Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
213 |
PWM (Da): |
23931.51 |
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PI (pH):
| 10.21 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MIRRRFISTFSSGLFIPVVNSSRRTLFLSYKLRPLYHSPPKLRYLHTMSNEKSGFYSLKAELPGNKVFDFADLKGKVVLIVNTASECGFTPQYTGLQALYDKYKDQNFTIIGFPSNQFGGQEPRDDAGIAEFCTLNHGVTFPLMKKSDVNGDKTNEVFKWLKSEKAGILGLTRIKWNFEKFLIDKNGNVVQRWASTTTPSAIDAEVAKLVKA* |
Retrieve as FASTA
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Remarks |
Complete sequence from genomic (4 introns).Incorrect prediction from JGI (large PS is missing). |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGATCAGGAGGCGATTCATCAGCACATTTTCTTCAGGATTATTTATTCCCGTTGTTAACTCTTCTCGACGTACACTCTTCCTCTCGTATAAACTTCGACCTCTTTATCACAGCCCGCCC AAATTAAGGTATCTGCACACCATGTCTAACGAAAAGTCTGGATTCTATTCCTTGAAAGCCGAATTGCCTGGTAACAAGGTCTTCGATTTCGCCGACCTGAAAGGCAAAGTGGTCCTTATC GTAAACACTGCTTCTGAGTGGTACGAGACTCCGACTTGCTAGTTGTAACAATGGCATTCACGAGAATTTGCAGTGGTTTTACCCCTCAATACACAGGTGCGTCTCCGTTTGCACGTCTCC GATAGGAGATTAACGCTTTCCGCAGGTTTGCAGGCTTTGTACGACAAGTACAAGGACCAGAACTTTACCATTATTGGTTTCCCATCGAATCAAGTACGCCACTCTGCTTCGCTTTGAGAG TTCTCTTACTCAACAGCCCTTCTAGTTTGGCGGGCAGGAGCCCCGCGATGATGCTGGAATTGCCGAATTTTGCACTCTTAACCATGGTGTTACATTCCCGCTCATGAAGAAGTCGGACGT GAATGGCGACAAAACGAATGAAGTCTTCAAGTGGTTGAAGTCGGAAAAGGCTGGCATCTTGGGGCTAACTCGTATCAAGGTGCGTATCGACGTTGCCTAGACCCGGGTCAAAGCTGACTC GGCTCTGTAACCTTGACTTCAGTGGAATTTTGAAAAGTTTTTGATTGACAAGAATGGCAATGTTGTTCAACGCTGGGCGTCCACTACGACACCGTCAGCCATTGATGCTGAAGTCGCGAA ACTGGTCAAAGCATAG |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGATCAGGAGGCGATTCATCAGCACATTTTCTTCAGGATTATTTATTCCCGTTGTTAACTCTTCTCGACGTACACTCTTCCTCTCGTATAAACTTCGACCTCTTTATCACAGCCCGCCC AAATTAAGGTATCTGCACACCATGTCTAACGAAAAGTCTGGATTCTATTCCTTGAAAGCCGAATTGCCTGGTAACAAGGTCTTCGATTTCGCCGACCTGAAAGGCAAAGTGGTCCTTATC GTAAACACTGCTTCTGAGTGTGGTTTTACCCCTCAATACACAGGTTTGCAGGCTTTGTACGACAAGTACAAGGACCAGAACTTTACCATTATTGGTTTCCCATCGAATCAATTTGGCGGG CAGGAGCCCCGCGATGATGCTGGAATTGCCGAATTTTGCACTCTTAACCATGGTGTTACATTCCCGCTCATGAAGAAGTCGGACGTGAATGGCGACAAAACGAATGAAGTCTTCAAGTGG TTGAAGTCGGAAAAGGCTGGCATCTTGGGGCTAACTCGTATCAAGTGGAATTTTGAAAAGTTTTTGATTGACAAGAATGGCAATGTTGTTCAACGCTGGGCGTCCACTACGACACCGTCA GCCATTGATGCTGAAGTCGCGAAACTGGTCAAAGCATAG |
Retrieve as FASTA
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