Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
136 (512) |
PWM (Da): |
14993 (55350.0) |
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PI (pH):
| 10.2 (4.45) |
Peptide Signal:
| cut: 23 range:23-534 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
VGVQPGAKVT YPIIANLNRE xKIKELNLVE PEEKDASGKQ VPSRALHIVG PDKKIKLSFL YPTSMGRNMD EVARVLDSLQ RAMKHKIATP CNWKPGDAVV ISLSISNEQA KEMSPQGFKT
ADLLSRKYYL RFTHID
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Retrieve as FASTA
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Remarks |
Pseudogene sequence from genomic (5' end is missing). No prediction from phytozome. No EST. complement(join(36613074..36613322,36613526..36613686)). |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GTTGGGGTGC AGCCCGGGGC CAAGGTGACA TACCCGATAA TCGCCAACCT GAATAGAGAA AAnAAAATCA AAGAGCTCAA CCTGGTCGAG CCAGAGGAGA AAGACGCTTC AGGGAAGCAA
GTCCCTTCTA GAGCTCTGCA CATCGTCGGT CCTGATAAGA AGGTATACAT GCCCTTCTAC CTTTTCCTTC TCCCGTTAAT TAAACTTGTA TCAAATGAAA CAAACTGCAT AAACCAATGC
CATCTTGTGC ATGTCTGTGA TATGTGTATT ACTTAAAGTA GCATAAACCA TTTATCCCAT TTAAACAGAA CAGATGCAGC AGGACTCTGG ATCATCTATT TTCACAATAT AACATAATTT
GTTAGATCAA GCTGAGTTTC CTGTACCCCA CGAGCATGGG AAGGAACATG GACGAGGTGG CGAGGGTGCT GGACTCCCTG CAGAGGGCGA TGAAGCACAA GATCGCCACC CCATGCAACT
GGAAGCCAGG GGACGCGGTC GTCATCTCGC TGTCCATCTC CAACGAGCAG GCCAAGGAGA TGTCCCCGCA GGGCTTCAAG ACCGCCGATC TTCTGTCCAG GAAGTATTAC CTCCGCTTCA
CTCATATCGA TTAG
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GTTGGGGTGC AGCCCGGGGC CAAGGTGACA TACCCGATAA TCGCCAACCT GAATAGAGAA AAnAAAATCA AAGAGCTCAA CCTGGTCGAG CCAGAGGAGA AAGACGCTTC AGGGAAGCAA
GTCCCTTCTA GAGCTCTGCA CATCGTCGGT CCTGATAAGA AGATCAAGCT GAGTTTCCTG TACCCCACGA GCATGGGAAG GAACATGGAC GAGGTGGCGA GGGTGCTGGA CTCCCTGCAG
AGGGCGATGA AGCACAAGAT CGCCACCCCA TGCAACTGGA AGCCAGGGGA CGCGGTCGTC ATCTCGCTGT CCATCTCCAA CGAGCAGGCC AAGGAGATGT CCCCGCAGGG CTTCAAGACC
GCCGATCTTC TGTCCAGGAA GTATTACCTC CGCTTCACTC ATATCGATTA G
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Retrieve as FASTA
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