Sequence Properties
first value : protein
second value (mature protein)
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Length (aa):  |
687 (666) |
| PWM (Da): |
73910.98 (71925.9) |
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| PI (pH):
| 4.52 (4.49) |
Peptide Signal:
| cut: 22 range:22-687 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MNVRLAAFVA ALAGLSSGAN AGSCPFGYDS VAAMHQQDRQ ISSELYDAQS CDVIDYELVK QDLLHLMTDS QDFWPADFGH YGGLFIRLAW HCNGSYRRAD GRGGCDGGRI RFNPERSWAD
NTNLDKALDL LEPIKLKYGD ALSWGDLIVL SGNVAIESMG GPVLGFCGGR RDDADGTSSL QLGPTPEQES VAPCAVDGQC KEPLGTTTMG LIYVNPEGPM GVPDPALSVH DVRDTFERMG
MNDRETVALI GGGHAFGKTH GACPTGPGPD PTQDPLNPWP GTCGEGAMKG KGNNTFTGGF EGSWTFTPTK WGNGYFKGLT NLEWEKFDGP GGHVQWRPVP DTTPPVRMLT ADIALLHDES
YHNISLEFAA NQTALDEEFS HAWYKLMSRD LGPVARCRGK DVPPAQPFQN PLPPTPASLA DFDAVRSDIR SLLTKSVDGL TSDSSSDGTP YNGALFVHAA WQCASTFRIT DYAGGCNGAR
IRFSPEKDWP VNAGVDKIIS ALEPVKESYP TLSTADLIVL AGQVALEDAG NVTIDFLGGR TDADNGNGTE ILAPREYYNT TLIAVRDNIK ILGVSPYEAV ALAGRPRSVA QQKVLGYSGS
YSNDSLTLSN EYFQVLLNET WTEVSAKEYK AEGKDVYMMD TDLALLAAPE LKEAVQLFAS EEAVFKHVFS SAWAKVMTAD HFNASSY
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Retrieve as FASTA
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| Remarks |
Complete sequence from genomic (no intron). Incorrect prediction from JGI (large 5'end is missing). 100% identical sequence found reverse downstream (duplication or mis-assembly). |
DNA ►
Send to BLAST
|
| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGAACGTCC GCCTCGCCGC CTTCGTCGCC GCGCTCGCCG GCCTGTCCAG CGGCGCCAAC GCCGGCAGCT GCCCGTTCGG CTACGACTCG GTCGCCGCCA TGCACCAGCA GGACCGCCAG
ATCTCCAGCG AGCTGTACGA CGCGCAGAGC TGCGATGTGA TCGACTACGA GCTCGTGAAG CAGGACCTGC TGCACCTGAT GACGGACTCG CAGGACTTCT GGCCCGCCGA CTTCGGCCAC
TACGGCGGCC TCTTCATCCG CCTGGCGTGG CACTGCAACG GCTCGTACCG CCGCGCCGAC GGCCGCGGAG GCTGCGACGG CGGCCGCATC CGCTTCAACC CGGAGCGCAG CTGGGCCGAC
AACACCAACC TGGACAAGGC GCTCGACCTG CTGGAGCCCA TCAAGCTCAA GTACGGCGAC GCGCTGTCGT GGGGTGACCT CATCGTGCTG TCGGGCAACG TGGCCATCGA GAGCATGGGC
GGCCCCGTGC TGGGCTTCTG CGGCGGCCGC CGCGACGACG CCGACGGCAC GAGCAGCCTG CAGCTGGGCC CGACGCCCGA GCAGGAGAGC GTGGCGCCGT GCGCCGTGGA CGGCCAGTGC
AAGGAGCCGC TGGGCACCAC CACGATGGGC CTCATTTACG TGAACCCGGA GGGCCCCATG GGCGTGCCGG ACCCGGCGCT GTCGGTGCAC GACGTGCGGG ACACCTTCGA GCGCATGGGC
ATGAACGACC GCGAGACGGT GGCGCTGATC GGCGGCGGCC ACGCCTTCGG CAAGACGCAC GGTGCTTGCC CGACAGGCCC GGGCCCCGAT CCGACGCAGG ACCCGCTGAA CCCCTGGCCG
GGAACTTGCG GCGAGGGCGC CATGAAGGGA AAGGGCAACA ACACCTTCAC GGGCGGCTTC GAGGGCTCGT GGACGTTCAC GCCCACCAAG TGGGGCAACG GCTACTTCAA GGGCCTCACC
AACTTGGAGT GGGAGAAGTT CGACGGCCCG GGCGGCCACG TGCAGTGGCG CCCCGTGCCC GACACAACGC CGCCCGTGCG CATGCTCACG GCCGACATCG CGCTGCTGCA CGACGAGAGC
TACCACAACA TCTCGCTCGA GTTCGCGGCC AACCAGACCG CGCTGGACGA GGAGTTCTCG CACGCCTGGT ACAAGCTCAT GTCGCGCGAC CTGGGCCCCG TGGCTCGCTG CCGCGGCAAG
GACGTGCCGC CCGCGCAGCC GTTCCAGAAC CCGCTGCCGC CGACGCCCGC CTCGCTGGCG GACTTCGACG CCGTGCGCTC GGACATCCGC TCGCTGCTGA CCAAGTCGGT GGACGGCTTG
ACGAGCGACT CGAGCAGCGA CGGCACGCCG TACAACGGCG CGCTGTTCGT GCACGCGGCG TGGCAGTGCG CGTCGACGTT CCGCATCACC GACTACGCTG GCGGCTGCAA CGGCGCCAGG
ATCCGCTTCT CGCCGGAGAA GGACTGGCCG GTGAACGCCG GTGTGGACAA GATCATCTCG GCGCTGGAGC CCGTGAAGGA GTCGTACCCG ACGCTGTCGA CGGCCGACCT GATCGTGCTG
GCGGGCCAGG TGGCCCTCGA GGACGCCGGC AACGTGACCA TCGACTTCCT GGGTGGCCGC ACGGACGCCG ACAACGGCAA CGGCACGGAG ATCCTGGCCC CGCGCGAGTA CTACAACACG
ACGCTGATCG CCGTGCGCGA CAACATCAAG ATCCTGGGCG TGTCCCCGTA CGAGGCCGTG GCTCTGGCGG GCCGTCCGCG CAGCGTGGCG CAGCAGAAGG TGCTGGGCTA CAGCGGCTCG
TACAGCAACG ACTCACTCAC GCTGTCGAAC GAGTACTTCC AGGTGCTCCT GAACGAGACG TGGACAGAGG TGTCGGCGAA GGAGTACAAG GCGGAGGGCA AGGACGTGTA CATGATGGAC
ACGGATCTGG CTCTGCTGGC GGCGCCCGAG CTGAAGGAGG CGGTGCAGCT GTTCGCGTCC GAGGAGGCCG TCTTCAAGCA CGTGTTCTCT TCGGCGTGGG CCAAGGTCAT GACGGCCGAC
CACTTCAACG CGAGCAGCTA CTAA
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGAACGTCC GCCTCGCCGC CTTCGTCGCC GCGCTCGCCG GCCTGTCCAG CGGCGCCAAC GCCGGCAGCT GCCCGTTCGG CTACGACTCG GTCGCCGCCA TGCACCAGCA GGACCGCCAG
ATCTCCAGCG AGCTGTACGA CGCGCAGAGC TGCGATGTGA TCGACTACGA GCTCGTGAAG CAGGACCTGC TGCACCTGAT GACGGACTCG CAGGACTTCT GGCCCGCCGA CTTCGGCCAC
TACGGCGGCC TCTTCATCCG CCTGGCGTGG CACTGCAACG GCTCGTACCG CCGCGCCGAC GGCCGCGGAG GCTGCGACGG CGGCCGCATC CGCTTCAACC CGGAGCGCAG CTGGGCCGAC
AACACCAACC TGGACAAGGC GCTCGACCTG CTGGAGCCCA TCAAGCTCAA GTACGGCGAC GCGCTGTCGT GGGGTGACCT CATCGTGCTG TCGGGCAACG TGGCCATCGA GAGCATGGGC
GGCCCCGTGC TGGGCTTCTG CGGCGGCCGC CGCGACGACG CCGACGGCAC GAGCAGCCTG CAGCTGGGCC CGACGCCCGA GCAGGAGAGC GTGGCGCCGT GCGCCGTGGA CGGCCAGTGC
AAGGAGCCGC TGGGCACCAC CACGATGGGC CTCATTTACG TGAACCCGGA GGGCCCCATG GGCGTGCCGG ACCCGGCGCT GTCGGTGCAC GACGTGCGGG ACACCTTCGA GCGCATGGGC
ATGAACGACC GCGAGACGGT GGCGCTGATC GGCGGCGGCC ACGCCTTCGG CAAGACGCAC GGTGCTTGCC CGACAGGCCC GGGCCCCGAT CCGACGCAGG ACCCGCTGAA CCCCTGGCCG
GGAACTTGCG GCGAGGGCGC CATGAAGGGA AAGGGCAACA ACACCTTCAC GGGCGGCTTC GAGGGCTCGT GGACGTTCAC GCCCACCAAG TGGGGCAACG GCTACTTCAA GGGCCTCACC
AACTTGGAGT GGGAGAAGTT CGACGGCCCG GGCGGCCACG TGCAGTGGCG CCCCGTGCCC GACACAACGC CGCCCGTGCG CATGCTCACG GCCGACATCG CGCTGCTGCA CGACGAGAGC
TACCACAACA TCTCGCTCGA GTTCGCGGCC AACCAGACCG CGCTGGACGA GGAGTTCTCG CACGCCTGGT ACAAGCTCAT GTCGCGCGAC CTGGGCCCCG TGGCTCGCTG CCGCGGCAAG
GACGTGCCGC CCGCGCAGCC GTTCCAGAAC CCGCTGCCGC CGACGCCCGC CTCGCTGGCG GACTTCGACG CCGTGCGCTC GGACATCCGC TCGCTGCTGA CCAAGTCGGT GGACGGCTTG
ACGAGCGACT CGAGCAGCGA CGGCACGCCG TACAACGGCG CGCTGTTCGT GCACGCGGCG TGGCAGTGCG CGTCGACGTT CCGCATCACC GACTACGCTG GCGGCTGCAA CGGCGCCAGG
ATCCGCTTCT CGCCGGAGAA GGACTGGCCG GTGAACGCCG GTGTGGACAA GATCATCTCG GCGCTGGAGC CCGTGAAGGA GTCGTACCCG ACGCTGTCGA CGGCCGACCT GATCGTGCTG
GCGGGCCAGG TGGCCCTCGA GGACGCCGGC AACGTGACCA TCGACTTCCT GGGTGGCCGC ACGGACGCCG ACAACGGCAA CGGCACGGAG ATCCTGGCCC CGCGCGAGTA CTACAACACG
ACGCTGATCG CCGTGCGCGA CAACATCAAG ATCCTGGGCG TGTCCCCGTA CGAGGCCGTG GCTCTGGCGG GCCGTCCGCG CAGCGTGGCG CAGCAGAAGG TGCTGGGCTA CAGCGGCTCG
TACAGCAACG ACTCACTCAC GCTGTCGAAC GAGTACTTCC AGGTGCTCCT GAACGAGACG TGGACAGAGG TGTCGGCGAA GGAGTACAAG GCGGAGGGCA AGGACGTGTA CATGATGGAC
ACGGATCTGG CTCTGCTGGC GGCGCCCGAG CTGAAGGAGG CGGTGCAGCT GTTCGCGTCC GAGGAGGCCG TCTTCAAGCA CGTGTTCTCT TCGGCGTGGG CCAAGGTCAT GACGGCCGAC
CACTTCAACG CGAGCAGCTA CTAA
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Retrieve as FASTA
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