View Redoxidase 10096

Entry information : SAcoGPx01

Entry ID	10096
Creation	2012-01-05 (Passaia GisÃ¨le)
Last sequence changes	2012-07-19 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2013-09-06 (Catherine Mathe (Scipio))

Peroxidase information: SAcoGPx01

Name

SAcoGPx01

Class

Fungi-Bacteria glutathione peroxidase [Orthogroup: Gpx3001]

Taxonomy

Eukaryota Fungi Ascomycota Saitoella

Organism

Saitoella complicata [TaxId: 5606 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	SAcoGPx01 start..stop	S start..stop
CangGPx01	244	1.23e-83	1..163	65..226
CzmGPx	241	1.74e-82	1..163	38..201
MpopGPx01	240	5.34e-82	1..159	61..220
NdisGPx01	238	5.96e-82	1..163	1..165

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	270830..270951	120	N° 2	270652..270770	117	N° 3	270458..270600	141	N° 4	270299..270406	106
complement(join(270299..270406,270458..270600,270652..270770,270830..270951))

Literature and cross-references SAcoGPx01

DNA ref.	JGI genome: scaffold_13 (270951..270299)
Cluster/Prediction ref.	JGI gene: 30557

Protein sequence: SAcoGPx01

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	163
PWM (Da):	18158.18	Transmb domain:	i12-34o
PI (pH):	5.01

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MSSAATFYDLPAPLDKKKQEFPLSDLKGKVVLVVNVASKCGFTPQYEGLEKIYQQYKDKDFAIIGFPCNQFGAQEPGSDEIQSFCQLNYGVSFPVLAKVDVNGSTSSPIYEWLKNQKSGF
MGLTRIWNFEKFLIGKDGNVVERYSSLSKPESIAEDIEKLL*

Retrieve as FASTA

Remarks

Complete sequence from genomic (3 introns) No EST. Strain="NRRL Y-17804".

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGTCTTCCGCCGCGACTTTCTACGATCTCCCCGCTCCTCTCGATAAGAAGAAGCAGGAGTTCCCTCTCTCTGATTTGAAGGGAAAGGTCGTGTTGGTTGTGAATGTTGCAAGCAAGTGC
GGGTATGACATATTGGGCGTATTATTCAGCCAGGACAGTGTCGCTGACGCACGTCGTACAGGTGTTCACCCCGCAATATGAAGGTCTCGAGAAGATCTACCAGCAGTACAAGGACAAGGA
TTTCGCTATCATTGGATTCCCTTGTAACCAGTTCGGTGCTCAGGAGCCCGGAAGCGATGAGGGTTTGTTCTTCTTCGTCGTCCGTCGTGCCTGTCAGCTGACAATGCTCGCAGAGAGATC
CAATCCTTCTGTCAATTGAACTACGGCGTTTCCTTCCCCGTTCTCGCCAAGGTCGACGTTAACGGCTCTACATCGTCTCCTATCTACGAGTGGTTGAAGAACCAGAAGTCTGGTTTCATG
GGTTTGACTAGGATTAAGATGAGTACCCCTTCCTCTGCAGACGTGAACGTCGGCTAACAGCATGTTTACTGTGGAACTTCGAGAAGTTCTTGATTGGTAAGGACGGAAATGTTGTCGAGC
GTTACTCTTCGTTGTCGAAGCCCGAGAGCATCGCGGAAGATATTGAGAAGTTGCTTTAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGTCTTCCGCCGCGACTTTCTACGATCTCCCCGCTCCTCTCGATAAGAAGAAGCAGGAGTTCCCTCTCTCTGATTTGAAGGGAAAGGTCGTGTTGGTTGTGAATGTTGCAAGCAAGTGC
GGGTTCACCCCGCAATATGAAGGTCTCGAGAAGATCTACCAGCAGTACAAGGACAAGGATTTCGCTATCATTGGATTCCCTTGTAACCAGTTCGGTGCTCAGGAGCCCGGAAGCGATGAG
GAGATCCAATCCTTCTGTCAATTGAACTACGGCGTTTCCTTCCCCGTTCTCGCCAAGGTCGACGTTAACGGCTCTACATCGTCTCCTATCTACGAGTGGTTGAAGAACCAGAAGTCTGGT
TTCATGGGTTTGACTAGGATTAAGTGGAACTTCGAGAAGTTCTTGATTGGTAAGGACGGAAATGTTGTCGAGCGTTACTCTTCGTTGTCGAAGCCCGAGAGCATCGCGGAAGATATTGAG
AAGTTGCTTTAA

Retrieve as FASTA