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Entry information : GsppGPx01
Entry ID 10008
Creation 2011-12-20 (Passaia Gisèle)
Last sequence changes 2016-01-20 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2016-01-20 (Achraf Jemmat)
Peroxidase information: GsppGPx01
Name GsppGPx01
Class Fungi-Bacteria glutathione peroxidase    [Orthogroup: Gpx3001]
Taxonomy Fungi/Metazoa; Fungi; Basidiomycota; Basidiomycota
Organism Ganoderma sp. 10597 SS1    [TaxId: 767862 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GsppGPx01
start..stop		 S start..stop
DsGPx01 349 1.66e-123 12..234 22..238
ParcGPx01 306 8.6e-108 73..234 1..162
TvGPx01 308 2.41e-107 14..234 7..230
BaGPx01 290 8.9e-101 35..234 13..214
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 967960..968288 327 N° 2 967797..967887 89 N° 3 967463..967636 172 N° 4 967188..967295 106
complement(join(967188..967295,967463..967636,967797..967887,967960..968288))


exon

Literature and cross-references GsppGPx01
DNA ref. JGI genome:   scaffold_13 (968072..967188)
Protein sequence: GsppGPx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   233 (365)
PWM (Da):   %s   26202.6 (38501.0)  
PI (pH):   %s   10.08 (4.31) Peptide Signal:   %s   cut: 19 range:19-383
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAHPSLDVTVRARPLFHKVSLRVARATTRTPPTLRQLHRPLSHRSCLETFPKSSSRLLQTPSSRTFSTTPPAMSDAGFYSLKATAPGNKPYEFEQLKGKVVLIVNTASKCGFTPQYKGLE
ALYKKYKDQNFVILGFPCNQFGGQEPENDEKIAEFCELNHGVTFPLMAKSDVNGDNTNEVYKWLKSQKSGLLGLTRIKWNFEKFLIDREGKVVHRWASTTSPESIDAEIAKLL*

Retrieve as FASTA  
Remarks Complete sequence from genomic (4 introns). Strain="10597 SS1".
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCCATCCCAGCCTCGACGTCACTGTCAGGGCACGCCCTCTATTTCATAAGGTCTCTCTCCGAGTTGCCCGTGCTACTACTAGAACCCCTCCCACACTTCGTCAGCTCCATCGTCCA
CTCTCTCACCGCTCGTGTCTGGAGACCTTTCCGAAGTCTTCCTCACGCCTACTTCAAACTCCCTCTTCTCGTACCTTCTCCACGACACCGCCAGCCATGTCCGACGCGGGCTTCTACTCC
CTCAAGGCGACCGCACCCGGAAACAAGCCGTATGAGTTTGAGCAACTGAAGGGCAAGGTCGTCCTCATCGTGAACACCGCGTCCAAGTGGTAAAGACCTGCACTCCTCGAAGTCTTGAGC
GATTAGGTCTCACTATGAGCCTGTTCATCCAATCTGTTTAGCGCGGCTTTACGCCCCAATATAAGGGTCTTGAGGCCCTGTACAAGAAGTACAAGGACCAGAACTTCGTCATCCTCGGCT
TCCCCTGCAACCAGGTGCGTAGTGTCCTCGCCTGTCCGATTCCTCTCTGTTTATCGCGAGTCTGCTACTCCCATTCCTCATCCCGTCCCACCTCCCACGTCAATAACCGTCATTCTTGCA
ATACCGTCGAACGTCGGACGGTTGAATACGTGTGCGAATACCCCGGCATGGCAGTTTTCGGTGGCCAGGAGCCCGAGAACGACGAGAAGATCGCCGAGTTCTGCGAGCTCAACCACGGCG
TCACCTTCCCGCTCATGGCCAAGTCGGACGTCAATGGCGACAACACGAACGAGGTCTACAAATGGCTCAAGTCCCAGAAGTCCGGCCTCCTCGGCCTCACCCGCATCAAGGTGCGTTCTC
CTACCACTCAGCTTGCACCCCCTCCCCTTCTTTTCCTCTATCCCTATCACCCGTCCATCCATCCTGGTTCCAGGCTAGAGTCACTGCGTTTTCCCTCCTGCGACGCCCTACGCTCAGACC
AAACGCGTAACACTAACGCTTGTCCTACCACTTCCAGTGTGGAACTTCGAGAAGTTCCTGATCGACCGTGAGGGCAAGGTCGTCCACCGCTGGGCCTCGACCACCTCCCCGGAGTCCATC
GATGCCGAGATCGCCAAGCTCTTGTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCCATCCCAGCCTCGACGTCACTGTCAGGGCACGCCCTCTATTTCATAAGGTCTCTCTCCGAGTTGCCCGTGCTACTACTAGAACCCCTCCCACACTTCGTCAGCTCCATCGTCCA
CTCTCTCACCGCTCGTGTCTGGAGACCTTTCCGAAGTCTTCCTCACGCCTACTTCAAACTCCCTCTTCTCGTACCTTCTCCACGACACCGCCAGCCATGTCCGACGCGGGCTTCTACTCC
CTCAAGGCGACCGCACCCGGAAACAAGCCGTATGAGTTTGAGCAACTGAAGGGCAAGGTCGTCCTCATCGTGAACACCGCGTCCAAGTGCGGCTTTACGCCCCAATATAAGGGTCTTGAG
GCCCTGTACAAGAAGTACAAGGACCAGAACTTCGTCATCCTCGGCTTCCCCTGCAACCAGTTCGGTGGCCAGGAGCCCGAGAACGACGAGAAGATCGCCGAGTTCTGCGAGCTCAACCAC
GGCGTCACCTTCCCGCTCATGGCCAAGTCGGACGTCAATGGCGACAACACGAACGAGGTCTACAAATGGCTCAAGTCCCAGAAGTCCGGCCTCCTCGGCCTCACCCGCATCAAGTGGAAC
TTCGAGAAGTTCCTGATCGACCGTGAGGGCAAGGTCGTCCACCGCTGGGCCTCGACCACCTCCCCGGAGTCCATCGATGCCGAGATCGCCAAGCTCTTGTGA

Retrieve as FASTA