View Redoxidase 10026

Entry information : DsGPx01

Entry ID	10026
Creation	2011-12-21 (Passaia GisÃ¨le)
Last sequence changes	2011-12-21 (Passaia GisÃ¨le)
Sequence status	complete
Reviewer	Christophe Dunand
Last annotation changes	2016-02-29 (Christophe Dunand)

Peroxidase information: DsGPx01

Name

DsGPx01

Class

Fungi-Bacteria glutathione peroxidase [Orthogroup: Gpx3001]

Taxonomy

Eukaryota Fungi Basidiomycota Agaricomycetes Polyporaceae Dichomitus

Organism

Dichomitus squalens [TaxId: 114155 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	DsGPx01 start..stop	S start..stop
GsppGPx01	349	1.71e-123	22..238	12..234
ParcGPx01	318	3e-112	77..238	1..162
TvGPx01	305	3.16e-106	24..238	7..230
FhepGPx01	292	2.95e-102	77..237	1..161

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	1571446..1571786	339	N° 2	1571283..1571373	89	N° 3	1570994..1571167	172	N° 4	1570746..1570853	106
complement(join(1570746..1570853,1570994..1571167,1571283..1571373,1571446..1571 786))

Literature and cross-references DsGPx01

DNA ref.	JGI genome: scaffold_4 (1571786..1570746)

Protein sequence: DsGPx01

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	237 (384)
PWM (Da):	26440.68 (41904.9)
PI (pH):	10.01 (7.09)	Peptide Signal:	cut: 21 range:21-404

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MRMPPVTTAWSTVSASSVFSWARPISHKSSLVRVQTPLPRSQRSRLLSQLLYQVSGPVPSRPTASSYRTLFTTPPAMSDAGFYSLKATAPGNKTYDFEQLRGKVVLIVNVASKCGFTPQY
KGLEALYKKYKDQGFIILGFPCNQFGGQEPENDEKIAEFCELNHGVTFPLMAKSDVNGDNTNEVYKWLKSQKAGLLGLTRIKWNFEKFLIDREGKVVHRWASTTSPEAIDAEVAKLL*

Retrieve as FASTA

Remarks

Complete sequence from genomic (scaffold_4, 3 introns).

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGCGCATGCCACCGGTCACGACGGCATGGTCCACCGTCTCTGCTTCGTCAGTCTTCTCTTGGGCTCGTCCAATCTCACATAAGTCGTCCCTCGTTCGTGTTCAGACCCCTCTCCCACGT
TCTCAGCGCTCCCGTCTGCTCTCCCAGCTCTTATATCAGGTATCTGGTCCCGTTCCCTCACGACCAACTGCCTCTTCCTATCGCACCCTCTTCACGACCCCGCCAGCCATGTCCGACGCC
GGTTTCTACTCGCTCAAGGCGACTGCTCCCGGAAACAAGACGTATGACTTTGAGCAACTCAGGGGCAAGGTCGTCCTCATCGTGAACGTCGCGTCCAAGTGGTACGCGCACCCGCTTCTT
GCAGTCTTTGGAGGAGATAGCTCACCGCAAGCATGTTCACTTGTCGTGCGCAGTGTGGCTTCACGCCCCAGTACAAGGGCCTTGAAGCTCTGTACAAGAAGTACAAGGACCAGGGCTTCA
TCATCCTCGGCTTCCCGTGCAACCAGGTACGTCCCGGCAACCCTCAGCCATCCCGCCCCCACTCATCCAGACCGCACGTACCCATCTTTGCCTACTCTGTCCCCGTCGCCCTGCGCCCTC
GCACCCCGCGTCGCGCTCCAGTTTTCGGCGGCCAGGAGCCCGAGAACGACGAGAAGATCGCCGAGTTTTGCGAGCTCAACCACGGCGTCACCTTCCCGCTCATGGCCAAGTCCGACGTCA
ACGGCGATAACACGAACGAGGTCTACAAGTGGCTCAAGTCGCAGAAGGCCGGCCTCCTCGGCCTCACCCGCATCAAGGTGCGTTCTCCCCCTCCAGTCTCCCCTTCTGATCCCATCCCAT
CCCATCCCATCCCATCCCATTGCATTGCCCGGACGGGGGCACTTCGATATCCTCTCCTTGTACGCGGATCGCTTACTCTCCCCTTCCCCCCTTCTAGTGTGGAACTTCGAGAAGTTCCTG
ATCGACCGCGAGGGCAAGGTCGTCCACCGCTGGGCCTCGACCACCTCCCCCGAGGCGATCGACGCGGAGGTCGCCAAGCTCCTCTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA