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Entry information : VvPrx[P]100
Entry ID 10085
Creation 2012-01-05 (Qiang LI)
Last sequence changes 2012-01-05 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-01-17 (Christophe Dunand)
Peroxidase information: VvPrx[P]100
Name VvPrx[P]100
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Vitaceae Vitis
Organism Vitis vinifera (Grape)    [TaxId: 29760 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value VvPrx[P]100
start..stop		 S start..stop
VvPrx[P]74 138 2.53e-45 1..77 1..77
VvPrx[P]73 136 2.76e-44 1..77 3..80
VvPrx92 131 1.89e-42 1..77 3..79
VvPrx[P]70 128 2.95e-41 1..77 1..77
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '10085' 'join(16523089..16523319)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 16523089..16523319 229  
join(16523089..16523319)


exon

Literature and cross-references VvPrx[P]100
DNA ref. Phytozome 12:   chr10 (16523089..16523319)
Protein sequence: VvPrx[P]100
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   76 (384)
PWM (Da):   %s   8159.01 (41933.9)  
PI (pH):   %s   4.48 (7.46) Peptide Signal:   %s   cut: 21 range:21-404
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

EIISTKEINV PTIATATLRL FFHDCMVEGY DASVLISSNS FNTT*HDADI NLSFPSNTVS IHPDCTSLAS PVISRHS 

Retrieve as FASTA  
Remarks Pseudogene from genomic (Short PS with stop in it). No prediction from phytozome.
DNA ►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GAGATCATAA GCACCAAGGA AATCAACGTC CCTACCATAG CTACTGCCAC TCTTCGCCTC TTCTTCCACG ACTGCATGGT CGAAGGCTAC GATGCCTCAG TCCTCATCTC CTCCAACTCC 
TTCAACACTA CCTAGCACGA CGCCGACATC AACCTCTCCT TCCCAAGCAA TACTGTATCA ATACATCCAG ATTGTACGAG TCTTGCCTCT CCAGTCATCA GTCGTCATTC A 

Retrieve as FASTA  
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GAGATCATAA GCACCAAGGA AATCAACGTC CCTACCATAG CTACTGCCAC TCTTCGCCTC TTCTTCCACG ACTGCATGGT CGAAGGCTAC GATGCCTCAG TCCTCATCTC CTCCAACTCC 
TTCAACACTA CCTAGCACGA CGCCGACATC AACCTCTCCT TCCCAAGCAA TACTGTATCA ATACATCCAG ATTGTACGAG TCTTGCCTCT CCAGTCATCA GTCGTCATTC A 

Retrieve as FASTA