Entry information : MtPrx[P]113 (Medtr6g048160.1[4.0] / Medtr4g066810[3.5])
Entry ID 10053
Creation 2011-11-25 (Qiang LI)
Last sequence changes 2014-07-31 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Catherine Mathe
Last annotation changes 2016-04-07 (Catherine Mathe)
Peroxidase information: MtPrx[P]113 (Medtr6g048160.1[4.0] / Medtr4g066810[3.5])
Name (synonym) MtPrx[P]113 (Medtr6g048160.1[4.0] / Medtr4g066810[3.5])
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Medicago
Organism Medicago truncatula (barrel medic)    [TaxId: 3880 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MtPrx[P]113
start..stop
S start..stop
MtPrx06 209 5e-69 1..123 1..132
GmPrx05 178 7e-57 2..123 3..132
MtPrx[P]06 176 3e-56 1..123 1..122
GmPrx170 175 8e-56 4..122 5..131
Literature and cross-references MtPrx[P]113 (Medtr6g048160.1[4.0] / Medtr4g066810[3.5])
DNA ref. Phytozome 12:   chr4 (17373783..17374162)
Cluster/Prediction ref. Phytozome Gene 12:   31105234 [Incorrect prediction]
Protein sequence: MtPrx[P]113 (Medtr6g048160.1[4.0] / Medtr4g066810[3.5])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   123 (99)
PWM (Da):   %s   12739.47 (10160.0)  
PI (pH):   %s   5.56 (4.96) Peptide Signal:   %s   cut: 25 range:25-123
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MEGSLFKVVF LLLVLGIVNT LVHGQGKRVG FYSNTCSQVN SDSSLAPGDL LRMHFLxHDC FVQGCDASVV IAGSGSEKTA FPNLGLRGFE VIDDAKTKLE TACPGVVSCA DIVTLAARDS 
VVL 

Retrieve as FASTA  
Remarks Pseudogene from genomic (3' end is missing; Gap in frame). Incorrect prediction from Phytozome.
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGAGGGTA GTTTGTTTAA GGTTGTGTTT CTTTTACTTG TTTTGGGTAT TGTGAACACA TTAGTGCATG GACAAGGGAA ACGTGTAGGA TTCTATTCAA ATACATGTTC TCAACGTTAA  CTCTGATTCT TCTTTGGCTC CTGGTGATCT ACTTAGGATG CACTTCCTTC nnCACGATTG CTTTGTCCAA GGTTGTGATG CATCTGTTGT CATTGCCGGC TCGGGCTCCG AGAAAACAGC  ATTTCCAAAC CTTGGTTTAA GAGGTTTTGA AGTAATTGAT GATGCTAAGA CAAAACTCGA GACTGCATGT CCCGGTGTTG TCTCTTGTGC TGATATTGTT ACCCTTGCTG CTCGTGATTC 
CGTTGTTTTG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGAGGGTA GTTTGTTTAA GGTTGTGTTT CTTTTACTTG TTTTGGGTAT TGTGAACACA TTAGTGCATG GACAAGGGAA ACGTGTAGGA TTCTATTCAA ATACATGTTC TCAAGTTAAC  TCTGATTCTT CTTTGGCTCC TGGTGATCTA CTTAGGATGC ACTTCCTTCn nCACGATTGC TTTGTCCAAG GTTGTGATGC ATCTGTTGTC ATTGCCGGCT CGGGCTCCGA GAAAACAGCA  TTTCCAAACC TTGGTTTAAG AGGTTTTGAA GTAATTGATG ATGCTAAGAC AAAACTCGAG ACTGCATGTC CCGGTGTTGT CTCTTGTGCT GATATTGTTA CCCTTGCTGC TCGTGATTCC 
GTTGTTTTG 

Retrieve as FASTA