View Redoxidase 10180

Entry information : EgrRboh03 ( Eucgr.F02491 / Egrandis_v1_0.045742m)

Entry ID	10180
Creation	2012-01-25 (Qiang Li)
Last sequence changes	2012-01-25 (Qiang Li)
Sequence status	complete
Reviewer	Christophe Dunand
Last annotation changes	2016-02-16 (Christophe Dunand)

Peroxidase information: EgrRboh03 ( Eucgr.F02491 / Egrandis_v1_0.045742m)

Name (synonym)

EgrRboh03 ( Eucgr.F02491 / Egrandis_v1_0.045742m)

Class

Respiratory burst oxidase homolog [Orthogroup: Rboh003]

Taxonomy

Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus

Organism

Eucalyptus grandis [TaxId: 71139 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	EgrRboh03 start..stop	S start..stop
EglRboh03	1651	0	13..798	29..814
EguRboh03	1643	0	1..798	1..798
JregRboh08	1163	0	13..798	16..803
EgrRboh06	1147	0	13..798	51..857

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '10180' 'join(34547463..34547497,34548047..34548255,34548369..34548531,34548633..34548681,34548763..34548876,34548958..34549764,34549891..34549986,34550089..34550204,34550296..34550398,34550537..34550628,34550712..34550871,34550957..34551091,34551192..34551320,34551416..34551494,34551648..34551757)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	34547463..34547497	33	N° 2	34548047..34548255	207	N° 3	34548369..34548531	161	N° 4	34548633..34548681	47
N° 5	34548763..34548876	112	N° 6	34548958..34549764	805	N° 7	34549891..34549986	94	N° 8	34550089..34550204	114
N° 9	34550296..34550398	101	N° 10	34550537..34550628	90	N° 11	34550712..34550871	158	N° 12	34550957..34551091	133
N° 13	34551192..34551320	127	N° 14	34551416..34551494	77	N° 15	34551648..34551757	108
join(34547463..34547497,34548047..34548255,34548369..34548531,34548633..34548681 ,34548763..34548876,34548958..34549764,34549891..34549986,34550089..34550204,345 50296..34550398,34550537..34550628,34550712..34550871,34550957..34551091,3455119 2..34551320,34551416..34551494,34551648..34551757)

Literature and cross-references EgrRboh03 ( Eucgr.F02491 / Egrandis_v1_0.045742m)

DNA ref.	Phytozome 12: scaffold_6 (34547463..34551757)

Protein sequence: EgrRboh03 ( Eucgr.F02491 / Egrandis_v1_0.045742m)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	798
PWM (Da):	91670.82	Transmb domain:	i245-264o331-353i381-403o429-451i617-634o
PI (pH):	9.95

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MNMLLHKTQVIGTTRKRNVSYGGIPRMERTASSASRGLMSLRFLDRTITGKEGDAWRSIEKRFHQHATNGQLSRDKFGVCGMGDSKEFAGELFDALSRRRKVNAENGISIDQLRQFWEDM
TTRELESRLQIFFDMCDKNGDGRLTEDEVKVIVLSAASNRLSNLQQQAASHASLIMERLDPDHQGYIEMWQLKTLLREMVNPDQRSKSSVNSQNLTRTMLPKGYRNPMSRLVHKNIERIH
DNWRRIWVVGLWLVANMILFLWKFNKTRHGPAFDITGYCLCYAKGSAETLNLNMALVLLPVCRRTLTKLRSSFLGTFIPFDDNINFHKIIALAIAIGSVVHIAMHFMCNFPRITSCPKSQ
FKQVFGPYFHNRQPHYIDLVNNLSSTTGVLMFMMMAFSFTLATHWFRRNIIKLPWGLHHLAGFNAFWYAHHLLAVAYVFFILHGYFLVISRPWYTKTAWMYVMVPILLYTSERAFTSASE
LQHRVDIVKAIVYSGNVLALYMSKPPGFNYNSGMYLFVKCPDISKFEWHPFSITSAPGDAFLSVHMRALGDWTTELRNRFAVCEPPSKKPGKGGLTKMATRTSHNLEELQEKFPKIFIKG
PYGAPAQDYEKYDILLLIGLGIGATPFISIIKDILNHVKLNKLQDSDQDQSSGARKGPKRAYFYWVTREQNSFEWFKGVMDDIAERDDHNVIEMHNYLTSLYEEGDARSALIAMVQKLQH
AKNGVDIFSESQIKTHFARPNWRKVFSEIAMRHKSSRIGVFYCGSSVLTKTLRKLCQELSLESSTRFQFHKENF

Retrieve as FASTA

Remarks

Complete sequence from genomic (scaffold_6, 14 introns).

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGAATATGCTTCTGCACAAAACGCAGGTTATTGGGGGTAAGTTAAATTTTTTTTTTTTAGTACAAGGTATCGTAAGTTGTCCCATGGAAATTGCCGTTTTTGTAGTATTTTTACATTGG
AAAAACATAATTTTTGTTTTCGGTTGATCTTATGAGATGTTTAAGAATCGGTTGGCTTTCCAGTTACGTGGTGCAACGGCATTACTTTCAGGGGTGGTCAAAAAACAATTCCAGGTACAA
AAAAGTGTTCCTCCATTGTAATGGTGTGCGTTGGTTACAATTGTTCTTGTTTCATTTCCTATCTTTAGGCTTTCCTCTTCCTCTTCCGCCTCTTAAAACTCACCATCTTTACTTCTCTTT
TCATCTTTCATCCTCATACTTTTCCCAGTTACCCGAACCCTCGGAGGGAATACACCCAAAACCACAAATTGTTCATAGTTGCAATGAGGGTTCATCATGACCGTAACGGGAGTTCCGCTA
GATGCTCTCTTGAAAGCATTGAGATGGACAATGCGGTGGAAACCAGTGAGAGCTCCGCCCCGCCGCATCCTAATGACATACCATTGCCATCGAGGCGGAACTCAAGCACGACGCGGAAGA
GGAATGTATCGTACGGCGGCATCCCTAGGATGGAAAGAACGGCATCCAGTGCCTCTCGAGGCCTCATGAGCTTGAGGTTTCTGGATAGGACAATTACCGGGAAGGAAGGAGATGCCTGGA
GATCAATCGAGAAGCGTTTCCATCAACACGCGACGAACGGCCAACTCTCGAGAGACAAATTTGGAGTCTGCATTGTGGTTGATCCTTAGAAAGTCTTGCTGCTATCTGAATCATGATTTT
CCAGATAATAATAATAATAATAATTGCACAATTTGATTGAGAAGTGACATTGTTTTATTCTGCGTGGAAGGAATGGGAGATTCCAAGGAATTTGCAGGAGAGTTATTCGACGCCTTATCA
AGACGGAGGAAAGTGAATGCCGAGAATGGAATATCAATAGACCAATTGAGACAATTTTGGGAAGACATGACGACTCGAGAACTCGAATCCCGACTGCAGATATTCTTTGATATATGTAAA
GCAACTCTCGTCCATCTCCTATTATCGTTCGCAACCTAAAGCGTACATTGCGTTGCTGGTAATACATGTGATGAAGTTTCGCGACGAATGCTGCAGGTGTGACAAGAATGGTGATGGGAG
GCTAACTGAGGATGAGGTAAAAGAGAGGTGAGGCAAAAGGAGACTTACTAATCACTCGTTTAGCGTGTCCTTTGGGCTCTTTTATGATGGACTGGAAATTTTTCAAAGGTGATAGTGTTG
AGCGCCGCCTCGAATAGGCTGTCAAATCTCCAGCAGCAAGCGGCATCTCACGCATCTCTGATCATGGAAAGACTTGATCCCGACCATCAAGGATACATCGAGAGGTACCGAGTCAGATAG
TCCATCATGTCCTGTTCGAGTTCGTGTTCCTCCCATGTTGTTGTTCATCGCTTCTTTGTTTTCAGATGTGGCAATTAAAGACTCTCCTGAGAGAAATGGTGAACCCTGATCAAAGGAGCA
AGTCGTCAGTGAATTCTCAAAACCTGACCAGAACCATGCTTCCCAAAGGATACAGAAACCCAATGAGTCGGCTCGTGCACAAGAACATCGAAAGGATCCATGACAATTGGAGGCGAATAT
GGGTCGTCGGGCTGTGGCTGGTCGCAAACATGATCCTCTTCCTTTGGAAGTTTAACAAAACGAGGCACGGCCCCGCCTTTGACATCACGGGCTATTGTCTTTGCTACGCCAAGGGCTCTG
CCGAGACACTCAATCTCAACATGGCTCTCGTCCTCCTCCCCGTATGCAGAAGAACTCTCACGAAGCTACGCTCGTCCTTCCTTGGTACCTTCATACCATTCGACGACAACATAAACTTCC
ACAAGATAATCGCGCTGGCCATAGCTATAGGATCTGTCGTTCACATTGCAATGCATTTTATGTGCAACTTCCCCAGGATAACTTCCTGCCCAAAATCACAATTCAAGCAAGTGTTTGGCC
CGTACTTCCATAATAGGCAACCTCATTACATCGACTTGGTCAATAACTTGTCCAGCACCACCGGGGTTCTCATGTTCATGATGATGGCCTTCTCTTTCACACTGGCGACTCATTGGTTCA
GGAGAAACATCATCAAGCTACCGTGGGGGCTCCATCATTTAGCAGGATTTAATGCCTTCTGGTACGCACATCATTTGCTAGCCGTTGCCTATGTCTTCTTCATACTTCACGGCTACTTCC
TCGTGATCAGTCGACCTTGGTACACGAAAACGCGGTAAGTACACAATGGTCTAATTCCTTATTCTGTTCACCATTAATTCATAAGGCCTGAATTCTCCGGTCGTACCATCATTCCTCTGA
AAACACGGCAAGAATCATTATACGGTTGGACTTTATGCAGGCATGGATGTATGTGATGGTCCCAATCCTACTCTACACAAGCGAGAGAGCATTCACATCTGCTTCTGAACTCCAACATCG
AGTTGATATCGTTAAGAGGTATCACTCACTTTACCGAACTGCCGTGTTCCACATTCCTTTTTGGTTTACACGAATCTTAGTGCTACGATAAATTCATGCTCGGCTCAAAAAACTTTTCAG

GCCATTGTTTATTCTGGAAACGTCCTTGCATTGTACATGAGCAAGCCTCCAGGTTTCAACTACAACAGCGGAATGTACCTTTTCGTCAAATGCCCTGATATATCAAAGTTCGAATGTGGT
GTATAGAACATAATCGCTGAAACCTATTTACTCGTCATACCCCTATGGCTTTTATTGCTGAAACTCATCGGTGTTTTTGCTCGGGACAGGCATCCTTTCTCCATTACTTCCGCACCGGGA
GATGCCTTCTTGAGTGTTCACATGCGAGCCTTGGGCGATTGGACTACAGAGCTCAGGAATAGATTCGCCGAGAGGTATATTCTATTGATTTTCTCATTCGTTTTTAGATTGCACAACCCA
TGGACTCTAGTCGAAAGATATAAAAAAATCACCACATTTTCCATGTTGAGTATCGAACTCAATGTTCATCTTCTTCAATGAGAAATTGTTAGGTTTGTGAGCCACCAAGTAAAAAACCAG
GGAAGGGAGGTCTAACGAAGATGGCCACGAGAACATCCCACAACTTGGAAGAGTTACAAGAGAAAAGTGAGTGAAAATTATGGCTAAATTCTGTCCCACCCCTTCCATGCAAATGCTTTC
GCTCTAACAGATATTCATTGTTGTCCAAGGTTTCCAAAGATTTTCATCAAGGGGCCATACGGTGCTCCGGCTCAGGACTACGAGAAGTATGACATCCTCCTACTCATCGGTCTTGGCATC
GGAGCGACTCCTTTCATCAGCATCATAAAAGATATCCTGAATCACGTCAAGTTGAATAAGCTCCAAGCACAGTAAGTAGAAAAGGGAAAAACACTCGCACAAGCAATTTCAAATTCAGTT
AGCACGACCATTTGCCAAAACTATTGATGCATGCAGGATTCGGATCAAGATCAATCATCAGGGGCAAGAAAAGGTCCTAAAAGAGCATACTTTTACTGGGTTACGAGGGAACAAAACTCT
TTCGAGTGGTTCAAGGGCGTCATGGATGATATTGCAGAAAGAGACGATCATATGTCGGTTCGCCATTTCCAAAACTACCAAGTGTGATGAATCCTCCAATTAATTATAGTTTTTCAACTA
AAATGTCGCTTTGGGTACTGGTGATTGTTGTAGAATGTAATAGAGATGCACAACTACCTGACCTCTCTATATGAGGAAGGAGATGCGAGATCAGCACTCATTGCCATGGTCCAAAAGTTG
CAGCACGCGAAGAATGGTGTCGACATCTTCTCGGAAAGTCAGAGGTAACTCTTGATCAGTCACACAAAAGAAAAACAAAGAAACATTCACAGCACAATGCACCTATTTAGGCTGTCCTTT
AACGTTGCTTGTTCGACAGATAAAAACTCACTTTGCGAGGCCTAATTGGAGAAAGGTGTTCTCTGAAATTGCAATGCGGCACAAGTCGTCTCGTATAGAGGTACGACATCACGTCCGATG
AACGTGTCAACATAATGGCACTTGATTTGGTTGTTCTAGCCAGTTTGGAACATGAACCTGTGATTTTCTAACTGTTGGAACTTGAACATTCTACCAATTCGGGTCTGATATGTCGGTAAT
AATTTTCCTGCAGGTGTTTTCTATTGTGGGAGTTCGGTGCTCACCAAAACACTGAGGAAGCTATGTCAAGAACTCAGCCTAGAGTCGTCAACTCGCTTCCAATTCCACAAGGAAAACTTT
TAG

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGAATATGCTTCTGCACAAAACGCAGGTTATTGGCACGACGCGGAAGAGGAATGTATCGTACGGCGGCATCCCTAGGATGGAAAGAACGGCATCCAGTGCCTCTCGAGGCCTCATGAGC
TTGAGGTTTCTGGATAGGACAATTACCGGGAAGGAAGGAGATGCCTGGAGATCAATCGAGAAGCGTTTCCATCAACACGCGACGAACGGCCAACTCTCGAGAGACAAATTTGGAGTCTGC
ATTGGAATGGGAGATTCCAAGGAATTTGCAGGAGAGTTATTCGACGCCTTATCAAGACGGAGGAAAGTGAATGCCGAGAATGGAATATCAATAGACCAATTGAGACAATTTTGGGAAGAC
ATGACGACTCGAGAACTCGAATCCCGACTGCAGATATTCTTTGATATGTGTGACAAGAATGGTGATGGGAGGCTAACTGAGGATGAGGTAAAAGAGGTGATAGTGTTGAGCGCCGCCTCG
AATAGGCTGTCAAATCTCCAGCAGCAAGCGGCATCTCACGCATCTCTGATCATGGAAAGACTTGATCCCGACCATCAAGGATACATCGAGATGTGGCAATTAAAGACTCTCCTGAGAGAA
ATGGTGAACCCTGATCAAAGGAGCAAGTCGTCAGTGAATTCTCAAAACCTGACCAGAACCATGCTTCCCAAAGGATACAGAAACCCAATGAGTCGGCTCGTGCACAAGAACATCGAAAGG
ATCCATGACAATTGGAGGCGAATATGGGTCGTCGGGCTGTGGCTGGTCGCAAACATGATCCTCTTCCTTTGGAAGTTTAACAAAACGAGGCACGGCCCCGCCTTTGACATCACGGGCTAT
TGTCTTTGCTACGCCAAGGGCTCTGCCGAGACACTCAATCTCAACATGGCTCTCGTCCTCCTCCCCGTATGCAGAAGAACTCTCACGAAGCTACGCTCGTCCTTCCTTGGTACCTTCATA
CCATTCGACGACAACATAAACTTCCACAAGATAATCGCGCTGGCCATAGCTATAGGATCTGTCGTTCACATTGCAATGCATTTTATGTGCAACTTCCCCAGGATAACTTCCTGCCCAAAA
TCACAATTCAAGCAAGTGTTTGGCCCGTACTTCCATAATAGGCAACCTCATTACATCGACTTGGTCAATAACTTGTCCAGCACCACCGGGGTTCTCATGTTCATGATGATGGCCTTCTCT
TTCACACTGGCGACTCATTGGTTCAGGAGAAACATCATCAAGCTACCGTGGGGGCTCCATCATTTAGCAGGATTTAATGCCTTCTGGTACGCACATCATTTGCTAGCCGTTGCCTATGTC
TTCTTCATACTTCACGGCTACTTCCTCGTGATCAGTCGACCTTGGTACACGAAAACGGCATGGATGTATGTGATGGTCCCAATCCTACTCTACACAAGCGAGAGAGCATTCACATCTGCT
TCTGAACTCCAACATCGAGTTGATATCGTTAAGGCCATTGTTTATTCTGGAAACGTCCTTGCATTGTACATGAGCAAGCCTCCAGGTTTCAACTACAACAGCGGAATGTACCTTTTCGTC
AAATGCCCTGATATATCAAAGTTCGAATGGCATCCTTTCTCCATTACTTCCGCACCGGGAGATGCCTTCTTGAGTGTTCACATGCGAGCCTTGGGCGATTGGACTACAGAGCTCAGGAAT
AGATTCGCCGAGGTTTGTGAGCCACCAAGTAAAAAACCAGGGAAGGGAGGTCTAACGAAGATGGCCACGAGAACATCCCACAACTTGGAAGAGTTACAAGAGAAGTTTCCAAAGATTTTC
ATCAAGGGGCCATACGGTGCTCCGGCTCAGGACTACGAGAAGTATGACATCCTCCTACTCATCGGTCTTGGCATCGGAGCGACTCCTTTCATCAGCATCATAAAAGATATCCTGAATCAC
GTCAAGTTGAATAAGCTCCAAGCAGATTCGGATCAAGATCAATCATCAGGGGCAAGAAAAGGTCCTAAAAGAGCATACTTTTACTGGGTTACGAGGGAACAAAACTCTTTCGAGTGGTTC
AAGGGCGTCATGGATGATATTGCAGAAAGAGACGATCATAATGTAATAGAGATGCACAACTACCTGACCTCTCTATATGAGGAAGGAGATGCGAGATCAGCACTCATTGCCATGGTCCAA
AAGTTGCAGCACGCGAAGAATGGTGTCGACATCTTCTCGGAAAGTCAGATAAAAACTCACTTTGCGAGGCCTAATTGGAGAAAGGTGTTCTCTGAAATTGCAATGCGGCACAAGTCGTCT
CGTATAGGTGTTTTCTATTGTGGGAGTTCGGTGCTCACCAAAACACTGAGGAAGCTATGTCAAGAACTCAGCCTAGAGTCGTCAACTCGCTTCCAATTCCACAAGGAAAACTTTTAG

Retrieve as FASTA