Entry information : TmesGPx01_Fries
Entry ID 10106
Creation 2012-01-06 (Passaia Gisèle)
Last sequence changes 2012-01-06 (Passaia Gisèle)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2013-08-20 (Catherine Mathe (Scipio))
Peroxidase information: TmesGPx01_Fries
Name TmesGPx01_Fries
Class Fungi-Bacteria glutathione peroxidase    [Orthogroup: Gpx3005]
Taxonomy Eukaryota Fungi Basidiomycota Tremellomycetes Tremellaceae Tremella
Organism Tremella mesenterica    [TaxId: 5217 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TmesGPx01_Fries
start..stop
S start..stop
DcryGPx01 259 5.81e-91 1..151 1..151
CgaGPx01 256 1.31e-89 1..151 1..151
CnGPx01_H99 255 2.92e-89 1..151 1..151
CnGPx01_JEC21 254 8.35e-89 1..151 1..151
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '10106' 'join(978373..978396,978682..978763,979081..979256,979493..979642,979707..979736)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 978373..978396 22 N° 2 978682..978763 80 N° 3 979081..979256 174 N° 4 979493..979642 148
N° 5 979707..979736 28  
join(978373..978396,978682..978763,979081..979256,979493..979642,979707..979736)


exon

Literature and cross-references TmesGPx01_Fries
DNA ref. JGI genome:   scaffold_10 (978373..979736)
Protein sequence: TmesGPx01_Fries
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   153 (351)
PWM (Da):   %s   17251.78 (38048.5)  
PI (pH):   %s   4.94 (4.59) Peptide Signal:   %s   cut: 21 range:21-371
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSDIYSFTVQLPKDTIPLFEHKDKTLLFVNVASKCGLTPQYKDLQALYEKYNSKGLEIIGFPCNQFKGQEPGTDQEVLEFCQLNYGVTFPLAVKADVNGPETQPLWAYLKSHAEPPVENI
DWNFSKFLVKDGKVVWFPARSTKVNDVEAALGL*

Retrieve as FASTA  
Remarks Complete sequence from genomic (scaffold_10:978188-979833 (+), 4 introns) No EST.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCAGACATATATTCTTTTACCCCGTAAGTCTTCCTTTTCACCCACTATTATCCTCTCATCTAAGACGAAAAACCCTTCTATTCTCGTGGATCTCCATCACGAATGACACTTCCATAA
TCACCAAAACTCAAGTCATTTATACAATCATCAGACGGACCATCATTCTACCTCCTCTATGACTAAGACCATGACAATTTGTTCGGTCAAAAGCGTCCATCGATTGACCCTGATGAACGG
TGTGATCTACTAAACCGAAGAAATGGGGAAAGACGAATGGAGTGGGGAAGATTAAGTATTGATGAAATCAGGTTCAACTACCTAAAGATACCATCCCTCTATTCGAACATAAAGACAAGA
CGTTGTTATTCGTCAATGTAGCTAGCAAATGTG
TGGTCAGTACTTCCTTTCCTTATTAATCTTCATCCATACAACTCCTTTTCTTCTTACTTTTCACCCATACAACAACTCTCAAAATAA
CCCACTTTCATCACTAAACCATAATCCTCTACCGACGTCTTCCATTCATTGTTCTAATTCTCATCCTTCTCGACCTTCTATCATTCACTCTGCAATCACACATCCAGAATTCCTTTGTTT
CACCTACTTATCCCAAACTTCCTTACTCACCTACCCCAAGTACCATTGACTTCACTATCATTTTCCCCAAGTCGAGTCGAGACAAATTGCCCGAATCACAACTGACGCCAAGGCCTCACA
CCGCAATACAAAGACCTTCAAGCTTTATACGAAAAATACAATTCCAAAGGTCTTGAAATCATCGGATTCCCATGTAATCAATTCAAAGGACAAGAACCAGGTACGGATCAAGAAGTTTTG
GAATTTTGTCAATTGAATTATGGTGTTACTTTTCCTTTGGCCGTCAAG
AGGTGGGTGGATGGTACTGTATATTGTTCATTCCCCCTGTTCCGGGATCGTATAAATTTCCTCGACCTTTCT
TTGGGATCATGATGCGTTCTGCCACTACTTTCTCACGACACATCTACTTGTCTCGGAATCATAATGCGTTCTCCCATCACTTTCCCACCGATATCTAACTATCAAATGAGATCTCGCTGA
ACCCCTTACCATACAAGTGGATAAAGATAAGTTTCACTAACCCAAGGCGGACGTTAATGGACCTGAAACTCAACCACTTTGGGCTTATCTCAAATCTCATGCGGAACCACCCGTCGAAAA
TATCGATTGGAACTTTTCCAAGTTTTTAGTTAAAGATGGTAAAGTTGTGTGGTTCCCCGCTAGGAGCACTAAAGTT
TTGTGAGTTGTCTTTATTCGTCATTTCCAATGATAGAGGATCAG
AAAGCATGTCACTAATGGTCAGAACGACGTTGAAGCTGCTCTAGGTTTGTAG

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCAGACATATATTCTTTTACCGTTCAACTACCTAAAGATACCATCCCTCTATTCGAACATAAAGACAAGACGTTGTTATTCGTCAATGTAGCTAGCAAATGTGGCCTCACACCGCAA
TACAAAGACCTTCAAGCTTTATACGAAAAATACAATTCCAAAGGTCTTGAAATCATCGGATTCCCATGTAATCAATTCAAAGGACAAGAACCAGGTACGGATCAAGAAGTTTTGGAATTT
TGTCAATTGAATTATGGTGTTACTTTTCCTTTGGCCGTCAAG
GCGGACGTTAATGGACCTGAAACTCAACCACTTTGGGCTTATCTCAAATCTCATGCGGAACCACCCGTCGAAAATATC
GATTGGAACTTTTCCAAGTTTTTAGTTAAAGATGGTAAAGTTGTGTGGTTCCCCGCTAGGAGCACTAAAGTT
AACGACGTTGAAGCTGCTCTAGGTTTGTAG

Retrieve as FASTA