RedOxiBase: View Perox 10104

Entry information : WanoGPx02

Entry ID	10104
Creation	2012-01-05 (Passaia GisÃ¨le)
Last sequence changes	2012-01-05 (Passaia GisÃ¨le)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2012-04-27 (Catherine Mathe (Scipio))

Peroxidase information: WanoGPx02

Name

WanoGPx02

Class

Fungi-Bacteria glutathione peroxidase [Orthogroup: Gpx3001]

Taxonomy

Eukaryota Fungi Ascomycota Saccharomycetes Wickerhamomycetaceae Wickerhamomyces

Organism

Wickerhamomyces anomalus (Pichian anomal) [TaxId: 4927 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	WanoGPx02 start..stop	S start..stop
KwicGPx01	274	2e-96	1..159	1..159
KlGPx	273	5e-96	1..161	1..161
SceGPx03	269	3e-94	1..161	1..161
SpastGPx01	269	3e-94	1..161	1..161

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	1111342..1111824	483
complement(join(1111342..1111824))

Literature and cross-references WanoGPx02

DNA ref.	JGI genome: scaffold_5 (1111824..1111342)

Protein sequence: WanoGPx02

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	161
PWM (Da):	18380.51
PI (pH):	8.41

Sequence 0
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MSKFYELAPA DKSGEPFPFK QLEGKVVIIV NVASKCGFTP QYKELEELYK DYKDQGLVIL GFPCNQFGHQ EAGTQEEIQS FCQLNYGVTF PILKKIEVNG VNADPVYNYL KNEKAGLLGF
RGIKWNFEKF IIDKKGQVYE RYSSLTKPSS LKETVEKLLK D*

Retrieve as FASTA

Remarks

Complete sequence from genomic (scaffold_5:1111339-1111824 (-), No intron) No EST.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGTCCAAAT TCTATGAACT AGCACCAGCT GATAAATCAG GTGAACCATT CCCTTTCAAA CAATTGGAAG GCAAAGTTGT CATTATTGTT AATGTTGCAT CAAAATGTGG ATTCACACCA CAATATAAAG AATTGGAAGA ATTATATAAA GATTATAAAG ATCAAGGTTT AGTCATTTTG GGGTTCCCTT GTAATCAATT TGGTCATCAA GAAGCTGGTA CACAAGAAGA GATCCAATCA TTTTGTCAAT TGAATTATGG TGTTACATTC CCAATTTTGA AAAAAATTGA AGTTAATGGT GTTAATGCTG ATCCTGTTTA TAATTATTTG AAGAATGAAA AAGCTGGGTT GTTAGGTTTC AGAGGGATTA AATGGAATTT TGAAAAATTT ATTATTGATA AAAAAGGTCA AGTTTATGAA CGTTATTCAT CTTTAACAAA ACCTTCAAGT TTGAAAGAAA CTGTTGAGAA ATTATTAAAG
GAT

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA