paralogous genes. Common introns are detected from their position and sequence conservation in the corresponding protein alignments.

Documentation

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INPUT

CIWOG from Blast needs 3 types of inputs:
  • a Gene structure file.
  • a genomic sequence in FASTA format.
  • a protein sequence in FASTA format.

This procedure can also be lauched following the results of a Ciwog from Search.

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