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Entry information : EgrKat[P]08 ( Eucgr.L01419 / Egrandis_v1_0.039072m)
Entry ID 10163
Creation 2012-01-25 (Qiang Li)
Last sequence changes 2013-03-13 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-03-25 (Christophe Dunand)
Peroxidase information: EgrKat[P]08 ( Eucgr.L01419 / Egrandis_v1_0.039072m)
Name (synonym) EgrKat[P]08 ( Eucgr.L01419 / Egrandis_v1_0.039072m)
Class Catalase     [Orthogroup: Kat001]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EgrKat[P]08
start..stop		 S start..stop
EgrKat[P]06 784 0 1..420 1..422
EguKat[P]08 755 0 1..452 1..433
EguKat[P]06 729 0 1..420 1..402
EglKat[P]08-2 722 0 1..452 1..442
Literature and cross-references EgrKat[P]08 ( Eucgr.L01419 / Egrandis_v1_0.039072m)
DNA ref. Phytozome 12:   scaffold_215 (17484..19844)
Protein sequence: EgrKat[P]08 ( Eucgr.L01419 / Egrandis_v1_0.039072m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   448 (910)
PWM (Da):   %s   50718.98 (94725.4) Transmb domain:   %s   i20-42o
PI (pH):   %s   7.99 (4.15) Peptide Signal:   %s   cut: 20 range:20-929
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MASEVTSPLA SRQQSFRVKA YWSFLAFHPC TSFCCWCVAI SMCIGRNYSS VVHARGACAK GFFEVTHDIS HLTRADFLQA PGVQTPVTVR FSILIHERGG PETLRDPRGS RVNFYTRGEG  RFDLVGNNFP IFFICDGMKF PDMVHALRPK PKSRFQENWR ILDFFFHHPE SLRLFTFLFD DIGSAQDYRH MQGSGVNTYT LINKARKAHH VKFH*KPTCG TRNQLAGQEL AGGSGN*SRG  IQSQPCNSGF YDSIAAGNYP EWKLFVQILD PDHEDKFDFG PLDGAKTWPE DILPLMPVGR LVLNRNIDNF FAENEQLAFC PSIVVPGVYY SDLDDKLLPP PLPFPPNTRK CAHHNNHPEG 
FTNFMHRDEE VNYFPSRYDP VCHGERYPIP PAMLTGKHEK TIIEKENNFK QLGERCQS*T PSRLEWFICG *INALSNPRM RSATSGLHTG LR 

Retrieve as FASTA  
Remarks Pseudogene from genomic. Incorrect prediction from Phytozome (Stops in frame, PS and two ends are missing). No EST.
DNA ►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCCAGTG AGGTCACCTC ACCTCTGGCC AGTCGTCAGC AATCATTCCG AGTCAAGGCA TACTGGAGTT TTCTGGCTTT TCATCCTTGT ACATCATTCT GCTGTTGGTG TGTAGCCATT  AGCATGTGCA TAGGAAGAAA TTACTCGGTA AACTACTCTG AGTCAAGGCA TATTGGAGCT AAAAATATGC AGAGAAAACT AACCAAATTC ATCAAGACAC AGTAGAACCT AATTTTAGAG  TAACGCTAAA CGTGGAATAT GCTTATGGCA AACTATCATC TACATCATAG GTTCAATTCT TCTTGACGAT TATCACCTCG TGGAGAAACT TGCCAACTTT GATAGGGAGA GGATTCCATA  GAGTGTTGTC CATGCCAGGG GAGCCTGCGC AAAGGGATTC TTTGAGGTCA CTCATGACAT TTCTCACCTT ACCCGTGCCG ATTTCCTTCA GGCACCGGGA GTTCAAACAC CTGTGACTGT  CCGTTTCTCC ATCCTCATCC ATGAAAGGGG CGGCCCTGAA ACCCTGAGGG ACCCCCGGGG TTCTCGTGTG AACTTCTACA CGAGAGGTGA GGGTCGTTTT GGTAGTAGAC ATGAATGTGC  AGTATGGACG GGCATGAGTA TGATGCTCCC TGTGATGAAT CCTTTCACGG GTGGCCTAAA CTCGACCCAT GCATATGGCA GTTCTCTTGT CCACATTGCA TACATTTGTT TTGTTGCACT  TTGCTATGTG ATCTTACCTT TTCTGTCACT GCAGGGTAAC TTTGATCTGG TAGGAAACAA TTTCCCTATC TTCTTTATCT GCGATGGGAT GAAATTCCCG GATATGGTTC ATGCACTTAG  ACCTAAACCC AAATCCCGCT TCCAGGAGAA CTGGAGGATC CTTGACTTTT TCTTCCACCA TCCCGAGAGC TTGCGCTTGT TCACCTTCCT CTTTGATGAT ATTGGTAGTG CACAAGATTA  CAGGCACATG CAGGGCTCTG GAGTTAACAC CTACACTTTG ATCAACAAGG CCAGAAAAGC GCATCATGTG AAGTTTCACT AGAAACCAAC TTGCGGGTCA AGAGCTTGCT GGAGGAAGTG  GCAATTAGAG TCGGGGGATC CAATCACAGC CATGCAACTC AGGATTTTAT GATTCCATTG CTGCTGGAAA CTATCCTGAA TGGAAACTTT TCGTTCAGAT CCTCGATCCT GATCATGAAG  ACAAATTCGA CTTTGGCCCA CTTGATGGGG CTAAGACCTG GCCCGAGGAC ATATTGCCCC TAATGCCAGT TGGCCGCTTG GTCTTGAATA GGAACATTGA TAACTTCTTT GCTGAGAATG  AACAGCTTGC ATTTTGCCCT TCAATTGTAG TTCCCGGCGT CTACTATTCG GATTTGGACG ATAAGCTGCT GCCCCCCCCn CCCCTTCCTT TCCCCCCCAA TACTCGTAAA TGCGCTCATC  ACAACAATCA CCCTGAAGGT TTCACGAATT TCATGCATAG GGATGAAGAG GTAAGAATCG TCTTAGAATA CTTCAGCAGC GATGCTCTGG GCAGCATCTC TTGTGGATTT TTTGTTGATG  TAACTAGACA TCGTGCTTTC CTATAAGCAT GTAGGCGTTG TGATGCAATC TGACATGTCA ATTGCGGATC CTAAAGTGGC AGTGCGAATG TCCTCCCTCC TTTTGAGGAA GAGTACTTTC  TTAATTTTGC AAATGCACTA TGTACCTCAA ACATACGTAC ATGTTTACAT ATGTAGGAAA TGCCTGTCTG CTATTATGTA AAATGATTAT CTGTTGAGCA AATGCTTAAT TTCCCTGTTG  CAGATAAACT ATTTTCCATC AAGGTATGAT CCCGTTTGTC ATGGAGAGAG GTATCCCATT CCACCTGCTA TGCTTACTGG AAAGCATGAA AAGGTGTGTT TTTAGTTAGG ATCTCTTTTA  CGTAAACTGA GATTGATTGT CTTGAGGTGC TTTCATGGCG ATGTCGATCT CTTTTACGTA AACTGAGATT GATTGTCTTG AGGTGCTTTC ATGGCGATGT CCATGGGATA GACTCAGCTT  GTCCTAGATG ATCAATTGAA TTGCAGTGAG TAGTGCGACT GATGTATGTG TTTGGATTTT GTTTACTTTT GTTGCTCCAA ACAGACCATC ATTGAGAAAG AGAACAACTT CAAGCAGCTC  GGAGAGAGAT GCCAATCATA GACAGGTATT CTTCAGTTGC GCATTTGCTG AAAATAGTTT CATGGTCTCA TGTTTCCCAG TCGTCTGTCT CTGTTTTCGT TTTTCAGGTA AGAGTGGTTC 
ATCTGCGGAT AGATCAATGC TTTATCTAAC CCACGTGTTA CTCnnATGAG ATCCGCAACC TCTGGACTTC ATACTGGTCT CAGG 

Retrieve as FASTA