RedOxiBase: View Perox 10011

Entry information : PangGPx01

Entry ID	10011
Creation	2011-12-20 (Passaia GisÃ¨le)
Last sequence changes	2011-12-20 (Passaia GisÃ¨le)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2013-09-06 (Catherine Mathe (Scipio))

Peroxidase information: PangGPx01

Name

PangGPx01

Class

Fungi-Bacteria glutathione peroxidase [Orthogroup: Gpx3001]

Taxonomy

Eukaryota Fungi Ascomycota Saccharomycetes Saccharomycetaceae Pichia

Organism

Pichia angusta (Hansenula polymorpha) [TaxId: 4905 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	PangGPx01 start..stop	S start..stop
PmemGPx01	237	2e-81	1..161	24..184
KlGPx	234	2e-80	1..161	1..161
ScaGPx02	231	2e-79	1..161	1..161
SceGPx03	231	2e-79	1..161	1..161

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	1064371..1064871	501
join(1064371..1064871)

Literature and cross-references PangGPx01

DNA ref.	JGI genome: scaffold_3 (1064371..1064871)

Protein sequence: PangGPx01

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	166
PWM (Da):	19055.71
PI (pH):	8.77

Sequence 0
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MSKFYEFTVT DNKGKEFPFE NLKGQVVLVV NTASKCGFTK QYKELEEIYQ KYKDQGFVVI AFPCNQFGHQ EPGTDDQIVE FCSRNYGVDF PLMKKVDVNG PNASPVFEWL KREKPGLLGF
KGIKWNFEKF LIDRNGNVVR RYSSVKTPSK ISEDIESLLK EPKSAS*

Retrieve as FASTA

Remarks

Complete sequence from genomic (scaffold_3:1064371-1064871 (+)). Strain "NCYC 495 leu1.1"

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGTCAAAGT TTTACGAATT CACCGTCACC GATAATAAGG GAAAGGAGTT CCCATTTGAG AACCTCAAGG GCCAAGTCGT GCTTGTGGTG AACACTGCCT CCAAGTGTGG GTTCACCAAG CAGTACAAAG AGCTTGAAGA AATCTACCAG AAGTACAAGG ACCAAGGGTT TGTTGTTATT GCCTTCCCTT GCAACCAGTT CGGACATCAG GAGCCAGGAA CAGACGACCA GATCGTGGAG TTCTGCAGCA GAAACTATGG TGTGGACTTC CCATTGATGA AAAAGGTCGA CGTGAATGGT CCTAATGCGA GCCCCGTGTT CGAGTGGCTG AAGCGCGAAA AACCGGGTTT ACTAGGGTTC AAGGGTATCA AGTGGAATTT TGAGAAATTT TTGATCGACA GAAACGGAAA TGTGGTGCGC AGATACTCTT CTGTGAAAAC TCCGTCCAAG ATTTCCGAAG ACATCGAGAG CTTGCTCAAA
GAGCCAAAAA GTGCGTCCTA A

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA