Entry information : CsPrx[P]72
Entry ID 10045
Creation 2011-11-25 (Qiang LI)
Last sequence changes 2012-01-04 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Qiang Li
Last annotation changes 2017-12-14 (Qiang Li)
Peroxidase information: CsPrx[P]72
Name CsPrx[P]72
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Rutaceae Citrus
Organism Citrus sinensis    [TaxId: 2711 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CsPrx[P]72
start..stop
S start..stop
CsPrx[P]67 96 1.19e-28 1..53 15..67
CclPrx101 71 3.54e-17 5..50 90..149
CsPrx35 70 1.29e-16 5..50 90..149
ThasPrx18 69 2.01e-16 5..50 104..163
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '10045' 'complement(join(130530..130580,130708..130815))' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 130708..130815 106 N° 2 130530..130580 49  
complement(join(130530..130580,130708..130815))


exon

Literature and cross-references CsPrx[P]72
DNA ref. Phytozome 12:   scaffold00248 (130815..130530)
Protein sequence: CsPrx[P]72
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   52
PWM (Da):   %s   5903.03  
PI (pH):   %s   9.17
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
KRGTNARPNRNSTQGYEVIDNIKAEVEKACPLTISYSEEPYWPIRLGRRD*LI

Retrieve as FASTA  
Remarks Pseudogene from genomic. No prediction from phytozome (very short PS).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
AAGAGGGGGACAAACGCTCGGCCAAATCGTAATTCAACTCAAGGATATGAAGTTATTGACAACATAAAAGCAGAAGTTGAAAAAGCTTGCCCATTAACTATATCTTATGCTGATATCAAT
TTTGGCTCTTGCAGCCAGAGAGGCTGTTGTGCTGGTGATTATAGTCTCAGAACTCAAGTCAAAAGAACTCTTTCTTCAACTGACTTTCCATTACATATAATCTGGTTTAATTTAGTCTCA
GAAGAGCCCTACTGGCCAATTCGATTAGGCCGTAGAGATTGATTAATT

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
AAGAGGGGGACAAACGCTCGGCCAAATCGTAATTCAACTCAAGGATATGAAGTTATTGACAACATAAAAGCAGAAGTTGAAAAAGCTTGCCCATTAACTATATCTTATTCAGAAGAGCCC
TACTGGCCAATTCGATTAGGCCGTAGAGATTGATTAATT

Retrieve as FASTA