Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
319 |
PWM (Da): |
36730.5 |
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PI (pH):
| 7.67 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
PVFFIRDGKP NPKSHVQENW RILDVLAHHP ESLGMFTLLF DDTGIPQDER NMTGSGVNTY ALINKARKAH YVKFHWKQTC GVKSLLEEEA IRVGGSNHSL ATRDLYDSIA AGNYLEWKLF
VQIMDTDYKD KFDFDPLDVA KTWPKDILxP LMLVGRLVLN KNIDNFFAEN *QLAFCPSIV VPGVYYSDDK LLQVRIFSYS DAQTDRFAPN YLQLPSNAPK CAHHYSHHEG FMNCLISLLQ
INYFPSRYDP VRHAERYPIP TAMLTGKREK GMIEKENNFK QPGERYRSRA PDRQEQFIC* WIDALSEPRM THKIHSIWIS Y
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Retrieve as FASTA
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Remarks |
Pseudogene from genomic. Incorrect prediction from Phytozome (Both 5' end and 3' end are missing, PS is missing, Stops in frames). scaffold_6. No EST. join(44118029..44118726,44119035..44119150,44119326..44119387,44119471..44119555). |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CCCGTCTTCT TTATCCGTGA TGGGAAACCA AACCCCAAAT CCCACGTCCA GGAGAACTGG AGGATCCTAG ACGTTCTCGC CCACCATCCG GAGAGCTTGG GCATGTTCAC CCTCCTCTTT
GATGATACTG GTATTCCACA AGATGAGAGG AACATGACGG GCTCTGGAGT TAACACCTAC GCTTTGATCA ACAAGGCCAG AAAAGCACAT TATGTGAAGT TTCACTGGAA ACAAACTTGC
GGGGTCAAGA GCTTACTGGA GGAAGAGGCG ATTAGAGTCG GGGGATCCAA TCACAGCCTT GCGACTCGGG ATCTTTATGA TTCCATTGCT GCTGGAAACT ATCTTGAATG GAAACTTTTC
GTTCAGATCA TGGATACTGA TTATAAAGAC AAATTTGACT TTGACCCGCT TGATGTGGCT AAGACCTGGC CCAAAGACAT ATTGCnnCCC CTAATGCTAG TTGGCCGCTT GGTCTTGAAT
AAGAACATTG ATAACTTCTT TGCTGAGAAT TAACAGCTTG CATTTTGCCC TTCAATTGTG GTTCCTGGCG TCTACTACTC AGATGATAAG CTGCTCCAAG TTCGTATTTT CTCATATTCT
GATGCTCAGA CGGACCGTTT TGCACCAAAT TATCTTCAAC TCCCTTCTAA TGCTCCTAAA TGCGCTCATC ACTACAGTCA CCACGAAGGT TTCATGAATT GCCATGCATA GGATGAAGAG
GTAAGAATTT TCTTTGAATC CTTCCTTAGC AATACTCTGG CAGCATCTGT TGTGGATTTT TTGTTGATGT AACCAAGTTA GACATCACGC TCTCCTATAA GTATGAAGGC CTAGTGATGC
ATTCTGACAT GTCAATTGTG GATCCCAAAG TGGCGGTGCA AACCCTCCTT TTGTTAGAGG ATTACCTTCT TGATTTTTCT ACTGCCCTTT GTGCCTGAAA CATGCATGTT TACATATGTA
GGAAATACCT TTCTGCTATC ACGTAAAATG ATTATCTGTT GAGCAAATGT TTAATTTCCC TTTTGCAGAT AAACTATTTT CCTTCAAGGT ATGATCCCGT TCGTCATGCG GAGAGATATC
CCATTCCAAC TGCTATGCTG ACTGGAAAGC GTGAAAAAGG TATGTTTTGT AGGATCTCTT TTACTTGGAT AGAGATTGAT TGTCCTGAGG TGCTTTCATG GTGATATCCA TGGGATATAC
TCAACTTGTC CTAGATGATC AATTGAATTG CAGTGAGTGG TATGACTGAT GTATGTGTGT TTGGATCTTG TTATCTTTTG TTTCTCCTGG CAGACCAACA TTGAGAAAGA GAACAACTTC
AAGCAGCCTG GAGAGAGATA CCGATCAAGG GCGCCTGACA GGTATTCTTC AGTTGTGCAT CTCCTGAAAA TGGTTTGATT GTCTCATGTT TCTCAATAAT CTGTCTCTAT CTTTCTTTTC
TCAGGCAAGA GCAGTTCATC TGCTGATGGA TCGATGCTTT GTCTGAACCA CGTATGACTC ATAAGATCCA CAGCATCTGG ATTTCATAT
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CCCGTCTTCT TTATCCGTGA TGGGAAACCA AACCCCAAAT CCCACGTCCA GGAGAACTGG AGGATCCTAG ACGTTCTCGC CCACCATCCG GAGAGCTTGG GCATGTTCAC CCTCCTCTTT
GATGATACTG GTATTCCACA AGATGAGAGG AACATGACGG GCTCTGGAGT TAACACCTAC GCTTTGATCA ACAAGGCCAG AAAAGCACAT TATGTGAAGT TTCACTGGAA ACAAACTTGC
GGGGTCAAGA GCTTACTGGA GGAAGAGGCG ATTAGAGTCG GGGGATCCAA TCACAGCCTT GCGACTCGGG ATCTTTATGA TTCCATTGCT GCTGGAAACT ATCTTGAATG GAAACTTTTC
GTTCAGATCA TGGATACTGA TTATAAAGAC AAATTTGACT TTGACCCGCT TGATGTGGCT AAGACCTGGC CCAAAGACAT ATTGCnnCCC CTAATGCTAG TTGGCCGCTT GGTCTTGAAT
AAGAACATTG ATAACTTCTT TGCTGAGAAT TAACAGCTTG CATTTTGCCC TTCAATTGTG GTTCCTGGCG TCTACTACTC AGATGATAAG CTGCTCCAAG TTCGTATTTT CTCATATTCT
GATGCTCAGA CGGACCGTTT TGCACCAAAT TATCTTCAAC TCCCTTCTAA TGCTCCTAAA TGCGCTCATC ACTACAGTCA CCACGAAGGT TTCATGAATT GTTTAATTTC CCTTTTGCAG
ATAAACTATT TTCCTTCAAG GTATGATCCC GTTCGTCATG CGGAGAGATA TCCCATTCCA ACTGCTATGC TGACTGGAAA GCGTGAAAAA GGTATGATTG AGAAAGAGAA CAACTTCAAG
CAGCCTGGAG AGAGATACCG ATCAAGGGCG CCTGACAGGC AAGAGCAGTT CATCTGCTGA TGGATCGATG CTTTGTCTGA ACCACGTATG ACTCATAAGA TCCACAGCAT CTGGATTTCA
TAT
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Retrieve as FASTA
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