Entry information : MtPrx[P]117 ( Medtr4g114220.1 [4.0])
Entry ID 10058
Creation 2011-11-25 (Qiang LI)
Last sequence changes 2016-04-13 (Catherine Mathe)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-04-13 (Christophe Dunand)
Peroxidase information: MtPrx[P]117 ( Medtr4g114220.1 [4.0])
Name (synonym) MtPrx[P]117 ( Medtr4g114220.1 [4.0])
Class Class III peroxidase     [Orthogroup: Prx005]*
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Medicago
Organism Medicago truncatula (barrel medic)    [TaxId: 3880 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MtPrx[P]117
start..stop
S start..stop
MtPrx66 225 8e-75 1..127 1..127
LaPrx10 199 6e-67 3..127 4..128
GmPrx320 202 7e-66 5..127 5..127
PtPrx78 199 1e-64 8..127 9..128
Literature and cross-references MtPrx[P]117 ( Medtr4g114220.1 [4.0])
DNA ref. Phytozome 12:   chr8 (47053310..47052252)
Cluster/Prediction ref. Phytozome Gene 12:   31115081 [Incorrect prediction]
Protein sequence: MtPrx[P]117 ( Medtr4g114220.1 [4.0])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   165 (146)
PWM (Da):   %s   17596.2 (15458.0)  
PI (pH):   %s   6.23 (6.23) Peptide Signal:   %s   cut: 20 range:20-165
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MIVRLGSLVI LVMTLAVEAQ LKSGF*SNSC PTAAPILRST VVSYFNKDPT IDPGLLRFHF HDCFVQGCDG SILITGSSSE RNALPNLGLR GFEVIDNAKS QIEAICPGVV SCADILALAA 
RDAVNLNVEG GLQDHQSLRP AMKNVILMLE GLKDIPVPPS PARLLE* 

Retrieve as FASTA  
Remarks Pseudogene from genomic (stops in frame; 3' end is missing).
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGATTGTGC GATTGGGATC CCTAGTGATT TTGGTGATGA CTTTGGCAGT TGAAGCCCAA CTGAAAAGTG GGTTTTAATC AAATTCATGT CCAACAGCTG CGCCCATCTT ACGGTCCACA  GTTGTATCTT ACTTTAACAA AGATCCAACC ATTGATCCAG GCCTGCTCAG GTTTCATTTC CATGATTGCT TTGTCCAAGT AAGCTAAGTG TATGTTTGTT TGGATTGGTG GTGAGTTCGA  AAAAATTACG ATGACATTGG TTCTATATAT AGTTTTTTCT TTTACAAAGG TTATATAGTT TTTATAATTT GAATCTCCTA AGGAATATGC ATGTTAGTTA AAAATTGTAA TAGTTAAAAC  TGTAAAAAAA TAAATGATTA CATAGGTAAA TTATGAAATT ATTGAAAGCT ATATTGTTGA ATTTCCGATT AACTATACGA GTATATCATA ATTGGTAAAC TTTTTTACTT AAAACACTAG  TTGATGACTA CACATTACTG TATTAATTTA TTTTGATATG CAAATTTAAA GTCATTTGAA ATTATCTCTC CCACTCCCAC AGGGCTGCGA TGGATCCATA TTGATTACAG GTTCTTCTTC  AGAAAGGAAT GCATTACCAA ACCTTGGTCT AAGAGGGTTT TTTTTTTTTT TTTTTTTTTT TTTGTAAACA TGGTCTAACG TTTTGAAGTG ATAGATAATG CAAAATCACA AATAGAGGCC  ATATGCCCCG GAGTTGTCTC ATGTGCTGAC ATCCTAGCAT TGGCAGCCCG TGATGCTGTC AATTTGGTAT TAAAGCAATC TTAAAACTTA CTCAAACTCA CTCTACCACA CACGCGCGCT  CACACACAAT ACATTGTGTT TTTGAAGGAA CCATGATAAA ATCAATAAGC TTTTCAGACA TAATGAGAAA TACGTGGATT GGAAGGTATT GGAAAGAATG TTGAAGGTGG GTTGCAAGAC 
CACCAATCTC TCCGTCCTGC AATGAAGAAT GTAATCTTGA TGTTGGAAGG TTTGAAAGAT ATTCCGGTTC CTCCCTCTCC AGCTCGCTTG CTTGAGTAG 

Retrieve as FASTA