View Redoxidase 10099

Entry information : SpasGPx01

Entry ID	10099
Creation	2012-01-05 (Passaia GisÃ¨le)
Last sequence changes	2012-01-05 (Passaia GisÃ¨le)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2012-04-27 (Catherine Mathe (Scipio))

Peroxidase information: SpasGPx01

Name

SpasGPx01

Class

Fungi-Bacteria glutathione peroxidase [Orthogroup: Gpx3003]

Taxonomy

Eukaryota Fungi Ascomycota Saccharomycetes Spathaspora

Organism

Spathaspora passalidarum (Candida sp) [TaxId: 340170 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	SpasGPx01 start..stop	S start..stop
CduGPx04	231	3.03e-79	9..168	9..171
CparaGPx02	224	8.54e-76	9..168	30..189
CtanzGPx01	211	6.21e-71	9..168	15..174
ScaGPx02	195	5.73e-65	9..168	2..161

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	1398164..1398676	511
complement(join(1398164..1398676))

Literature and cross-references SpasGPx01

DNA ref.	JGI genome: scaffold_1 (1398676..1398164)

Protein sequence: SpasGPx01

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	170
PWM (Da):	19742.91
PI (pH):	8.07

Sequence
Send to BLAST
Send to Peroxiscan

*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MNKTIRHPSQ FYSFVIPDGN NNNIDFNQFR NKVVIIVNVA SLCGYTPQYK ELQQLYEKYH DRGLEILGFP CNQFGNQEPG DESNIASFCQ RHFGVTFPIM KKVYVNGDDE HELYTYLKGQ
VKGVLGFRGV RWNFEKFIVN RDGQTVARFT SIITPLQFET YIVTLLNQHS *

Retrieve as FASTA

Remarks

Complete sequence from genomic (scaffold_1:1398164-1398676 (-), No intron) No EST. Strain="NRRL Y-27907".

DNA ►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ATGAACAAAA CCATACGACA TCCATCTCAG TTTTACTCGT TTGTTATTCC TGATGGAAAC AACAACAACA TAGATTTTAA CCAATTCAGA AACAAAGTCG TCATAATAGT CAACGTGGCA AGTCTTTGCG GGTACACACC ACAATACAAA GAACTACAAC AGCTATACGA AAAGTATCAC GATCGGGGTT TGGAGATCTT GGGATTCCCA TGCAATCAAT TTGGGAATCA AGAACCAGGC GACGAATCAA ACATTGCAAG TTTCTGTCAG CGTCATTTCG GTGTTACTTT CCCCATTATG AAGAAAGTAT ATGTCAATGG TGACGATGAA CACGAATTAT ACACGTATTT AAAAGGACAG GTCAAGGGTG TGCTAGGATT CCGTGGCGTG CGATGGAATT TTGAAAAGTT TATCGTCAAT AGAGATGGCC AAACCGTAGC AAGATTTACT TCCATTATAA CACCATTACA GTTTGAAACT
TACATTGTAA CACTATTAAA CCAGCATAGC TAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

Retrieve as FASTA