View Redoxidase 101

Entry information : AtPrx20 (At2g35380 / PER20 / AtperoxP20 / ATP28a)

Entry ID	101
Creation	2006-02-02 (Filippo Passardi)
Last sequence changes	2015-06-02 (Christophe Dunand)
Sequence status	complete
Reviewer	Achraf Jemmat
Last annotation changes	2015-11-04 (Achraf Jemmat)

Peroxidase information: AtPrx20 (At2g35380 / PER20 / AtperoxP20 / ATP28a)

Name (synonym)

AtPrx20 (At2g35380 / PER20 / AtperoxP20 / ATP28a)

Class

Class III peroxidase [Orthogroup: Prx043]

Taxonomy

Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis

Organism

Arabidopsis thaliana [TaxId: 3702 ]

Cellular localisation

N/D

Tissue types

Callus
Mixed tissues
Roots

Inducer

Drought

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	AtPrx20 start..stop	S start..stop
AhalPrx14	667	0	1..336	1..336
AlyPrx20	653	0	1..336	1..336
CrubPrx116	645	0	1..336	1..337
CagraPrx24	642	0	1..336	1..337

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '101' 'join(14892636..14892860,14893070..14893261,14893365..14893958)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	14892636..14892860	223	N° 2	14893070..14893261	190	N° 3	14893365..14893958	592
join(14892636..14892860,14893070..14893261,14893365..14893958)

Literature and cross-references AtPrx20 (At2g35380 / PER20 / AtperoxP20 / ATP28a)

Protein ref.	UniProtKB: Q9SLH7
DNA ref.	Phytozome 12: Chr2 (14892636..14893958)
mRNA ref.	GenBank: NM_129090.3
Cluster/Prediction ref.	Phytozome Gene 12: 19643048 UniGene: At.89
Omic ref.	AtProteome: At2g35380 ATTED-II: At2g35380 e-FP Browser: At2g35380 ePlant: At2g35380 Genevestigator: At2g35380 TAIR: At2g35380

Protein sequence: AtPrx20 (At2g35380 / PER20 / AtperoxP20 / ATP28a)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	336 (312)
PWM (Da):	37840.37 (35125.8)	Transmb domain:	i7-24o
PI (pH):	5.11 (4.88)	Peptide Signal:	cut: 25 range:25-336

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MEIKQKKVWLSLIVLYAITTSVLGDFGEPLLKGFYKESCPLAEEI
VKHNIEVAVLKDPRMAASLLRLQFHDCFVLGCDASVLLDTHGDMLSEKQATPNLNSLRGFEVIDYIKYLLEEACPLTVSCSDILALAARDSVFLRGGPWWEVLLGRRDSLKASFAGANQFIPAPNSSLDSLIINFKQQGLNIQDLIALSG
AHTIGKARCVSFKQRIVQPNMEQTFYVDEFRRHSTFRRVLGSQCKDSSRDNELSPLDIKTPAYFDNHYFINLLEGRGLLISDNVLVSEDHEGEIFQKVWEYAVNQDLFFIDFVESMLKMG
NINVLTGIEGEIRENCRFVNI*

Retrieve as FASTA

Remarks

Complete sequence from genomic (chromo 2, intron 1 and 2), 5 cDNA and 7 ESTs.

Promoter►
Send to BLAST
Send to cis Analysis

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

AAAGGAATTC ACTTAGAGAG ATAAAGAAGA AGAAAATTCT TTACTTTGAT ATGAGACGCC ACTCGAATTT GAGACGGCCG AGCTGGGCCG ATGGTTTTGT ACGTGATCTC GACGGTGCCA TTGTTGGTTG AATCTGAGCT CAGCTCTTCG GTTGAATTCA TCATCTCACC ACGAATTGTA TGCAATCAAT GAGAAATTGA GGATTAGGGT TTCGAATTTG GGAATTGAAA AAAACAGAGT TTGTTTTCTC ACTTGCTACT TCTCCGATGA CGGAGAGTCG ACTTGAGTTT TCAATATTTT CATATCTGTC CTTACATATG TTTTTAATTC CACTTTTAAC CCCAAAGGTT TCAGAGAGTA TAAAAAACTC CAAAACATTG GAAAAGCAAT TGTAAGAGCT TCTGCGTCAA AAAGAAGGTT TGGGTTACAC TTTTCATACA CACCATATGC ATAGGATGAG GCCTTCAATT TCTGCCTTAC ATATCAAAAG ATAGAACACA CACACAAATA AAGCAAAGAA ACAGAATATC TTTGAGATCT CCTCTTTATT TGGAGAAGAC AAAACACAGA ACAAGAATTA GAAAGAAGGG AGAGAAAGCA AAAATGGCAC TAAGAATGTG GGCTTCTTCT ACAGCAAACG CTCTCAAGCT TTCTTCTTCT GTTTCCAAGT CTCATCTCTC TCCTTTCTCC TTCTCTAGAT GCTTCTCCAC AGGTGTTTGT AATTGTGTAT GTAGTTGTGT GTGCATAGCT TTATCTGAAA CTGTTGATGA ATGTCTCTGT TATTTTTTTA GTTTTGGAGG GTTTGAAGTA TGCAAATTCA CATGAGTGGG TTAAACATGA AGGCTCTGTT GCCACCATTG GCATCACTGC CCATGCTCAG GTTCTTATTT TTGTAATCTA AGTGTTAAAA TAGCTCAGAA ACTAGATAGA TGTCTCTTTG GACTTTTGGA GAATGGTTAT AAAGATAATG ATAGTTTTGT AAGATTATTG GCTGAAATGG GAGGAGAAAT GACATTGATG TTGCAGGACC ATTTAGGTGA AGTGGTGTTT GTTGAACTGC CAGAGGACAA TACTTCAGTG AGCAAAGAGA AAAGCTTTGG AGCAGTGGAG AGTGTGAAGG CAACAAGTGA GATCTTATCA CCAATCTCAG GTGAAATCAT TGAGGTTAAC AAGAAGCTCA CAGAATCACC TGGCTTGGTA CAGTTTTAAA GTCTTAAGGA AATTAAGTAA GTTACCACTC ATGTGACAAC ATATAAGCAA TGATTTGGCA ATTGTGTGTT GTTTAGATCA ACTCAAGCCC CTATGAAGAT GGTTGGATGA TCAAAGTGAA ACCAAGTAGC CCCGCGGAGT TGGAATCTTT GATGGGTCCA AAGGAATACA CCAAGTTCTG CGAGGAGGAA GATGCTGCTC ACTAGGAGGG TTTCTCTCTG TCTTTTATGT TCCAAGTTCT ATCAATTCTC ATGCTTGTTT TCTAAATTTG CATACACTCT ATGACCAACT TCACAAAATA AGAGTTCAAG AAGATGAAAC AGAGACCTAA CAAACACATT AAGATTTTTT CTTTCATATA TCTTGTTATC CTCAAAATGC ATTTACCATC ACCCCAAAAG CCAGTCCAAT AAAAAAGGTG ATCCTAATCA AAAATTATTA ATAAAAATTT GGTAACCTTA AAGATATAAC CATTACTTTA AAATAAATAA TTGGTCATAA GAAAAGAAAC TGGTCGTCCA AATATTACAA TCTGCTCCAT TATATTGAAA TCACGTATTC AAGCTCATAA GGCAAGTTAG GTCCCTATTG GTCAATTTGG TTGTATCTAC CGTTGACAAA ACTGTAACAT CCATTGTGGT AAAAATTGGG CATGAAAACA AACATAACGA CATATGATAA CATACAAGGA ACATAATATT AACGAAGCAC
ACACATGACA CGTATATATA TATTCATATG CACACAAACA CAGATAGAGA TGAACAGAAA CACATGACAT AACTTTCCAA

Retrieve as FASTA

Terminator +►
Send to BLAST
Send to cis Analysis

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

AATCAAACAT CAATCAATAC AAATTGTTTG CACTTCTTTT GGTCTTCCAA TAAGGCATCA ACTTCACAAA ACTCATTACA ACTTCGATAA GTTCCATTAT TTTCTCCATT ATAACAATGT CCAATTAAGT ATGATACAGG TCTGTTTGTT GGAATTGTTT CTGCTTAAGG CAAGTGAATT GTCAAAATAA TCTCAGCTTG TCATCTAAGC TGACAATTGA TAACTCCAAT TATTGAAGGA CTCTGTTTTG TTCCGAAGTA AAATATCCAA ATATTTCAAG GCATCAGTAG AAAACCTTTG AGAATTGTTT TTGCATTTAA AGTGAATAGA ACTGTGAACA AGTCAAATTA ATTAGTCAAG TGATTTCCAT TATGCACAAC TAGTAAAAAA ACAAAAAAAA ACATTCGGTA TATTTTCTGG GCATCAGATA ATCATAAAAG TTAGCATCAC ATAGAATCAG ACGCAAATTA CCCATGAAAT ATAATTTCAT CATATGCCCA GTAGAAAACA AAGAGAATCA AAAACCAAAT CCTTAAAATC GACAAGACAT TCGAATTGTA CAAAAACATA AAAGAGACTA TGAATCTGAG TATCAGTTCT CCAAGGTGAA TAAAACATCA ATGTAATTTC AGTAGTAAAT AACATCAATA TATGAGATTC ATCCTATACT CAGATTCAAA AGAAAACGAT TTTTTTAAGG ATACAAAAAC GAAATATTAA AATTGAAAAC AAGATTTTAA GGATTTTTAT TGTAGAGTCG ATCAGAACCT GTCGAGAACA CAATTACATC ACATATATCA GTGGATTGAC AGACCTGTGA ATTTCTATCG TCACCTCGAC TCATAAAAGT CCTTAAAAGA GTTTTTACAA AAATCCAAAA AAAACATGAA TTGAGGAAGA GATTAAGATC TAGAAAAGCT CAGAACTTCT TAGAGGGTTG TGTATTACCG TCAGCGATGG
ATTAACCATC TCTGGCACAC GATTTTTTCC TCACAGCTCT

Retrieve as FASTA

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGAGATCAAGCAGAAGAAAGTATGGCTTTCTTTAATTGTGCTTTATGCAATTACGACATCAGTTTTGGGGGACTTTGGAGAACCATTACTGAAGGGTTTCTACAAAGAGAGTTGCCCA
TTGGCAGAGGAAATCGTGAAGCATAACATCGAAGTTGCTGTTCTCAAAGATCCTCGTATGGCGGCTTCTCTTCTTCGTCTTCAGTTCCACGATTGCTTCGTCTTGTGGTCAGAAAATCAT
CCCTCTCTACTCTTTTAACTTCCTCATTTGTGAGGTTTTATAATTGTTCTCTCCGAGATGATAACTTTATCAAGTATTTTTGAGGCTCTAATTCTAGCATACTTCTTGAACGTTATTCGA
AATTTGCGTGTATGAGAGTGAGACTGTCTTATTGCGTCTATGTGATGTTCAGTTGCGGGATTTATTGTGGGTTTAGGGTTGTGATGCGTCTGTGCTCTTGGACACACATGGAGATATGTT
GAGTGAGAAACAAGCAACTCCAAATCTGAACTCTTTACGTGGATTTGAAGTAATCGATTACATTAAGTACCTCCTCGAAGAAGCTTGTCCTCTAACTGTCTCATGTTCCGATATCCTTGC
CTTGGCCGCTCGTGACTCAGTCTTCCTGTGGTAATTTCCCCCTTGCACTTTACTTCCTTAAGGCTCTTTCTGTTTAAATCGAAACCTATGTGGTCAGTTTCATTTAAACACAAATATTGT
TTGGTATCATCAGAGAGGTGGCCCATGGTGGGAAGTTTTGCTAGGGAGAAGAGACTCATTAAAGGCAAGTTTCGCCGGAGCAAACCAATTCATTCCAGCACCAAACTCCTCTCTCGACAG
CCTCATCATCAATTTCAAGCAACAAGGGCTCAACATTCAAGATCTCATCGCTCTTTCGGGTGCTCATACAATAGGTAAAGCGAGATGCGTGAGCTTCAAGCAACGCATTGTTCAACCAAA
CATGGAACAAACGTTCTACGTCGATGAGTTCAGAAGACACAGCACGTTCCGTCGAGTCCTAGGGTCACAATGCAAAGATTCAAGCCGAGACAACGAACTGTCTCCACTGGATATTAAGAC
ACCAGCTTACTTCGATAACCATTATTTCATCAATCTGTTAGAAGGGAGAGGGTTGTTGATTTCGGATAACGTTCTGGTCTCAGAAGATCATGAAGGAGAGATCTTTCAGAAAGTTTGGGA
ATATGCAGTTAATCAAGATCTTTTCTTCATAGATTTTGTGGAATCTATGTTAAAAATGGGTAATATTAATGTTCTTACAGGTATTGAAGGTGAAATTAGGGAGAATTGTAGATTTGTCAA
TATCTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGAGATCAAGCAGAAGAAAGTATGGCTTTCTTTAATTGTGCTTTATGCAATTACGACATCAGTTTTGGGGGACTTTGGAGAACCATTACTGAAGGGTTTCTACAAAGAGAGTTGCCCA
TTGGCAGAGGAAATCGTGAAGCATAACATCGAAGTTGCTGTTCTCAAAGATCCTCGTATGGCGGCTTCTCTTCTTCGTCTTCAGTTCCACGATTGCTTCGTCTTGGGTTGTGATGCGTCT
GTGCTCTTGGACACACATGGAGATATGTTGAGTGAGAAACAAGCAACTCCAAATCTGAACTCTTTACGTGGATTTGAAGTAATCGATTACATTAAGTACCTCCTCGAAGAAGCTTGTCCT
CTAACTGTCTCATGTTCCGATATCCTTGCCTTGGCCGCTCGTGACTCAGTCTTCCTGAGAGGTGGCCCATGGTGGGAAGTTTTGCTAGGGAGAAGAGACTCATTAAAGGCAAGTTTCGCC
GGAGCAAACCAATTCATTCCAGCACCAAACTCCTCTCTCGACAGCCTCATCATCAATTTCAAGCAACAAGGGCTCAACATTCAAGATCTCATCGCTCTTTCGGGTGCTCATACAATAGGT
AAAGCGAGATGCGTGAGCTTCAAGCAACGCATTGTTCAACCAAACATGGAACAAACGTTCTACGTCGATGAGTTCAGAAGACACAGCACGTTCCGTCGAGTCCTAGGGTCACAATGCAAA
GATTCAAGCCGAGACAACGAACTGTCTCCACTGGATATTAAGACACCAGCTTACTTCGATAACCATTATTTCATCAATCTGTTAGAAGGGAGAGGGTTGTTGATTTCGGATAACGTTCTG
GTCTCAGAAGATCATGAAGGAGAGATCTTTCAGAAAGTTTGGGAATATGCAGTTAATCAAGATCTTTTCTTCATAGATTTTGTGGAATCTATGTTAAAAATGGGTAATATTAATGTTCTT
ACAGGTATTGAAGGTGAAATTAGGGAGAATTGTAGATTTGTCAATATCTGA

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

AGAGATGAAC AGAAACACAT GACATAACTT TCCAAATGGA GATCAAGCAG AAGAAAGTAT GGCTTTCTTT AATTGTGCTT TATGCAATTA CGACATCAGT TTTGGGGGAC TTTGGAGAAC CATTACTGAA GGGTTTCTAC AAAGAGAGTT GCCCATTGGC AGAGGAAATC GTGAAGCATA ACATCGAAGT TGCTGTTCTC AAAGATCCTC GTATGGCGGC TTCTCTTCTT CGTCTTCAGT TCCACGATTG CTTCGTCTTG GGTTGTGATG CGTCTGTGCT CTTGGACACA CATGGAGATA TGTTGAGTGA GAAACAAGCA ACTCCAAATC TGAACTCTTT ACGTGGATTT GAAGTAATCG ATTACATTAA GTACCTCCTC GAAGAAGCTT GTCCTCTAAC TGTCTCATGT TCCGATATCC TTGCCTTGGC CGCTCGTGAC TCAGTCTTCC TGAGAGGTGG CCCATGGTGG GAAGTTTTGC TAGGGAGAAG AGACTCATTA AAGGCAAGTT TCGCCGGAGC AAACCAATTC ATTCCAGCAC CAAACTCCTC TCTCGACAGC CTCATCATCA ATTTCAAGCA ACAAGGGCTC AACATTCAAG ATCTCATCGC TCTTTCGGGT GCTCATACAA TAGGTAAAGC GAGATGCGTG AGCTTCAAGC AACGCATTGT TCAACCAAAC ATGGAACAAA CGTTCTACGT CGATGAGTTC AGAAGACACA GCACGTTCCG TCGAGTCCTA GGGTCACAAT GCAAAGATTC AAGCCGAGAC AACGAACTGT CTCCACTGGA TATTAAGACA CCAGCTTACT TCGATAACCA TTATTTCATC AATCTGTTAG AAGGGAGAGG GTTGTTGATT TCGGATAACG TTCTGGTCTC AGAAGATCAT GAAGGAGAGA TCTTTCAGAA AGTTTGGGAA TATGCAGTTA ATCAAGATCT TTTCTTCATA GATTTTGTGG AATCTATGTT AAAAATGGGT AATATTAATG TTCTTACAGG TATTGAAGGT GAAATTAGGG AGAATTGTAG ATTTGTCAAT ATCTGAAATC AAACATCAAT CAATACAAAT TGTTTGCACT
T

Retrieve as FASTA