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Entry information : EgrRboh04 ( Eucgr.H04514 / Egrandis_v1_0.002292m)
Entry ID 10176
Creation 2012-01-25 (Qiang Li)
Last sequence changes 2012-01-25 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-02-19 (Christophe Dunand)
Peroxidase information: EgrRboh04 ( Eucgr.H04514 / Egrandis_v1_0.002292m)
Name (synonym) EgrRboh04 ( Eucgr.H04514 / Egrandis_v1_0.002292m)
Class Respiratory burst oxidase homolog    [Orthogroup: Rboh001]
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EgrRboh04
start..stop		 S start..stop
EglRboh04 1857 0 1..889 1..889
EcamRboh04 1847 0 1..889 1..889
EguRboh04 1801 0 1..889 1..889
AgluRboh03 1507 0 1..889 1..883
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 64437076..64437586 509 N° 2 64437808..64437967 158 N° 3 64438081..64438129 47 N° 4 64438240..64438353 112
N° 5 64438521..64438955 433 N° 6 64439097..64439483 385 N° 7 64439584..64439679 94 N° 8 64439813..64439928 114
N° 9 64440038..64440140 101 N° 10 64440325..64440398 72 N° 11 64440541..64441055 513 N° 12 64441194..64441303 108
join(64437076..64437586,64437808..64437967,64438081..64438129,64438240..64438353 ,64438521..64438955,64439097..64439483,64439584..64439679,64439813..64439928,644 40038..64440140,64440325..64440398,64440541..64441055,64441194..64441303)


exon

Literature and cross-references EgrRboh04 ( Eucgr.H04514 / Egrandis_v1_0.002292m)
DNA ref. Phytozome 12:   scaffold_8 (64437076..64441303)
Protein sequence: EgrRboh04 ( Eucgr.H04514 / Egrandis_v1_0.002292m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   889 (302)
PWM (Da):   %s   100962.62 (32411.3) Transmb domain:   %s   o340-359i480-502o522-544i704-721o
PI (pH):   %s   9.28 (8.40) Peptide Signal:   %s   cut: 25 range:25-326
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MEIQDHHQHAQWSDTESNCSSRLGYSGPLSSTSTKIRSNARFRDD
QDEECYVEITLDVGEDSVSVHNIKGGGDPETALFTSRLGLRPSSLGAQLSFRLRQVSQELRRITSTKGRNNQIDR
TRSGAARALRGLQFMTKNVEIDQGWSEVEARFDELALNGVL
PKSLFGQCIGMNESSEFASELFDALARRRGITSSAVSKPELREFWEQIADQSFDARLQTFFDMVDKNADGRITEEEVKI
IALSASANKLSKIQEQAEEYAALIMEELDPSNLGYIELHNLETLLLQAPIQSRSAHAGSESRVLSQMLSQKLVPTREHNPIKRYYKALAYFIEDNWKRIWVMGLWISICAGLFTWKFIQY
KHRAVFDVMGYCVTTAKGGAETTKFNMALILLPVCRNTVTWLRSRTRLGVIVPFNDNINFHKVIAWGIAVGVGLHAGAHLTCDFPRLLHATDAEYEPMKQFFGEKRPNNYWWFVKGTEGW
TGVSMLVLMTIAYTLAQPWFRRNRLDLPKALKKLTGFNAFWYSHHLFVIVYVLFVIHGYFLYLAKKWYKRTTWMYLAVPVTLYASERLLRALRSGYKTVRIFKVAVYPGNVMALHMSKPQ
GFRYTSGQYIFVNCAAVSPFQWHPFSITSAPGDDYLSLHIRTVGDWTSQLKAVFSACQPPSIDQSGLLRADIATGENVPRIPRLLIDGPYGAPAQDYKNYDVLLLVGLGIGATPLISIVK
DVLNNIKQQKEMEKGIVESGAKSNKRKPFLTRRAYFYWVTREQGSFEWFRGVMNEVAENDRDGVIELHNYCTSVYEEGDARSALIAMLQSLNHAKNGVDIVSGTRVRTHFARPNWRNVFK
HVAVNHPDERGVFYCGVQGVVGEMRRLAQDFSHKTTTKFYFHKENF

Retrieve as FASTA  
Remarks Complete sequence from genomic (scaffold_8, 11 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGATCCAAGATCATCACCAGCATGCTCAGTGGTCTGACACAGAAAGCAATTGTAGCTCCAGACTTGGTTATAGTGGCCCTTTGAGTAGCACGAGCACCAAGATCAGAAGCAATGCA
AGATTCAGGGACGACCAAGATGAGGAATGCTATGTCGAGATCACGCTAGATGTCGGCGAGGATAGCGTCTCGGTTCACAACATCAAGGGAGGAGGAGATCCTGAGACGGCATTGTTCACG
AGTCGCTTGGGGCTGCGGCCCTCATCGCTCGGTGCACAGCTGTCGTTCAGGCTCAGACAAGTCTCACAAGAGCTCAGGCGAATCACCTCGACGAAAGGGCGTAATAATCAGATCGATAGG
ACTAGATCCGGTGCTGCACGGGCATTGCGAGGGCTCCAGTTTATGACCAAGAATGTCGAGATCGATCAAGGTTGGTCTGAGGTCGAAGCAAGGTTCGATGAATTGGCTCTTAATGGAGTT
CTTCCGAAATCACTCTTCGGCCAGTGTATAGAGGTATGTCAACTGATTTTGCTAAAAAGAAATGCTAGAATCGAATACTTAATTTATATAAACAAATGTTGATTGTTTCAAACGGAAAGA
TTTGCATTTATCACATTGTTCCATCTCAAGAATATTCTGTCAACTCATTTAGTCCTTCGATACATTTCTTAGAAATTAGTGAACTTGCATTAAATTAGAGCAGCGGACTGACAAGGATCG
TTGCATCTGTTTAGGGATGAATGAATCCAGTGAGTTTGCCAGCGAGCTATTTGACGCGCTGGCACGACGGAGAGGCATAACATCGTCTGCGGTAAGCAAGCCTGAGCTACGGGAATTCTG
GGAACAGATAGCAGATCAAAGCTTCGATGCGAGGTTGCAAACCTTCTTCGATATATGTAAGTTCACTTGCCCATTTCACTATAATAGCTTTCACTTTGAATCAACTAAAAATCAGGTTTA
CTTGGGACTTATTCAGACAAATCCACTGAGAAGTTATTTAATGATGCAGGGTAGACAAAAATGCAGATGGTCGGATCACCGAGGAAGAGGTGAAAGAGAGGTAAGAGATGGTCAAGAAAA
GAATATGATGATGATGATGATGAGAAATGATTCAATGTGAGAGAATAATTAATAAGTTACTAATTGTGATCATATCATTGTCAACATCAGATAATTGCACTAAGCGCTTCAGCGAATAAG
CTGTCAAAGATCCAAGAACAAGCTGAGGAATATGCAGCCTTGATCATGGAAGAGTTGGATCCTAGTAATCTGGGATACATTGAGAGGTACATGTTCAGATCCAAACCTTCGACTTTTTTA
AATGATTGTTGACCATACGACCCACGTACCGTGCTTACTAATATTCAATTACTTATCTAAGATATTGCCTTGATTTAAAAGTCTAAATTGAGTCAAGTACCTGAGAAGAGCATCTGCTGA
ACTCCTGTTTTAGCTACACAACCTGGAGACACTCCTCTTGCAAGCCCCGATCCAATCAAGGTCGGCCCACGCCGGGTCCGAGAGCCGGGTCCTGAGCCAGATGCTGAGCCAGAAGCTGGT
CCCAACCAGAGAGCACAACCCCATCAAGAGATACTACAAGGCACTGGCCTACTTCATTGAGGACAATTGGAAGAGGATTTGGGTCATGGGCCTATGGATCTCAATCTGTGCAGGCCTGTT
CACTTGGAAGTTCATCCAGTACAAGCACAGAGCTGTGTTTGATGTGATGGGCTACTGTGTGACCACAGCTAAAGGTGGAGCTGAGACTACCAAGTTCAACATGGCCCTGATTTTGCTTCC
AGTTTGCAGAAACACAGTCACTTGGCTGAGGAGTAGAACCAGGTTGGGTGTGATTGTTCCCTTCAATGACAACATCAATTTCCACAAGAGGTATGAACATATTATGCCGCGATAAATTTA
GTTGAAAAGTGTATTTGGATATGCTTTGAAGGAAAAATTGAAAGAGAACATAATTTACTTCATTAAGCACTTAATCTAATTATAAGCGTTAAATGTATGTGGCCTAAATAGGTGATAGCT
TGGGGCATTGCGGTTGGGGTTGGTCTACATGCCGGAGCCCATCTGACCTGCGACTTCCCTAGGCTGCTCCATGCCACCGATGCTGAATACGAGCCAATGAAGCAGTTCTTCGGCGAGAAG
CGCCCCAATAACTACTGGTGGTTCGTGAAAGGGACTGAGGGCTGGACCGGTGTGTCCATGCTGGTGCTGATGACCATAGCATACACCTTAGCCCAGCCCTGGTTCCGCCGCAACCGGCTG
GACCTCCCCAAGGCCCTCAAAAAGCTCACCGGGTTCAATGCTTTTTGGTACTCGCACCACCTCTTTGTGATCGTCTACGTGCTCTTCGTGATACACGGCTACTTCTTGTATTTAGCCAAG
AAGTGGTACAAGAGAACGCGGTGAGTGATAATCTACATCACATTGCTTGGTAATTAATGAGATTTTTACAGTTTGTCCAATATCACATTTCTAACTATGTCTATAAACTCGTTTGCGCAG

ACCTGGATGTATCTTGCAGTACCAGTCACATTATATGCGTCCGAGCGCTTGCTCCGTGCGCTCAGGTCTGGGTACAAGACCGTGCGGATCTTCAAGAGGTGAGGCTCGGATTCGATTAAG
AGTTGTTCTGTTTTGAAACACTGCAGAATAGTTGTCCAGACTGATGTTTTAAAACACGAGGCATTCACAATCACAATAACTGAGTTGGGGTCATATTCTGGTGCGTTTCAGGTTGCAGTT
TATCCAGGAAATGTCATGGCTCTGCACATGTCTAAGCCTCAAGGCTTCAGATACACAAGCGGTCAATACATTTTTGTGAACTGTGCAGCTGTTTCTCCATTCCAATGTGGTAACTTTTAT
TTTTTAACAAAAAAGACAGGAAAATGATTACTTCTGTACATTACTTGTATTAGCCATTGAAAAGGAACTTGGCTAACTGGTCAATCGAACATTATCAGGCATCCATTTTCGATCACCTCA
GCACCCGGCGACGATTACTTAAGCCTTCATATACGCACCGTGGGCGACTGGACATCTCAGCTTAAAGCTGTATTCTCGAAGAGGTGATTGTTCGAGTTTATTTCTAAGTAACTTTGCGAC
ATACTTGGTCCTGCCTATTGGCAACCGATTGCGAGAAATCTTCTGAACTTAAGTAAGGTCCGCATCAGTCTAATTACGACATGCTGTCGTATGGATGTATATGCTCTTTAAAAACATGAC
GAAAAGTCACATTGTGAATGTGTGTAGGCATGTCAGCCTCCATCAATTGATCAAAGTGGACTTCTAAGAGCAGATATCGCAACAGGAGAAAATGTGCCCAGAGGTAATTAGACTTGTTCG
CGCAGCTCATGGTCTGCTCGGCTCGCTAGGCTTGAAGTCTAGATGAGCAGATTCAGGCAACACGAACATAGCGTATACAGTTTTTCGTAGAATGGGCAAGCTAATTGGATATCATTTTCA
ACTAGGATTCCGAGGCTCTTGATCGACGGTCCATACGGTGCTCCAGCACAAGACTACAAGAATTACGACGTGCTTCTCCTAGTCGGGCTTGGCATCGGTGCGACACCATTGATCAGCATC
GTCAAGGACGTCCTCAACAACATCAAGCAGCAGAAAGAGATGGAAAAGGGCATCGTAGAGAGCGGCGCGAAGAGCAACAAGCGAAAGCCGTTCCTGACCCGGCGGGCCTACTTCTACTGG
GTCACCCGTGAGCAGGGCTCGTTCGAGTGGTTCAGAGGCGTGATGAACGAGGTCGCCGAGAACGACAGGGACGGCGTGATCGAGCTCCACAACTACTGCACCAGCGTGTACGAGGAGGGC
GACGCCCGGTCGGCCCTGATCGCGATGCTCCAGTCCCTGAACCACGCCAAGAACGGGGTCGACATCGTGTCGGGCACCCGGGTACGGACGCACTTCGCGAGGCCCAACTGGCGCAACGTC
TTCAAGCATGTCGCGGTCAACCACCCCGACGAAAGAGTTGTGGTGAGCATCCTAAAGCACGTCTAGCACATATTTTCCAGGAAGCATAGACATAATTCACTCCAATAAATGATTAATTAT
CACATTTTCAGCATCTACTCGTGAGTCGACTAATGTCAAGATGTTTCCTTTCTTCTACAGGAGTGTTTTATTGTGGCGTACAAGGGGTGGTTGGGGAGATGAGGAGGTTGGCTCAGGACT
TCTCCCACAAGACCACCACCAAGTTCTATTTCCACAAAGAGAACTTTTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGATCCAAGATCATCACCAGCATGCTCAGTGGTCTGACACAGAAAGCAATTGTAGCTCCAGACTTGGTTATAGTGGCCCTTTGAGTAGCACGAGCACCAAGATCAGAAGCAATGCA
AGATTCAGGGACGACCAAGATGAGGAATGCTATGTCGAGATCACGCTAGATGTCGGCGAGGATAGCGTCTCGGTTCACAACATCAAGGGAGGAGGAGATCCTGAGACGGCATTGTTCACG
AGTCGCTTGGGGCTGCGGCCCTCATCGCTCGGTGCACAGCTGTCGTTCAGGCTCAGACAAGTCTCACAAGAGCTCAGGCGAATCACCTCGACGAAAGGGCGTAATAATCAGATCGATAGG
ACTAGATCCGGTGCTGCACGGGCATTGCGAGGGCTCCAGTTTATGACCAAGAATGTCGAGATCGATCAAGGTTGGTCTGAGGTCGAAGCAAGGTTCGATGAATTGGCTCTTAATGGAGTT
CTTCCGAAATCACTCTTCGGCCAGTGTATAGGGATGAATGAATCCAGTGAGTTTGCCAGCGAGCTATTTGACGCGCTGGCACGACGGAGAGGCATAACATCGTCTGCGGTAAGCAAGCCT
GAGCTACGGGAATTCTGGGAACAGATAGCAGATCAAAGCTTCGATGCGAGGTTGCAAACCTTCTTCGATATGGTAGACAAAAATGCAGATGGTCGGATCACCGAGGAAGAGGTGAAAGAG
ATAATTGCACTAAGCGCTTCAGCGAATAAGCTGTCAAAGATCCAAGAACAAGCTGAGGAATATGCAGCCTTGATCATGGAAGAGTTGGATCCTAGTAATCTGGGATACATTGAGCTACAC
AACCTGGAGACACTCCTCTTGCAAGCCCCGATCCAATCAAGGTCGGCCCACGCCGGGTCCGAGAGCCGGGTCCTGAGCCAGATGCTGAGCCAGAAGCTGGTCCCAACCAGAGAGCACAAC
CCCATCAAGAGATACTACAAGGCACTGGCCTACTTCATTGAGGACAATTGGAAGAGGATTTGGGTCATGGGCCTATGGATCTCAATCTGTGCAGGCCTGTTCACTTGGAAGTTCATCCAG
TACAAGCACAGAGCTGTGTTTGATGTGATGGGCTACTGTGTGACCACAGCTAAAGGTGGAGCTGAGACTACCAAGTTCAACATGGCCCTGATTTTGCTTCCAGTTTGCAGAAACACAGTC
ACTTGGCTGAGGAGTAGAACCAGGTTGGGTGTGATTGTTCCCTTCAATGACAACATCAATTTCCACAAGGTGATAGCTTGGGGCATTGCGGTTGGGGTTGGTCTACATGCCGGAGCCCAT
CTGACCTGCGACTTCCCTAGGCTGCTCCATGCCACCGATGCTGAATACGAGCCAATGAAGCAGTTCTTCGGCGAGAAGCGCCCCAATAACTACTGGTGGTTCGTGAAAGGGACTGAGGGC
TGGACCGGTGTGTCCATGCTGGTGCTGATGACCATAGCATACACCTTAGCCCAGCCCTGGTTCCGCCGCAACCGGCTGGACCTCCCCAAGGCCCTCAAAAAGCTCACCGGGTTCAATGCT
TTTTGGTACTCGCACCACCTCTTTGTGATCGTCTACGTGCTCTTCGTGATACACGGCTACTTCTTGTATTTAGCCAAGAAGTGGTACAAGAGAACGACCTGGATGTATCTTGCAGTACCA
GTCACATTATATGCGTCCGAGCGCTTGCTCCGTGCGCTCAGGTCTGGGTACAAGACCGTGCGGATCTTCAAGGTTGCAGTTTATCCAGGAAATGTCATGGCTCTGCACATGTCTAAGCCT
CAAGGCTTCAGATACACAAGCGGTCAATACATTTTTGTGAACTGTGCAGCTGTTTCTCCATTCCAATGGCATCCATTTTCGATCACCTCAGCACCCGGCGACGATTACTTAAGCCTTCAT
ATACGCACCGTGGGCGACTGGACATCTCAGCTTAAAGCTGTATTCTCGAAGGCATGTCAGCCTCCATCAATTGATCAAAGTGGACTTCTAAGAGCAGATATCGCAACAGGAGAAAATGTG
CCCAGGATTCCGAGGCTCTTGATCGACGGTCCATACGGTGCTCCAGCACAAGACTACAAGAATTACGACGTGCTTCTCCTAGTCGGGCTTGGCATCGGTGCGACACCATTGATCAGCATC
GTCAAGGACGTCCTCAACAACATCAAGCAGCAGAAAGAGATGGAAAAGGGCATCGTAGAGAGCGGCGCGAAGAGCAACAAGCGAAAGCCGTTCCTGACCCGGCGGGCCTACTTCTACTGG
GTCACCCGTGAGCAGGGCTCGTTCGAGTGGTTCAGAGGCGTGATGAACGAGGTCGCCGAGAACGACAGGGACGGCGTGATCGAGCTCCACAACTACTGCACCAGCGTGTACGAGGAGGGC
GACGCCCGGTCGGCCCTGATCGCGATGCTCCAGTCCCTGAACCACGCCAAGAACGGGGTCGACATCGTGTCGGGCACCCGGGTACGGACGCACTTCGCGAGGCCCAACTGGCGCAACGTC
TTCAAGCATGTCGCGGTCAACCACCCCGACGAAAGAGTTGGAGTGTTTTATTGTGGCGTACAAGGGGTGGTTGGGGAGATGAGGAGGTTGGCTCAGGACTTCTCCCACAAGACCACCACC
AAGTTCTATTTCCACAAAGAGAACTTTTAG

Retrieve as FASTA