RedOxiBase: View Perox 10073

Entry information : CrevGPx01

Entry ID	10073
Creation	2012-01-04 (Passaia GisÃ¨le)
Last sequence changes	2012-01-04 (Passaia GisÃ¨le)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2012-05-07 (Catherine Mathe (Scipio))

Peroxidase information: CrevGPx01

Name

CrevGPx01

Class

Fungi-Bacteria glutathione peroxidase [Orthogroup: Gpx3001]

Taxonomy

Eukaryota Fungi Kickxellaceae Coemansia

Organism

Coemansia reversa [TaxId: 61392 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	CrevGPx01 start..stop	S start..stop
PcarGPx01	227	2e-76	85..240	7..162
BaGPx01	229	2e-76	32..240	1..213
RsolGPx01	226	6e-76	85..240	4..159
PcGPx	224	2e-75	84..240	3..159

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	237694..238425	732
complement(join(237694..238425))

Literature and cross-references CrevGPx01

DNA ref.	JGI genome: scaffold_11 (238425..237694)

Protein sequence: CrevGPx01

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	244
PWM (Da):	27119.78
PI (pH):	10.04

Sequence 0
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MAQQLQNRIR AGVTSRVFKA ATSSLFFFSS FLRAKHFVNS TSVIPVQHRF YTKSKSTMAG DNSAPAASSS SSSASGAGVN SNDDFYKLNF KTLSGQDYPF EQLRGKVVLI ANVASKCGFT PQYKGLEALN KKYAEKGLVV LGFPTNQFGH QEPGSSEEIQ EFCQKNYGVT FTIMEKSDVN GEKENEVFKF IKAARPGLLG MKRIKWNFEK FLIDRHGNVV NRWSSVTAPK DIEEDIEKTL
SQGQ*

Retrieve as FASTA

Remarks

Complete sequence from genomic (scaffold_11:237576-238435 (-), NO intron)NO EST. Strain "NRRL 1564".

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCCCAGC AGCTACAGAA TAGGATTAGG GCGGGTGTTA CTTCACGGGT ATTCAAAGCT GCGACATCCA GTTTGTTCTT CTTTTCATCT TTTCTAAGAG CAAAACATTT TGTGAATTCT ACTTCAGTAA TTCCTGTTCA GCATCGCTTC TATACTAAAA GCAAATCAAC CATGGCCGGA GATAATTCCG CACCCGCAGC ATCTTCTTCC TCCTCCTCTG CGTCCGGAGC CGGAGTTAAT AGTAACGATG ATTTTTATAA GCTCAATTTT AAGACGCTTT CTGGACAGGA CTATCCATTT GAGCAGCTTC GCGGAAAGGT AGTGCTTATA GCGAATGTTG CATCAAAGTG TGGATTTACA CCACAGTATA AGGGCTTGGA AGCGTTGAAC AAGAAGTATG CAGAAAAAGG ACTGGTCGTT TTAGGATTTC CAACAAACCA GTTTGGACAT CAGGAGCCTG GGTCTTCTGA GGAGATCCAA GAGTTTTGCC AGAAGAACTA TGGCGTGACT TTTACAATCA TGGAAAAGTC AGACGTTAAT GGTGAAAAGG AGAACGAAGT ATTCAAGTTT ATAAAAGCGG CGAGGCCTGG TCTTCTTGGA ATGAAGCGGA TCAAGTGGAA TTTTGAAAAG TTTCTGATTG ACCGTCATGG TAACGTCGTC AACCGCTGGT CTTCTGTCAC GGCACCCAAG GATATTGAAG AGGACATTGA GAAAACGCTT
TCTCAAGGTC AG

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA