Entry information : VvPrx[P]73
Entry ID 10083
Creation 2012-01-05 (Qiang LI)
Last sequence changes 2012-01-05 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-01-17 (Christophe Dunand)
Peroxidase information: VvPrx[P]73
Name VvPrx[P]73
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Vitaceae Vitis
Organism Vitis vinifera (Grape)    [TaxId: 29760 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value VvPrx[P]73
start..stop
S start..stop
VvPrx[P]74 150 6e-50 3..80 1..77
VvPrx92 148 3e-49 1..80 1..79
VvPrx[P]70 140 6e-46 3..80 1..77
VvPrx[P]100 136 3e-44 3..80 1..77
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 11860076..11860318 243  
complement(join(11860076..11860318))


exon

Literature and cross-references VvPrx[P]73
DNA ref. Phytozome 12:   chr5 (11860318..11860076)
Protein sequence: VvPrx[P]73
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   80
PWM (Da):   %s   8633.22  
PI (pH):   %s   4.86
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MREIIRSTKE INDPTIATAT LRLFFHDCMV EGYDASVLIS SNSFNTAQHD ADINLSLPGN TVSIHPDCTS LASPVISHHS 

Retrieve as FASTA  
Remarks Pseudogene from genomic (Short PS). No prediction from phytozome.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCGGGAGA TCATAAGAAG CACCAAGGAA ATCAACGACC CCACCATAGC TACTGCCACT CTCCGCCTCT TCTTCCACGA CTGCATGGTC GAAGGCTACG ACGCCTCAGT CCTCATCTCC  TCCAACTCCT TCAACACCGC CCAGCACGAT GCCGACATCA ATCTCTCCCT CCCAGGCAAT ACTGTATCAA TACATCCAGA TTGTACGAGT CTTGCCTCTC CAGTCATCAG TCATCATTCA 
TGA 

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCGGGAGA TCATAAGAAG CACCAAGGAA ATCAACGACC CCACCATAGC TACTGCCACT CTCCGCCTCT TCTTCCACGA CTGCATGGTC GAAGGCTACG ACGCCTCAGT CCTCATCTCC  TCCAACTCCT TCAACACCGC CCAGCACGAT GCCGACATCA ATCTCTCCCT CCCAGGCAAT ACTGTATCAA TACATCCAGA TTGTACGAGT CTTGCCTCTC CAGTCATCAG TCATCATTCA 
TGA 

Retrieve as FASTA