View Redoxidase 10154

Entry information : EgrPrxII02 (Eucgr.B01112 / Egrandis_v1_0.027538m)

Entry ID	10154
Creation	2012-01-24 (Christophe Dunand)
Last sequence changes	2012-01-24 (Christophe Dunand)
Sequence status	complete
Reviewer	Qiang Li
Last annotation changes	2013-10-30 (Qiang Li)

Peroxidase information: EgrPrxII02 (Eucgr.B01112 / Egrandis_v1_0.027538m)

Name (synonym)

EgrPrxII02 (Eucgr.B01112 / Egrandis_v1_0.027538m)

Class

Atypical 2-Cysteine peroxiredoxin (type II) [Orthogroup: PrxII001]

Taxonomy

Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus

Organism

Eucalyptus grandis [TaxId: 71139 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	EgrPrxII02 start..stop	S start..stop
EcamPrxII02	394	1.43e-142	1..196	1..196
EguPrxII02	390	2.74e-141	1..196	1..196
EglPrxII02	338	1.43e-120	1..196	1..195
CclPrxII05	328	2.49e-116	1..197	24..225

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '10154' 'complement(join(17476011..17476116,17476291..17476385,17477071..17477229,17478611..17478640,17478747..17478947))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	17478747..17478947	199	N° 2	17478611..17478640	28	N° 3	17477071..17477229	157	N° 4	17476291..17476385	93
N° 5	17476011..17476116	104
complement(join(17476011..17476116,17476291..17476385,17477071..17477229,1747861 1..17478640,17478747..17478947))

Literature and cross-references EgrPrxII02 (Eucgr.B01112 / Egrandis_v1_0.027538m)

DNA ref.	Phytozome 12: scaffold_2 (17478947..17476011)

Protein sequence: EgrPrxII02 (Eucgr.B01112 / Egrandis_v1_0.027538m)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	196 (302)
PWM (Da):	20810.72 (32920.8)
PI (pH):	7.41 (7.97)	Peptide Signal:	cut: 27 range:27-328

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MASLLAKRSSSSVLGGLWTGAARTYASVAVGGDIVSAAPGVSLQKARSWDEGVSSKFATTPVKDIFEGKKVVIFGLPGAYTGVCSQQHVPSYKNNIDKFKAKGIDSVICVAVNDPYTMNG
WAENLKAKDAIEFYGDFDASFHKSLDLTKDLSAALLGLRSERWSAYVEDGKVKALNVEEAPSDLKVSGAEVILGQI*

Retrieve as FASTA

Remarks

Complete sequence from genomic (4 introns). Correct prediction from phytozome.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCGTCGCTGCTCGCGAAGCGCTCGAGCTCCTCCGTCCTCGGCGGCCTATGGACGGGCGCGGCCAGGACCTACGCCTCGGTCGCCGTCGGCGGCGACATCGTCTCCGCGGCGCCGGGC
GTCTCCCTCCAGAAGGCTCGGAGCTGGGACGAGGGCGTGTCCTCCAAGTTCGCCACCACCCCTGTCAAGGATATCTTCGAGGTTGGTTTTCGATTTCTTGCTGATTGCTTCATTCGCAGT
GGAAGTTCAGCTTCTGAATTTTTACTAATTTGCTTTGCCTGGGCTTCATTCGGACATGGGATTTCAGGGGGCAAGAAGGTGGTGATTTTCGGACTCCCGGTGAGTGAACTCTCGGCTCTT
TCATGTCTGTAGTTTCGTGGGAAATAATCGAGCCCTTTTTGTCTTCTGGGCAGTTGATTCATGGGTGTCGATTGCAGCAAGCAATGTCTTCCTTATTTAGTGCTAACTTAGCGGCAAAGA
TTGCTCTTTTTTTTCCGACATCTGAAATGGTTGAATAAGACAGAGGAGATGCGTCTGAATTGTCTAATGGGAATCGTTTCAATTATTCGTTTAATGGGTTGCTTTCATGTTCTCGCCTTA
TTGGTTGGTGTCATCGTGTGGAGGCTTGAATAGATCGATAGATTATGATATGCAGCTAGACTTTGCCAATTGCCATGAGAGAGTCGTGTTATGCTCTTTGATAGCAAAAATAGAAATCTT
TCCTTTGAACTCTGCAAAGTTCTTATTTTTGAAAAGCTGGAAGGAGTTTATAGAAATCTGGAAAAGAGCCTAATAAATGAGATCATATTGAAATTTGATGTTTGACGCTTCTATGAAGTA
TTGTCCCATTCTTCGAACATTTATTGTACTTGTGAAAAGGATAGGTGCTGGGTTCCTAGCGGAAACTTCAAAGGCACTGCAGTCCATAATATGAGATTGCATGCTAGTCCACCATGTTTA
GGTTCTGTGGTTCACTTACTTCATGATCCTAGCTGCATCATTGACGAAAATTTGGACATCGAGGTGACTATTTAACCAACTTGTTATAACTTCCAACCAAAATGAAAGTAAAAAAGAAAA
AACGATTTGGATTTAGACAATTTTAAATAAGTTTCACCAGACATTAATGTTATAATTCACGTACTTTTTTATATCGAGGTGTTCAATACTAGATAAAAGTCAATCTAAAACACTAAAAGC
AAAAAATAGAAATAAGAAGTTGAAAAACATGTAACCTTGAACAAAACTTGCACAACAAAGTTAGTATGTTTAGAGAAAACTTTGTTGTTGTCTGTTAATAATGTAGTTTGATGCGATGCC
ATATTTAATCTTCCATCTTACCTCTTAAAGCATTTCTAGTTTTATATACACCATATTTCTATTTTTTTAATTTGTACCCAAGTCCTTGATGCTGAATTCATCTTGCGTCTAATGCCCAAG
AGAGACTGCATATGTCAGTCTATGCAGTCTCTTCTCAATACCATTGCATGTGTTTTCTCGGAATGCATTATCCGGTTATAGTTCATGATGTGCATTATCTTGCCATTTTAACCTCGGAAA
CTGAGACATGTTAACTTTAAGAAGATTTGACATATTGAAGCTGTAGCTACTGCAGGTCAAATGATAAAGGATAGCAAGTTGATATTTAACAATTCTATACTGGTTTTCCTTCTTTCTCTT
GGTGCTTTCTATTCAAGTTTTCATATTTGATGTCTCCCAGGGGGTGCATACACTGGAGTTTGTTCACAGCAGCATGTGCCTAGCTACAAGAATAATATCGATAAGTTTAAGGCTAAAGGC
ATAGACTCTGTGATTTGTGTGGCTGTCAATGACCCCTACACCATGAATGGCTGGGCTGAAAATCTCAAAGCAAAAGATGCTGTAAGTTACTAATTTTGAAACCCAATTCTTTGCTTCTAG
AGATGAACTACTGTGTCTGGCTTACGTATTTTCTTCATCCAAATATCCTTTTGGCAGTCTTTTCTCTCTTAAATGAATTATGAATGGTTTTGGAATGTTTGAGTTGGGTGTTGAGTTCCT
TGACTCATCTTTTTGATAATTTCTTGAGGAAAAATTTGTTGATTGTTGTGAGGATTTCTGGTATTGCCTCACATTTCTTCCTGCAACTTGTAGAACATCAATACGAGGTTATTTTCTTTT
GTTTTTATTTTCTTCAAGAGGATGACTCTCCTTTATGTCACAACGTTCCATTTGCAAAACTGTAAATGCATGTTGTTAGGACATGCAGTGATCACAATCAGAGGTGAAATGGCAGTAGAG
CAGCTAGAATACTTACCTCAGTTTTATTATTAGTGCCATCTTTAAAGAAAGTGTACTACTACAGAAGTTTTCTTGGGCAAAACAATCCATTTCCAGAGATGCAAATGAGGCTTCTTTTTT
TAGAGTATGTGTGTGACACTGTGAAGGAATGTGGTTCATGTATGCACAACAAGCAAAGCTTGATTTTTACCTTGTTTGTGAACTTCTGTCATCTCTGCCTCCCCACATTTTAAAGTGAAA
GAAGGCTCTGACATGAGCTTGTGCTTGTTTTTCTTAATCATAAAAGATATCGAATTCTATGGGGATTTTGATGCTAGCTTCCATAAGAGCTTGGACTTGACTAAAGATCTCTCAGCAGCT
TTGCTTGGACTTCGCTCTGAAAGGTATGCCCTAGGCCCTAATAAGTTAATATTGGACATCAAACACCTCCTTGAATCTCCTTCCGTCATTTTTACCTTTGGACCATCACTTTATGGATGA
AATGCCTAATTAAATGATCAGTTTGTCCTTGGATCTACTCTTTTTTTTTGGGTAATCAAATGGTTGCTCTGGTGTAGATATGGTCAGCTTATGTGGAGGACGGGAAAGTGAAGGCTCTCA
ATGTGGAAGAAGCTCCATCCGACCTCAAGGTTTCTGGTGCCGAGGTTATTCTGGGACAGATATGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA