Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
232 |
PWM (Da): |
25763.53 |
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PI (pH):
| 9.86 |
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Sequence 274
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MVINLSPKIPPLVPFICPSATAKVATVTACRTALRLHLPTPWHTSPRPIYLKLKPQVTLHRAFAAMASATTFYDFKPLDKRGNEVPLSDYKGKVVLVVNTASKCGFTPQYAGLEKLYKSVREKHGDNFVILGFPCNQFGNQEPGSNEEIQQFCQVNYGVTFPIMAKVDVNGDNASPLFQWLKAQQPGILGLKRVKWNFEKFLVGKDGTVKGRWASTTKPESLESTILEELAK* |
Retrieve as FASTA
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Remarks |
Complete sequence from genomic (chromo 1, 1 intron). No EST. Incorrect prediction from JGI (5' end is missing). |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGTTATCAACCTGTCTCCGAAAATTCCACCGCTGGTTCCATTTATCTGCCCATCAGCGACAGCAAAAGTAGCTACGGTGACTGCCTGCCGCACGGCTCTGCGCTTGCATTTGCCGACT CCCTGGCACACCAGCCCTAGACCTATCTACTTAAAGTTGAAACCACAAGTGACGCTTCATCGAGCGTTCGCAGCCATGGCCTCCGCAACAACTTTCTACGATTTCAAGCCGCTCGACAGT ACGTGCCTGCACCGCTGACAACCCCGCCACCCCTCGGCCTCCTCGCTGACCCATCTTGCAGAGCGGGGCAACGAAGTACCCCTGTCCGACTACAAAGGCAAGGTCGTCCTGGTAGTCAAC ACGGCCTCCAAGTGCGGCTTCACGCCACAGTATGCCGGGCTCGAGAAGCTCTACAAGTCGGTGCGCGAGAAGCACGGCGATAACTTTGTCATCCTCGGCTTCCCCTGCAACCAGTTCGGC AACCAAGAGCCGGGGTCCAACGAGGAGATCCAGCAATTCTGCCAGGTCAACTACGGCGTGACCTTCCCCATCATGGCCAAGGTCGACGTCAACGGCGACAACGCCAGCCCCCTGTTCCAG TGGCTCAAGGCTCAGCAGCCGGGCATCCTCGGCCTGAAGCGGGTCAAGTGGAACTTTGAGAAGTTCTTGGTGGGCAAAGACGGCACGGTCAAGGGACGGTGGGCGTCAACTACCAAGCCT GAGTCGTTGGAAAGCACCATTCTCGAAGAACTCGCGAAGTGA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGTTATCAACCTGTCTCCGAAAATTCCACCGCTGGTTCCATTTATCTGCCCATCAGCGACAGCAAAAGTAGCTACGGTGACTGCCTGCCGCACGGCTCTGCGCTTGCATTTGCCGACT CCCTGGCACACCAGCCCTAGACCTATCTACTTAAAGTTGAAACCACAAGTGACGCTTCATCGAGCGTTCGCAGCCATGGCCTCCGCAACAACTTTCTACGATTTCAAGCCGCTCGACAAG CGGGGCAACGAAGTACCCCTGTCCGACTACAAAGGCAAGGTCGTCCTGGTAGTCAACACGGCCTCCAAGTGCGGCTTCACGCCACAGTATGCCGGGCTCGAGAAGCTCTACAAGTCGGTG CGCGAGAAGCACGGCGATAACTTTGTCATCCTCGGCTTCCCCTGCAACCAGTTCGGCAACCAAGAGCCGGGGTCCAACGAGGAGATCCAGCAATTCTGCCAGGTCAACTACGGCGTGACC TTCCCCATCATGGCCAAGGTCGACGTCAACGGCGACAACGCCAGCCCCCTGTTCCAGTGGCTCAAGGCTCAGCAGCCGGGCATCCTCGGCCTGAAGCGGGTCAAGTGGAACTTTGAGAAG TTCTTGGTGGGCAAAGACGGCACGGTCAAGGGACGGTGGGCGTCAACTACCAAGCCTGAGTCGTTGGAAAGCACCATTCTCGAAGAACTCGCGAAGTGA |
Retrieve as FASTA
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