Sequence Properties
first value : protein second value (mature protein)
|
Length (aa): |
492 |
PWM (Da): |
56679.22 |
|
PI (pH):
| 6.85 |
|
Sequence 683
Send to BLAST
Send to Peroxiscan
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MDPYKYRPSSAHDSSFWTTNSGAPVWNNNASLTVGTRGPVLLEDYHLLEKIANFDRERIPERVVHARGASAKGFFEVTHDISQLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTRGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRIVDFFSHHPESLHMFSFLFDDVGVPQDYRHMEGFGVNTYTLLNESGKAHYVKFHWKPTCGVKSLLEEEAIRVGGSNHSHATKDLYDSIAAGNYPEWQLYIQVIDPDHEDKFDFDPLDVTKIWPEDIVPLQPVGRLVLNKNIDNFFAENEQLAFCPAIVVPGVYYSDDKLLQSRIFSYADTQRHRLGPNYLQLPVNAPKCTHHNNHHEGLMNFMHRDEEVNYFPSRFDSVRHAEKFPIPPPVLNGKRDRCMIEKENNFKQPGERYRSWAPDRQERFIGRWVEALSDPRVTQEIRSIWISYWTADKSLGQKIASCLNVRPSM* |
Retrieve as FASTA
|
|
Remarks |
Complete sequence from genomic (scaffold_6, 8 introns). Incorrect prediction from phytozome (2 extra exon in 5'). |
DNA ►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGACCCGTACAAGGTATCGATTGGCCCTTTTCCCCTTTCCCGCTTCGAATCGTCGGATCTTCCGATCTTCGCGGGCGGTGAAATTCTTTTTGTCCCTTACGTTTTGCGATACTTCTGA TGGGGCTGATCTTCGCTGATCGAGCGGGAATTTTCAAGTTTTTTCGCGTCTGTAAAGCTCGATTCGTTTCCTAGTTTCCGAGAACTTGGAGAAAGAGTACTCCCTGTTGGGATCCATTAG GGAATTGTTCGTGCTAGGGCTCTGTTTCGTCGATCGTCGGATCTTTATCAATCGCACATGACCGTTGCTAAATTGTTGATGTTTCCGCTGCGAATTGTGGATGTCGCAGTATCGTCCGTC GAGCGCTCACGATTCCAGCTTCTGGACGACCAACTCCGGCGCCCCTGTCTGGAACAATAACGCATCCCTGACGGTTGGAACTAGAGGTACGATTACCTCTACGGATCTCAGAGCTGTTTT CTTTACCAAAAGATATGTAATTCTACGCTAGTTGCACTTCAAAGGGGGCGTTTGTTAAACTTTTGCTTTTAATGGTTATGACATGGGAAATTGCTAGGCCAAGCACTTTTTGCATTCTTG CTAAAGTGTCATGGCACAGGAGTGGAGTACGAGATTTTGCGAGAGCTAACATGTCTATGGTCCATGCAAACCTCTTGAGGCCTAGATTGATCAAGCTGACAATGCATAGAAAAATATGAT AGAAAATGCAGTAATTTTTATTTCACAATCCAGAGGCACAGTCGTGGACACTCAGCTACCTGTCCTGCAAATGAACTGGTTCAGTGCAGGCCTCTTTGGCCTATGTATGTGTCCCTCACC CAAAACAGAAAAATGTTAACAGTAATTTAGCTTATCTCGGAGGCATACTTTTTGTTATCCTTAAGCTTTCCGAACATATTTGTCAAGATACAAAGCTTAACAGCATTTAAACGAAATTTT CTTTTATTTACAGGTCCTGTTCTCCTCGAGGATTATCATCTATTGGAGAAAATTGCCAATTTCGATAGAGAGAGAATACCTGAGCGGGTGGTCCATGCCAGGGGAGCGAGCGCAAAAGGA TTTTTCGAGGTCACTCACGATATCTCTCAGTTGACATGTGCTGATTTTCTTCGGGCTCCAGGAGTTCAGACACCTGTAATTGTCCGTTTCTCCACTGTCATCCATGAGCGTGGCAGCCCT GAAACCCTTAGGGACCCTCGAGGTTTTGCAGTAAAGTTTTACACCAGAGAGGTATGAGATGATTGCATGTTTTAGAATCTGCAAATTTATTCTTTTCATCTTCGTTTGTTGACCAGAAGT GTATTTAGTTTACCGATGATCCAGATACAGTGTAGAATTCAGTAGAGTGTTGGTGTCTGTGCTTTAAATCCATGCAGTTCTTAACCATGTGATGATGGATTTTATCTTGACACTTCAACA TGATTAGTTGAAGATGACTTTATCAAAGAGCTGTAATACAAAATTTTATTTCAATTACAAGAGAAGTCAGAACATCAAAATAGAATTAGTGTTTCTTCACGTAATTGTGTGGTTTCTCAT TTTTCTTCTTTTCTTTGACCATTTGTTTTTCTGAATGCAGGGAAACTTTGATCTGGTGGGAAACAATTTCCCTGTCTTTTTTGTTCGCGATGGTATGAAATTTCCAGACATGGTCCATGC TCTTAAACCCAACCCGAAGTCTCACATCCAGGAGAACTGGAGAATAGTTGACTTCTTCTCCCACCATCCTGAGAGTTTGCACATGTTTTCCTTCCTCTTCGATGACGTTGGTGTTCCTCA AGACTACAGACACATGGAAGGATTTGGGGTTAATACTTACACCTTACTTAACGAGTCTGGAAAGGCACATTATGTGAAATTTCACTGGAAACCAACTTGTGGAGTGAAGTCTTTGCTGGA GGAGGAGGCAATACGTGTTGGAGGATCAAATCACAGTCATGCGACTAAGGATCTTTATGACTCGATTGCTGCTGGCAATTACCCAGAGTGGCAACTCTACATCCAAGTTATAGATCCTGA TCATGAAGACAAATTTGACTTTGATCCACTTGATGTGACAAAAATATGGCCTGAGGACATCGTGCCTCTGCAACCAGTAGGCCGCTTGGTGTTGAATAAGAACATCGATAACTTCTTTGC GGAAAATGAACAACTAGCATTTTGCCCTGCAATTGTGGTCCCTGGTGTCTATTACTCTGATGATAAGCTGCTCCAAAGTCGGATTTTCTCCTATGCTGATACTCAGAGACACCGCCTTGG ACCAAATTATCTTCAACTCCCTGTTAATGCTCCTAAGTGCACTCATCACAACAATCACCATGAAGGTTTAATGAATTTCATGCACAGGGATGAAGAGGTAATGATCTTTATTTTCTGTTT GCTTGATAGCGGGCTGGGAACAAATATGCCACAAGCATGACCTAATAACATATTCTTAGCTGGTTGTAATTGAATTGGCTACAGTAGCCTATCGATGCAACTGACCCGGTCGAATCAGTT TGTTTTTATTTTTTTTTAAATGAGGAACTAATGATGTGGTGTATCCATGATGCTGATTTGTAGGTAAATTATTTCCCTTCAAGGTTTGATTCTGTTCGTCATGCAGAAAAGTTTCCCATA CCTCCTCCAGTCTTGAATGGAAAGCGAGATAGGGTAAGTTTCTGGGCCTACCTTGTGCATTTATATCAACATTGACTCTTAAAACATGGGCCCGCCTCTAGGAGAAATAATTAACACTTG CGTTGAAGTTGTACATTACGATAGTTAATCTGTGGCAAGTTGAAAGGCATTGTGGTGCTGCTGTTTTCTGTTTGGACTTTGGATAAAATTGATTTAACTCAAATTCCATTGTGCTGGTGC AATGATCCTGGTGATATCATCCAGCACATTTTCTTCTGCTAGTCTCTCATGTACAAAATTGCCTTTGAGATCGTCCCTACTTGTCCTCAGGGCAATGACAACTCCTTAAAACGACCACTT TATTGAAATGAGGGGGAGTGTAGTAGCTCCGCTGAATTTTTAGACTAAGCTTAAAACTAAGAAAAGAAGGAGCAAGATGTTATAACTAGAAAAGAGATTCTCTGGCTAAAAAAATGAATT TCTTGGGGTTTGCCTTGGATTGGATATTTCTGCTGCTGGTATTCATCTCTATGTGAACTTACTGATCATGCAGTGCATGATTGAGAAGGAGAACAACTTTAAGCAACCGGGAGAGAGATA TCGATCCTGGGCACCGGACAGGTACCTTTCAACCATTGTCTCCCGAGTAGATGTGTAATTTACTGGTCGCTCATGTGTTTCAAATTTGTCGCCAGGCAAGAGCGGTTTATTGGCCGCTGG GTTGAGGCATTATCTGATCCCCGGGTTACCCAGGAGATCCGCTCCATCTGGATCTCTTACTGGACTCAGGTAAGCTATAAGTATTCACCCCTTTTGCTTTATCCAATGCTACCACAATTT GTTTAGTGTTGTTACCTGGAAATTGAGAACGTCTGTCTAGAACATGCTCAAATGATCATATGCTGATGGCCTACGATGCATTTTTGCTACAGGCTGACAAATCGCTTGGTCAGAAGATAG CTTCTTGCCTCAATGTGCGGCCAAGCATGTGA |
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGACCCGTACAAGTATCGTCCGTCGAGCGCTCACGATTCCAGCTTCTGGACGACCAACTCCGGCGCCCCTGTCTGGAACAATAACGCATCCCTGACGGTTGGAACTAGAGGTCCTGTT CTCCTCGAGGATTATCATCTATTGGAGAAAATTGCCAATTTCGATAGAGAGAGAATACCTGAGCGGGTGGTCCATGCCAGGGGAGCGAGCGCAAAAGGATTTTTCGAGGTCACTCACGAT ATCTCTCAGTTGACATGTGCTGATTTTCTTCGGGCTCCAGGAGTTCAGACACCTGTAATTGTCCGTTTCTCCACTGTCATCCATGAGCGTGGCAGCCCTGAAACCCTTAGGGACCCTCGA GGTTTTGCAGTAAAGTTTTACACCAGAGAGGGAAACTTTGATCTGGTGGGAAACAATTTCCCTGTCTTTTTTGTTCGCGATGGTATGAAATTTCCAGACATGGTCCATGCTCTTAAACCC AACCCGAAGTCTCACATCCAGGAGAACTGGAGAATAGTTGACTTCTTCTCCCACCATCCTGAGAGTTTGCACATGTTTTCCTTCCTCTTCGATGACGTTGGTGTTCCTCAAGACTACAGA CACATGGAAGGATTTGGGGTTAATACTTACACCTTACTTAACGAGTCTGGAAAGGCACATTATGTGAAATTTCACTGGAAACCAACTTGTGGAGTGAAGTCTTTGCTGGAGGAGGAGGCA ATACGTGTTGGAGGATCAAATCACAGTCATGCGACTAAGGATCTTTATGACTCGATTGCTGCTGGCAATTACCCAGAGTGGCAACTCTACATCCAAGTTATAGATCCTGATCATGAAGAC AAATTTGACTTTGATCCACTTGATGTGACAAAAATATGGCCTGAGGACATCGTGCCTCTGCAACCAGTAGGCCGCTTGGTGTTGAATAAGAACATCGATAACTTCTTTGCGGAAAATGAA CAACTAGCATTTTGCCCTGCAATTGTGGTCCCTGGTGTCTATTACTCTGATGATAAGCTGCTCCAAAGTCGGATTTTCTCCTATGCTGATACTCAGAGACACCGCCTTGGACCAAATTAT CTTCAACTCCCTGTTAATGCTCCTAAGTGCACTCATCACAACAATCACCATGAAGGTTTAATGAATTTCATGCACAGGGATGAAGAGGTAAATTATTTCCCTTCAAGGTTTGATTCTGTT CGTCATGCAGAAAAGTTTCCCATACCTCCTCCAGTCTTGAATGGAAAGCGAGATAGGTGCATGATTGAGAAGGAGAACAACTTTAAGCAACCGGGAGAGAGATATCGATCCTGGGCACCG GACAGGCAAGAGCGGTTTATTGGCCGCTGGGTTGAGGCATTATCTGATCCCCGGGTTACCCAGGAGATCCGCTCCATCTGGATCTCTTACTGGACTCAGGCTGACAAATCGCTTGGTCAG AAGATAGCTTCTTGCCTCAATGTGCGGCCAAGCATGTGA |
Retrieve as FASTA
|
|