RedOxiBase: View Perox 10093

Entry information : PtanGPx01

Entry ID	10093
Creation	2012-01-05 (Passaia GisÃ¨le)
Last sequence changes	2012-05-30 (Catherine Mathe)
Sequence status	complete
Reviewer	Christophe Dunand
Last annotation changes	2015-12-23 (Christophe Dunand)

Peroxidase information: PtanGPx01

Name

PtanGPx01

Class

Fungi-Bacteria glutathione peroxidase [Orthogroup: Gpx3001]

Taxonomy

Eukaryota Fungi Ascomycota Saccharomycetes Saccharomycetaceae Pachysolen

Organism

Pachysolen tannophilus [TaxId: 4918 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	PtanGPx01 start..stop	S start..stop
PpasGPx01	237	8e-82	1..161	1..161
AgoGPx	237	5e-81	1..159	27..185
WanoGPx02	234	1e-80	1..159	1..159
SkluGPx01	234	2e-80	1..160	12..171

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	1155993..1156478	486
complement(join(1155993..1156478))

Literature and cross-references PtanGPx01

DNA ref.	JGI genome: scaffold_2 (1156478..1155993)

Protein sequence: PtanGPx01

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	161
PWM (Da):	18491.5
PI (pH):	8.15

Sequence 0
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MSKFYELSAL DQKDQPFSFE QLKGKVVLIV NVASKCGFTP QYKELEQLYG KYKDQGFIIL GFPTSEFANQ EFENQEEIQN FCQLNYGVTF PIMKKTKVNG AEANSVYQYL KSQKAGILGF
RGIKWNFEKF LIDKEGNVVQ RYSSITTPLS FESTIKELLA K*

Retrieve as FASTA

Remarks

Complete sequence from genomic (scaffold_2, no intron). Strain="NRRL Y-2460".

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGTCGAAAT TTTATGAATT GTCTGCTTTA GATCAAAAGG ACCAACCGTT TTCTTTTGAA CAATTAAAGG GTAAAGTTGT ATTAATTGTT AACGTTGCAT CAAAATGTGG GTTTACACCA CAATATAAGG AATTAGAACA ATTATATGGT AAATATAAAG ATCAAGGTTT TATTATTTTG GGGTTCCCAA CTTCGGAATT TGCTAATCAA GAATTTGAAA ATCAGGAAGA AATTCAAAAT TTTTGTCAAT TAAATTATGG TGTTACTTTC CCTATTATGA AGAAAACTAA AGTTAATGGT GCTGAAGCTA ATTCAGTTTA TCAATATTTA AAATCTCAAA AAGCTGGTAT CTTGGGTTTC AGAGGTATTA AATGGAATTT TGAAAAATTC CTTATTGATA AAGAAGGAAA TGTCGTTCAA AGATATTCAT CAATTACTAC TCCTTTATCT TTTGAATCAA CTATCAAGGA ATTGTTAGCA
AAATAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA