Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
238 |
PWM (Da): |
27121.84 |
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PI (pH):
| 9.84 |
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Sequence 280
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MYLLYLSCPMPRSIPPSVFKSCLRPPSTSPLPTSRYLFTHWLFAPSTTSFHHRLPRHRLSYRRALFTSATMSSATTFYDFTPKDKRGQQFPLSDLRGKVVLVVNTASKCGFTPQFEGLEKLYKELKPKHDDFEIIGFPCNQFGGQDPGSDDEIQSFCQLNYGVTFPVLGKTNVNGDNAEPVWEWMKSEKPGLLGLRRIKWNFEKFLIGRDGHVKQRWASTSAPEKVQKDILAALNEKA* |
Retrieve as FASTA
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Remarks |
Complete sequence from genomic (scaffold_39, 1 intron). Incorrect prediction from JGI (5' end is missing). |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGTACCTACTCTACCTATCATGCCCCATGCCTCGCAGTATTCCACCTTCTGTCTTCAAGTCCTGCCTCCGCCCGCCTTCCACCTCTCCATTACCTACTTCTAGGTACCTATTCACCCAC TGGTTGTTCGCACCGTCGACCACCAGCTTCCACCACCGCCTCCCTCGCCACCGCCTCTCTTACCGCCGTGCACTTTTCACATCCGCCACCATGTCGTCCGCGACCACCTTCTACGACTTC ACACCCAAGGACAAGCGGGGTCAGCAGTTCCCGCTGTCCGACCTGCGGGGCAAGGTTGTGCTGGTCGTCAATACCGCATCCAAGTGCGGCTTCACGCCCCAGTTTGAGGGTCTTGAAAAA CTCTACAAAGGTGAGTACCAGCTCAGGTCACAAACGTTGTATAGGTACCTCCTACCCGAGAGGTACCTCCAGGAGGATCAGATGAACGCCACCCGCTGACGCACGCTTCCGCCACAGAAC TGAAGCCTAAGCACGACGACTTCGAGATCATCGGGTTTCCCTGCAACCAGTTCGGTGGTCAAGACCCCGGCAGCGACGACGAGATTCAGAGCTTCTGTCAGCTCAACTACGGCGTCACCT TCCCCGTCCTAGGCAAGACCAATGTCAACGGCGACAATGCCGAGCCCGTGTGGGAGTGGATGAAGTCGGAGAAGCCGGGACTGTTGGGTCTGAGGCGGATCAAGTGGAACTTTGAGAAGT TCTTGATCGGAAGAGATGGACACGTCAAGCAGCGATGGGCGAGCACCTCTGCACCGGAGAAGGTCCAGAAAGATATTCTGGCTGCCTTGAACGAGAAGGCTTGA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGTACCTACTCTACCTATCATGCCCCATGCCTCGCAGTATTCCACCTTCTGTCTTCAAGTCCTGCCTCCGCCCGCCTTCCACCTCTCCATTACCTACTTCTAGGTACCTATTCACCCAC TGGTTGTTCGCACCGTCGACCACCAGCTTCCACCACCGCCTCCCTCGCCACCGCCTCTCTTACCGCCGTGCACTTTTCACATCCGCCACCATGTCGTCCGCGACCACCTTCTACGACTTC ACACCCAAGGACAAGCGGGGTCAGCAGTTCCCGCTGTCCGACCTGCGGGGCAAGGTTGTGCTGGTCGTCAATACCGCATCCAAGTGCGGCTTCACGCCCCAGTTTGAGGGTCTTGAAAAA CTCTACAAAGAACTGAAGCCTAAGCACGACGACTTCGAGATCATCGGGTTTCCCTGCAACCAGTTCGGTGGTCAAGACCCCGGCAGCGACGACGAGATTCAGAGCTTCTGTCAGCTCAAC TACGGCGTCACCTTCCCCGTCCTAGGCAAGACCAATGTCAACGGCGACAATGCCGAGCCCGTGTGGGAGTGGATGAAGTCGGAGAAGCCGGGACTGTTGGGTCTGAGGCGGATCAAGTGG AACTTTGAGAAGTTCTTGATCGGAAGAGATGGACACGTCAAGCAGCGATGGGCGAGCACCTCTGCACCGGAGAAGGTCCAGAAAGATATTCTGGCTGCCTTGAACGAGAAGGCTTGA |
Retrieve as FASTA
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