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Entry information : EgrRboh06 ( Eucgr.J02107 / Egrandis_v1_0.048935m)
Entry ID 10179
Creation 2012-01-25 (Qiang Li)
Last sequence changes 2012-01-25 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-02-16 (Christophe Dunand)
Peroxidase information: EgrRboh06 ( Eucgr.J02107 / Egrandis_v1_0.048935m)
Name (synonym) EgrRboh06 ( Eucgr.J02107 / Egrandis_v1_0.048935m)
Class Respiratory burst oxidase homolog    [Orthogroup: Rboh003]
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EgrRboh06
start..stop		 S start..stop
EglRboh06 1788 0 1..857 1..857
EguRboh06 1776 0 1..857 1..857
EcamRboh06 1761 0 1..857 1..857
AgluRboh06 1321 0 3..857 14..843
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 27020495..27020864 368 N° 2 27020968..27021130 161 N° 3 27021201..27021249 47 N° 4 27021343..27021456 112
N° 5 27021555..27022361 805 N° 6 27022637..27022732 94 N° 7 27022823..27022938 114 N° 8 27023039..27023141 101
N° 9 27023264..27023355 90 N° 10 27023435..27023645 209 N° 11 27023677..27023811 133 N° 12 27023944..27024072 127
N° 13 27024147..27024225 77 N° 14 27024333..27024442 108  
join(27020495..27020864,27020968..27021130,27021201..27021249,27021343..27021456 ,27021555..27022361,27022637..27022732,27022823..27022938,27023039..27023141,270 23264..27023355,27023435..27023645,27023677..27023811,27023944..27024072,2702414 7..27024225,27024333..27024442)


exon

Literature and cross-references EgrRboh06 ( Eucgr.J02107 / Egrandis_v1_0.048935m)
DNA ref. Phytozome 12:   scaffold_10 (27020495..27024442)
Protein sequence: EgrRboh06 ( Eucgr.J02107 / Egrandis_v1_0.048935m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   857
PWM (Da):   %s   98246.56 Transmb domain:   %s   o290-308i423-445o471-493i659-676o
PI (pH):   %s   9.78
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGDSSKWILESIEVDDMADVPLDSSNKSGVHSGGPTSKVNDEAMLARSSSSTRKRVGFQGTRPPALSRMGRTESGARRGLKSLRFLDRTITGKEVDAWKSMEKRFNQFAVDGRISKDKFG
TCIGMGESKEFAGELFETLARRRKIHSENGITQEEMRAFWDDMTNQDIDSRLQIFFDMCDKNGDGKLSEEEVKVIILSASANKLSNLKQQAASYAVLIMEELDPDHLGYIEMWQLETLLR
EMVSSEEANKLAKKTHTLARTMIPRQYRTPISKFLLKTFEFLQENWKRVWVMSLWLTLNLILFVWKFRQYKERDIFQVMGYCVCFAKGAAETLKFNMALILIPVCRRTLTKLRSTALSRI
FPFDDNINFHKSIALAIVIGTSIHIIMHLSCDFPRLISCPKPKFLRYAGPNFNYKQPSYLDLVESVPGVTGIIITILMAFSFTLATHSFRRNVIKLPWPFHHLAGFNAFWYAHHLLFLVY
ALLIVHGYFLFLSRHWYSKSTWMYLSVPLLLYVSERIFTAIDERNHRVNVIKAIIYTGNVLALYISKPPGFKYKSGMYMFVKCPDISNFEWHPFSITSAPGDDYLSVHIRTLGDWTTELK
NRFAVCEPPNEPAGRGSLVRLQTKAISDYDHTQVRFPRILIKGPYGAPAQNYKKYDILFLIGLGIGATPFISILKDLLNQIKPNEQNNVSQKFITSNKFSRCRRDPGQSIPGANKKAPER
AYFYWVTREQGSFEWFKGVMDDIAEYDHNHIIEMHNYLTSVYEEGDARSALIAMVQKLQHAKNGVDVVSESRIRTHFARPNWRKVFSQLASAHPSSRIGVFYCGSPTLTKPLKKLCQEFS
LNSSTRFQFHKENF

Retrieve as FASTA  
Remarks Complete sequence from genomic (scaffold_10, 13 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGGGACTCCTCTAAATGGATTCTGGAAAGCATCGAGGTCGACGACATGGCCGATGTGCCCTTGGACAGCTCCAACAAAAGCGGCGTTCATAGCGGCGGCCCGACTTCCAAGGTGAAC
GATGAGGCAATGCTCGCCCGGAGCTCGAGCAGCACGAGGAAGCGAGTTGGGTTTCAGGGCACTAGGCCACCGGCGTTGTCTAGGATGGGAAGGACCGAATCCGGTGCCAGGAGAGGGCTC
AAGAGCTTGAGGTTCTTGGACAGGACCATCACAGGGAAGGAGGTGGACGCTTGGAAGTCCATGGAGAAACGTTTCAACCAATTCGCAGTCGATGGGAGGATCTCGAAGGACAAGTTCGGG
ACCTGCATTGTGGTAATTCGACGCTGACTTGGAAACCCCAAGACGGGGTCCTGCTTGAAATCTAACTTTTCCTGGGGAAAAAAGAGCTCAGGGGTTGTGAAATGCTGTGTTGCAGGAATG
GGAGAATCCAAGGAATTTGCGGGGGAGCTGTTTGAGACATTGGCGAGGCGTAGGAAGATACACTCGGAGAACGGGATTACTCAGGAGGAAATGAGGGCATTTTGGGACGATATGACTAAC
CAGGACATTGACTCACGCCTTCAAATCTTCTTTGACATATGTAAAGAATTGTGCTTTCTGTGTCTCTTGGTTGTGTTGTTCACAGGAAACTAACTTCGCTAGTGTTTCAGGTGTGACAAA
AATGGCGATGGTAAGCTCTCCGAGGAGGAGGTGAAGGAGAGGTGAGAGATAGCAACTTCCCAAAATCTCCTCTTCTTGTGTTTTTGGACGCTAATGGATAAAATTCTTTTACCTTTTAAT
TCTGGCAAGTGAAGGTAATCATATTGAGCGCTTCAGCAAACAAGCTGTCCAATCTCAAGCAGCAAGCCGCATCCTATGCTGTGTTGATCATGGAAGAGCTCGATCCTGACCATCTCGGGT
ATATCGAAAAGTGAGTAGAAGTCTAGAGCCATTCCTTGAGAAGAGCATGTTTGTGTGTTCATCTATCGAGTCCTCTCTCTCTCTTCCTAATTTTGCAAGCTTAAGCAGATGTGGCAACTC
GAGACTCTACTGAGGGAGATGGTGAGCTCCGAAGAAGCCAACAAGCTGGCCAAAAAAACCCACACTCTTGCAAGGACCATGATTCCGAGACAATATAGGACTCCGATCAGCAAATTTTTA
TTGAAAACCTTCGAATTTCTCCAGGAGAATTGGAAGAGAGTGTGGGTCATGTCACTTTGGTTGACTCTAAATTTGATCCTTTTTGTCTGGAAGTTCCGTCAATACAAGGAGAGAGACATA
TTTCAAGTCATGGGTTACTGTGTTTGTTTTGCGAAGGGCGCTGCTGAGACGCTCAAATTCAACATGGCCCTTATTCTCATCCCTGTGTGTAGGAGGACGCTTACTAAACTTAGATCAACT
GCCCTAAGTAGGATATTTCCTTTCGACGACAATATTAATTTCCACAAGTCGATAGCACTGGCAATAGTAATCGGGACTTCAATACATATTATTATGCACCTTTCGTGTGATTTCCCAAGA
CTAATTTCATGTCCTAAGCCAAAGTTTTTGAGGTACGCGGGGCCTAACTTCAATTACAAGCAGCCAAGTTACTTGGATCTAGTTGAGAGCGTTCCTGGTGTTACCGGGATTATAATTACC
ATCTTGATGGCTTTCTCTTTCACACTGGCCACGCATTCATTTAGAAGGAATGTCATCAAGTTACCTTGGCCATTCCACCATCTAGCCGGGTTCAATGCCTTCTGGTACGCTCACCATTTG
CTGTTCCTGGTCTATGCTCTCTTGATAGTGCACGGCTACTTCCTGTTTCTGAGTAGGCACTGGTACTCAAAAAGTGTGTAAGTATGATTTATGCACTTGAACTAAATCATTTTATTTGTT
CATAGATTTGTCAGATGATTTTACTGCGACGACAGAACTGTTTCTGCTTAACAATGTGTTTGTATTCAATGCTATGCTTAACATGTCATCTTTGGTTCATTGCATATTCGAATTTCATTG
AACGTGTTCTTGAGCTTAAAATGCCTTATAACTTTGTCAAGTGATATTGCTGTCTTAGTTTCATGCTGATGAAAGAAAGCTATTATGAACTGTTAAATTTCTTCCTGTGCAGACATGGAT
GTATCTCTCTGTTCCTTTATTACTTTATGTCAGCGAGAGAATTTTCACAGCTATTGACGAGCGCAACCATCGTGTCAATGTTATCAAGAGGTCAGCAATCATAGAGCTCTCCTGCCTTCA
ATTCTCAAGTCCCAGGAACATGTATAAGTGCTTATGAACTGAATACATGAGTTATTGCAGGCAATCATATACACAGGAAATGTTTTGGCGTTGTACATAAGCAAACCCCCAGGATTCAAG
TATAAAAGCGGAATGTATATGTTTGTCAAGTGTCCAGATATTTCCAACTTCGAGTGTGGTAATGCATTGCTTTACTCAACAACAGGCTAAACCAAGTCTGTTAGTTGCTAGCTGCACATT
TTTATGAATTGAGCTGATTGATTTGTCACTTGTCATAGGCATCCTTTTTCTATCACTTCCGCACCAGGAGATGACTACTTGAGTGTCCACATACGAACCTTGGGAGACTGGACCACGGAG
CTTAAGAACAGATTTGCACAGAGGTTAACAGATTATGGTGCTATGGCTAGAAGTTTATCTACTATAACGCACTACTGCTTGCTTCTTGATCTTAAATGTCTCACTTTCTGTTTCCACTTT
TAAGTGCTAAGTCGAAGAATTGCAGGTTTGTGAGCCACCGAACGAGCCAGCGGGAAGGGGAAGTCTAGTGAGGCTTCAAACCAAGGCAATCTCAGATTATGATCACACACAAGTCAGAGG
TGGAGCAAAGTTTTGGTGATCTCGTTTTGTGGCTTCAATGATGTTGTTAAATCTCATAATTTCTCCTCAATTTTATAGATTCCCGAGAATCCTCATTAAGGGACCGTATGGAGCCCCAGC
TCAGAACTACAAAAAGTACGACATCCTTTTCCTTATCGGTCTAGGGATCGGGGCAACACCATTTATCAGCATTTTGAAGGACCTCCTCAACCAGATCAAGCCGAACGAACAAAACAATGT
GAGCCAAAAGTTTATAACTTCAAACAAGTTTAGCAGATGTAGGAGACAAAAGTAGTAAACAGGATGATTTGACCACTTGCAGGATCCTGGACAAAGCATACCAGGTGCAAATAAGAAGGC
ACCGGAAAGAGCATACTTTTATTGGGTAACAAGGGAACAGGGTTCGTTTGAATGGTTCAAAGGTGTGATGGATGATATCGCAGAATACGACCATAATATGTAAGTTCCAAAACAATGGAA
AACATGCTTCATGACCACCTCGCCTTCTTACGTTTACACTCATTCTTGTAGTAGCACATCCTCTTCTGTTTATATCATTCTCACTGTTTATTGGTCTAATGAGCTGAGCAGCATATAATA
GAGATGCACAACTACTTGACTAGTGTATATGAAGAAGGAGATGCACGGTCAGCACTCATCGCAATGGTGCAGAAGCTGCAGCATGCAAAGAATGGAGTGGATGTTGTCTCAGAAAGCCGG
GGGTATATGCCTCTAGTTATTATTCCTCTGATCATTTAATTCATGTCTGGCTCATTTCTGACATACGTGCGCACAGATAAGAACGCATTTTGCGAGGCCTAACTGGAGAAAGGTGTTCTC
CCAACTGGCAAGTGCTCATCCTTCTTCTCGAATAGAGGTACTGGTTTTGATTTGCGGCCATGGAGAAATGTCAAAATGCACTTAACTGATGAGATTGTTCTCATTCTGGCTCTTGCCTCT
AATGTGGATGTTGGGCCCTTGCAGGTGTTTTCTACTGTGGAAGTCCAACGCTTACTAAGCCGTTAAAGAAGCTTTGTCAAGAATTCAGCCTAAACTCATCGACCCGTTTCCAATTTCACA
AGGAAAACTTCTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGGGACTCCTCTAAATGGATTCTGGAAAGCATCGAGGTCGACGACATGGCCGATGTGCCCTTGGACAGCTCCAACAAAAGCGGCGTTCATAGCGGCGGCCCGACTTCCAAGGTGAAC
GATGAGGCAATGCTCGCCCGGAGCTCGAGCAGCACGAGGAAGCGAGTTGGGTTTCAGGGCACTAGGCCACCGGCGTTGTCTAGGATGGGAAGGACCGAATCCGGTGCCAGGAGAGGGCTC
AAGAGCTTGAGGTTCTTGGACAGGACCATCACAGGGAAGGAGGTGGACGCTTGGAAGTCCATGGAGAAACGTTTCAACCAATTCGCAGTCGATGGGAGGATCTCGAAGGACAAGTTCGGG
ACCTGCATTGGAATGGGAGAATCCAAGGAATTTGCGGGGGAGCTGTTTGAGACATTGGCGAGGCGTAGGAAGATACACTCGGAGAACGGGATTACTCAGGAGGAAATGAGGGCATTTTGG
GACGATATGACTAACCAGGACATTGACTCACGCCTTCAAATCTTCTTTGACATGTGTGACAAAAATGGCGATGGTAAGCTCTCCGAGGAGGAGGTGAAGGAGGTAATCATATTGAGCGCT
TCAGCAAACAAGCTGTCCAATCTCAAGCAGCAAGCCGCATCCTATGCTGTGTTGATCATGGAAGAGCTCGATCCTGACCATCTCGGGTATATCGAAATGTGGCAACTCGAGACTCTACTG
AGGGAGATGGTGAGCTCCGAAGAAGCCAACAAGCTGGCCAAAAAAACCCACACTCTTGCAAGGACCATGATTCCGAGACAATATAGGACTCCGATCAGCAAATTTTTATTGAAAACCTTC
GAATTTCTCCAGGAGAATTGGAAGAGAGTGTGGGTCATGTCACTTTGGTTGACTCTAAATTTGATCCTTTTTGTCTGGAAGTTCCGTCAATACAAGGAGAGAGACATATTTCAAGTCATG
GGTTACTGTGTTTGTTTTGCGAAGGGCGCTGCTGAGACGCTCAAATTCAACATGGCCCTTATTCTCATCCCTGTGTGTAGGAGGACGCTTACTAAACTTAGATCAACTGCCCTAAGTAGG
ATATTTCCTTTCGACGACAATATTAATTTCCACAAGTCGATAGCACTGGCAATAGTAATCGGGACTTCAATACATATTATTATGCACCTTTCGTGTGATTTCCCAAGACTAATTTCATGT
CCTAAGCCAAAGTTTTTGAGGTACGCGGGGCCTAACTTCAATTACAAGCAGCCAAGTTACTTGGATCTAGTTGAGAGCGTTCCTGGTGTTACCGGGATTATAATTACCATCTTGATGGCT
TTCTCTTTCACACTGGCCACGCATTCATTTAGAAGGAATGTCATCAAGTTACCTTGGCCATTCCACCATCTAGCCGGGTTCAATGCCTTCTGGTACGCTCACCATTTGCTGTTCCTGGTC
TATGCTCTCTTGATAGTGCACGGCTACTTCCTGTTTCTGAGTAGGCACTGGTACTCAAAAAGTACATGGATGTATCTCTCTGTTCCTTTATTACTTTATGTCAGCGAGAGAATTTTCACA
GCTATTGACGAGCGCAACCATCGTGTCAATGTTATCAAGGCAATCATATACACAGGAAATGTTTTGGCGTTGTACATAAGCAAACCCCCAGGATTCAAGTATAAAAGCGGAATGTATATG
TTTGTCAAGTGTCCAGATATTTCCAACTTCGAGTGGCATCCTTTTTCTATCACTTCCGCACCAGGAGATGACTACTTGAGTGTCCACATACGAACCTTGGGAGACTGGACCACGGAGCTT
AAGAACAGATTTGCACAGGTTTGTGAGCCACCGAACGAGCCAGCGGGAAGGGGAAGTCTAGTGAGGCTTCAAACCAAGGCAATCTCAGATTATGATCACACACAAGTCAGATTCCCGAGA
ATCCTCATTAAGGGACCGTATGGAGCCCCAGCTCAGAACTACAAAAAGTACGACATCCTTTTCCTTATCGGTCTAGGGATCGGGGCAACACCATTTATCAGCATTTTGAAGGACCTCCTC
AACCAGATCAAGCCGAACGAACAAAACAATGTGAGCCAAAAGTTTATAACTTCAAACAAGTTTAGCAGATGTAGGAGACAAGATCCTGGACAAAGCATACCAGGTGCAAATAAGAAGGCA
CCGGAAAGAGCATACTTTTATTGGGTAACAAGGGAACAGGGTTCGTTTGAATGGTTCAAAGGTGTGATGGATGATATCGCAGAATACGACCATAATCATATAATAGAGATGCACAACTAC
TTGACTAGTGTATATGAAGAAGGAGATGCACGGTCAGCACTCATCGCAATGGTGCAGAAGCTGCAGCATGCAAAGAATGGAGTGGATGTTGTCTCAGAAAGCCGGATAAGAACGCATTTT
GCGAGGCCTAACTGGAGAAAGGTGTTCTCCCAACTGGCAAGTGCTCATCCTTCTTCTCGAATAGGTGTTTTCTACTGTGGAAGTCCAACGCTTACTAAGCCGTTAAAGAAGCTTTGTCAA
GAATTCAGCCTAAACTCATCGACCCGTTTCCAATTTCACAAGGAAAACTTCTAG

Retrieve as FASTA