Entry information : VvPrx103
Entry ID 10088
Creation 2012-01-05 (Qiang LI)
Last sequence changes 2016-01-17 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Achraf Jemmat
Last annotation changes 2016-01-17 (Achraf Jemmat)
Peroxidase information: VvPrx103
Name VvPrx103
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Vitaceae Vitis
Organism Vitis vinifera (Grape)    [TaxId: 29760 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value VvPrx103
start..stop
S start..stop
VvPrx07 161 6e-51 3..103 161..293
VhPrx03 145 1e-46 3..103 10..142
VvPrx07_muscat 148 2e-46 3..103 100..232
VvPrx21 145 2e-44 3..103 160..292
Literature and cross-references VvPrx103
DNA ref. Phytozome 12:   chr18 (5109550..5110250)
Protein sequence: VvPrx103
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   104
PWM (Da):   %s   11288.63  
PI (pH):   %s   4.97
Sequence
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Send to Peroxiscan
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SVLPGPTLNL SQLVSAFSNK GFTTKETVVL SGICPRSGGD DNLSPLDKTT TVFYYAYFRD LKEKKGLLHS DQQLYNDGST DSIVESYSIN SATFFRDVTN AMVL 

Retrieve as FASTA  
Remarks Partial sequence from genomic (3' end is missing). No prediction from phytozome.
DNA
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ATGGCTTCCC TCTCCTTGTT TTCCTTATTC TGTATGTTTT CGTTTCTATT GGGGATGGCA CATGCACAGC TATCTTCCGA CTACTACTCA AGTTCATGCC CTAGCGCTCT GTCTACCATT  CAAACTGCAG TAAACAATGC AGTGGCTGAC GAGTCCCGCA TGGGGGCCTC ACTGCTCCGC CTTCATTTCC ATGATTGCTT TGTATTGGCA AGTCTTTCTC CACATATATT TAGCTCCATT  TTTCTGGATA TTCTGTTTTT TACTACTTGT TCTGGTTGCT TCTGACCAGC TCTCCAATTT AGGTTTGAAA TCCAGAAGTC AACCGGATCA TTTGGTACTG GTTGAGCTTT AAGATGTTAA  TAAACCTCAG TCAATCCCTT CATAAAGAGA AAAATATTAG TAACATGCAT GCACACATAC AGCTGTTTGA CAGGAAAATG CGTACTAACA ACATCTTCAT GTATAAATTC AACAGGGATG  TGATGCTTCT ATATTATTGG ATGACACTGC AAACTTTACT GGAGAGAAGA CAGCAGGACC AAATAATAAC TCTGTGAGAG GATATGATGT GATCGACACC ATTAAATCTC AAATGGAAAG 
CTTGTGCCCT GGAGTTGTTT CTTGTGCAGA TATTGTAGCT GTGGCAGCTC GTGACTCTGT TGTTGCT 

Retrieve as FASTA  
CDS
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ATGGCTTCCC TCTCCTTGTT TTCCTTATTC TGTATGTTTT CGTTTCTATT GGGGATGGCA CATGCACAGC TATCTTCCGA CTACTACTCA AGTTCATGCC CTAGCGCTCT GTCTACCATT  CAAACTGCAG TAAACAATGC AGTGGCTGAC GAGTCCCGCA TGGGGGCCTC ACTGCTCCGC CTTCATTTCC ATGATTGCTT TGTATTGGGA TGTGATGCTT CTATATTATT GGATGACACT  GCAAACTTTA CTGGAGAGAA GACAGCAGGA CCAAATAATA ACTCTGTGAG AGGATATGAT GTGATCGACA CCATTAAATC TCAAATGGAA AGCTTGTGCC CTGGAGTTGT TTCTTGTGCA 
GATATTGTAG CTGTGGCAGC TCGTGACTCT GTTGTTGCT 

Retrieve as FASTA