Entry information : VvPrx[P]70
Entry ID 10080
Creation 2012-01-05 (Qiang LI)
Last sequence changes 2012-01-05 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-01-17 (Christophe Dunand)
Peroxidase information: VvPrx[P]70
Name VvPrx[P]70
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Vitaceae Vitis
Organism Vitis vinifera (Grape)    [TaxId: 29760 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value VvPrx[P]70
start..stop
S start..stop
VvPrx[P]74 146 1.63e-48 1..77 1..77
VvPrx92 143 3.64e-47 1..77 3..79
VvPrx[P]73 140 6.25e-46 1..77 3..80
VvPrx[P]100 128 2.95e-41 1..77 1..77
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '10080' 'join(7421836..7422069)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 7421836..7422069 232  
join(7421836..7422069)


exon

Literature and cross-references VvPrx[P]70
DNA ref. Phytozome 12:   chr19 (7421836..7422069)
Protein sequence: VvPrx[P]70
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   77
PWM (Da):   %s   8296.06  
PI (pH):   %s   4.3
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

EIISTKEIND PTTAIATLRL FFHDCMVEGY DTSVLIFSNS FNTAQHDADI NLSLPGNTVS IHPDCTSLAS LVISHHS 

Retrieve as FASTA  
Remarks Pseudogene from genomic (Short PS). No prediction from phytozome.
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GAGATCATAA GCACCAAGGA AATCAACGAC CCCACCACAG CTATTGCCAC TCTCCGCCTC TTCTTCCACG ACTGCATGGT CGAAGGCTAC GACACCTCAG TCCTCATCTT CTCCAACTCC 
TTCAACACCG CCCAGCACGA CGCCGACATC AACCTCTCCC TCCCAGGCAA TACTGTATCA ATACATCCAG ATTGTACGAG TCTTGCCTCT CTAGTCATCA GTCATCATTC ATGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GAGATCATAA GCACCAAGGA AATCAACGAC CCCACCACAG CTATTGCCAC TCTCCGCCTC TTCTTCCACG ACTGCATGGT CGAAGGCTAC GACACCTCAG TCCTCATCTT CTCCAACTCC 
TTCAACACCG CCCAGCACGA CGCCGACATC AACCTCTCCC TCCCAGGCAA TACTGTATCA ATACATCCAG ATTGTACGAG TCTTGCCTCT CTAGTCATCA GTCATCATTC ATGA 

Retrieve as FASTA