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Entry information : CgrayDyPrx01
Entry ID 10196
Creation 2012-01-27 (Christophe Dunand)
Last sequence changes 2012-01-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-04-23 (Catherine Mathe (Scipio))
Peroxidase information: CgrayDyPrx01
Name CgrayDyPrx01
Class DyP-type peroxidase D    [Orthogroup: DyPrxD001]
Taxonomy Eukaryota Fungi Ascomycota Lecanoromycetes Cladoniaceae Cladonia
Organism Cladonia grayi    [TaxId: 27339 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CgrayDyPrx01
start..stop		 S start..stop
CsuDyPrx01 498 1.53e-172 1..403 1..376
CsuDyPrx01 252 2.92e-77 412..597 294..481
HanDyPrx01 428 3.9e-145 1..412 1..387
HanDyPrx01 234 1.95e-70 412..597 298..483
ShirDyPrx02 427 5.52e-145 1..411 1..390
ShirDyPrx02 218 4.51e-64 412..597 301..487
TvDyPrx01_other 423 2.14e-143 7..409 6..386
TvDyPrx01_other 243 1.05e-73 396..597 283..485
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 289041..289096 54 N° 2 288750..288990 239 N° 3 288364..288716 351 N° 4 287992..288305 312
N° 5 287654..287923 268 N° 6 287063..287398 334 N° 7 286955..287013 57 N° 8 286621..286803 181
complement(join(286621..286803,286955..287013,287063..287398,287654..287923,2879 92..288305,288364..288716,288750..288990,289041..289096))


exon

Literature and cross-references CgrayDyPrx01
DNA ref. JGI genome:   scaffold_35 (289096..286621)
Cluster/Prediction ref. JGI gene:   121732
Protein sequence: CgrayDyPrx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   603
PWM (Da):   %s   66172.73 Transmb domain:   %s   i7-26o
PI (pH):   %s   6.52
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSSSGPPPLDFNNIQGDILAGGLPKKTETFYFFQIDPAYVHEFRTHLTQLLPLITTSAQVVEELRPKIAQTKKNAAEEGTAPPIVEMAGVNIAFSHKGLRLETQYVTDSDVPPLQMGIND
KIGDSAFDAGMLAGAKDLGDQGTKSSSGAFSPNWIPAFKHDIHGVILIAGDSHKTVDAKLAQIENIFRVGAHHALIHEVYRTVGDVRPGKEKGHEHFGFLDGISNPAVQDVDTKPFPGQE
TIPQGIILLGREGDDTLTNPPKPVTRPPWALDGSFLSFRYLFQLVPEFNSFLKHNPIPEVLPRELGSELLGARMVGRWKGAPIDIVPTHDDPALGADPNRNNDFRFAFPDDQKTQDRCPF
AAHIRKTNPRADLEDLNPHATTPRRIMRQGIAFGREVTEAEKIFDKTLHGAPIDIVPTHDDPALGADPNRNNDFRFAFPDDQKTQDRCPFAAHIRKTNPRADLEDLNPHATTPRRIMRQG
IAFGREVTEAEKIFDKTLHGRGLLFAAYQSSLVNGFQFLQQSWANKTDFPPGKGTPGFDPIGQAPDGGPRSMSGTDPKSQGTGLRLPREWVVPKGGEYFFTPSVPALKETFALAESKSEL
*

Retrieve as FASTA  
Remarks Complete sequence from genomic (7 introns). Predicted protein is longer than other orthologs (
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCGTCTTCCGGTCCTCCTCCGTTGGACTTTAACAATATTCAAGGCGATATCCTGTAGGGCTATATCATGCTGTCTGGAAATTACGTGAACTTATACTTGACAGGGGGCAGGAGGTCT
TCCCAAGAAGACCGAGACATTCTACTTCTTCCAAATTGATCCTGCCTATGTCCATGAATTTCGGACGCATCTTACTCAGCTCTTGCCCTTGATCACAACAAGTGCCCAGGTCGTAGAGGA
GCTGAGGCCAAAGATCGCACAAACCAAGAAAAATGCGGCGGAAGAGGGTACCGCTCCGCCGATCGTGGAAATGGCTGGAGTCAACATAGCCTTTAGCCACAAAGGATTGGTCCTAGTAAG
TTACCTGCTATCATTTGATTAGCTCTCAGACTTGAAACCCAATATGTCACTGACTCGGACGTTCCACCCTTGCAGATGGGAATTAATGACAAGATCGGAGACTCTGCTTTCGATGCTGGC
ATGCTGGCTGGTGCAAAAGATCTTGGAGACCAAGGAACGAAGTCGTCCTCGGGTGCATTCAGTCCTAACTGGATTCCTGCTTTCAAGCATGACATTCACGGGGTGATATTGATTGCTGGA
GACAGCCATAAAACTGTCGATGCGAAACTAGCGCAGATCGAGAATATCTTCCGGGTTGGAGCGCATCATGCTCTCATTCATGAAGTATACCGTACGGTCGGTGATGTCCGCCCTGGAAAG
GAGAAAGGTCATGAGCAGTTCGTACCCGTCCTTTCTGTTTCGTGGATATCTTAACACCGCTGATGGCTGATCTAGCTCTTCGGCTTCCTCGACGGTATTTCCAATCCAGCAGTCCAGGAT
GTCGACACCAAACCCTTTCCTGGTCAAGAGACAATACCTCAGGGTATCATCCTCCTCGGCCGTGAGGGTGATGACACACTAACAAATCCACCAAAACCTGTTACTCGGCCACCTTGGGCT
TTAGATGGGAGTTTCCTTTCTTTTCGCTATCTCTTTCAGCTGGTCCCTGAATTCAATTCATTCCTGAAACATAATCCTATTCCGGAGGTGCTCCCTAGGGAATTAGGCAGTGAGCTGCTT
GGGGCCCGCATGGTAGGACGGTGGAAGAGTGGTATGTCGTTTTTACTTCTCATCTGTTGCAATTGTGATTGTTGCACTGGTTCTCATGGTAATCGCTAGGAGAGCGCCGATTGATATTGT
CCCAACGCACGACGACCCAGCACTTGGGGCGGACCCGAATCGAAACAACGACTTCCGATTCGCATTCCCCGACGACCAGAAGACTCAAGATAGATGCCCTTTCGCAGCGCATATCCGTAA
GACTAACCCTAGAGCTGACCTCGAAGACCTCAATCCGCACGCCACCACACCGCGTCGCATTATGCGGCAAGGTATTGCATTTGGGCGTGAAGTTACCGAGGCCGAAAAGATCTTTGATAA
GACACTCCATGGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTGCTTGGGGCCCGCATGGTAGGACGGTGGAAGAGTGGTATGTCGTTTTACTTCTCATCTGTTGCAATTGTGATTGTT
GCACTGGTTCTCATGGTAATCGCTAGGAGAGCGCCGATTGATATTGTCCCAACGCACGACGACCCAGCACTTGGGGCGGACCCGAATCGAAACAACGACTTCCGATTCGCGTTCCCCGAC
GACCAGAAGACTCAAGATAGATGCCCTTTCGCAGCGCATATCCGTAAGACTAACCCCAGAGCTGACCTCGAAGACCTCAATCCGCACGCCACCACACCGCGTCGCATTATGCGGCAAGGT
ATTGCATTCGGGCGTGAAGTTACCGAGGCCGAAAAGATCTTTGATAAGACACTCCATGGCCGCGGACTTCTCTTTGCAGCGTACCAAAGTAGTCTCGTGAATGGGTTCCAATTCTTACAG
CAATGTAGGTCATCTCCGCACCACTTTGATGACTGCTTACTGATCGTCTTTAGCTCTTGGGCGAATAAGACTGATTTCCCACCTGGTAAGGGAACGCCAGGGTTTGACCCGATTGTAAGT
CTATTTGCGAGCTATTATGCGTCGTCACTTGCTTGATTAACCGCCGAGACATGGCTGGAAAATCAAAGTCTCTTTCCAACTGCCAAGGCTCCTGGTCTAATCCAAGAGACATCGAGCAAG
CACAAGCTAATATCAGTATCTCTAGATATTGGTCAGGCCCCTGACGGAGGACCGCGTTCGATGTCGGGCACGGATCCTAAGAGTCAGGGTACCGGGCTTCGTTTGCCACGGGAGTGGGTC
GTGCCGAAAGGCGGCGAATATTTCTTCACACCTTCTGTTCCTGCCCTCAAAGAGACTTTCGCATTGGCAGAATCGAAGTCTGAGCTATGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCGTCTTCCGGTCCTCCTCCGTTGGACTTTAACAATATTCAAGGCGATATCCTGGCAGGAGGTCTTCCCAAGAAGACCGAGACATTCTACTTCTTCCAAATTGATCCTGCCTATGTC
CATGAATTTCGGACGCATCTTACTCAGCTCTTGCCCTTGATCACAACAAGTGCCCAGGTCGTAGAGGAGCTGAGGCCAAAGATCGCACAAACCAAGAAAAATGCGGCGGAAGAGGGTACC
GCTCCGCCGATCGTGGAAATGGCTGGAGTCAACATAGCCTTTAGCCACAAAGGATTGCTCAGACTTGAAACCCAATATGTCACTGACTCGGACGTTCCACCCTTGCAGATGGGAATTAAT
GACAAGATCGGAGACTCTGCTTTCGATGCTGGCATGCTGGCTGGTGCAAAAGATCTTGGAGACCAAGGAACGAAGTCGTCCTCGGGTGCATTCAGTCCTAACTGGATTCCTGCTTTCAAG
CATGACATTCACGGGGTGATATTGATTGCTGGAGACAGCCATAAAACTGTCGATGCGAAACTAGCGCAGATCGAGAATATCTTCCGGGTTGGAGCGCATCATGCTCTCATTCATGAAGTA
TACCGTACGGTCGGTGATGTCCGCCCTGGAAAGGAGAAAGGTCATGAGCACTTCGGCTTCCTCGACGGTATTTCCAATCCAGCAGTCCAGGATGTCGACACCAAACCCTTTCCTGGTCAA
GAGACAATACCTCAGGGTATCATCCTCCTCGGCCGTGAGGGTGATGACACACTAACAAATCCACCAAAACCTGTTACTCGGCCACCTTGGGCTTTAGATGGGAGTTTCCTTTCTTTTCGC
TATCTCTTTCAGCTGGTCCCTGAATTCAATTCATTCCTGAAACATAATCCTATTCCGGAGGTGCTCCCTAGGGAATTAGGCAGTGAGCTGCTTGGGGCCCGCATGGTAGGACGGTGGAAG
AGTGGAGCGCCGATTGATATTGTCCCAACGCACGACGACCCAGCACTTGGGGCGGACCCGAATCGAAACAACGACTTCCGATTCGCATTCCCCGACGACCAGAAGACTCAAGATAGATGC
CCTTTCGCAGCGCATATCCGTAAGACTAACCCTAGAGCTGACCTCGAAGACCTCAATCCGCACGCCACCACACCGCGTCGCATTATGCGGCAAGGTATTGCATTTGGGCGTGAAGTTACC
GAGGCCGAAAAGATCTTTGATAAGACACTCCATGGAGCGCCGATTGATATTGTCCCAACGCACGACGACCCAGCACTTGGGGCGGACCCGAATCGAAACAACGACTTCCGATTCGCGTTC
CCCGACGACCAGAAGACTCAAGATAGATGCCCTTTCGCAGCGCATATCCGTAAGACTAACCCCAGAGCTGACCTCGAAGACCTCAATCCGCACGCCACCACACCGCGTCGCATTATGCGG
CAAGGTATTGCATTCGGGCGTGAAGTTACCGAGGCCGAAAAGATCTTTGATAAGACACTCCATGGCCGCGGACTTCTCTTTGCAGCGTACCAAAGTAGTCTCGTGAATGGGTTCCAATTC
TTACAGCAATCTTGGGCGAATAAGACTGATTTCCCACCTGGTAAGGGAACGCCAGGGTTTGACCCGATTATTGGTCAGGCCCCTGACGGAGGACCGCGTTCGATGTCGGGCACGGATCCT
AAGAGTCAGGGTACCGGGCTTCGTTTGCCACGGGAGTGGGTCGTGCCGAAAGGCGGCGAATATTTCTTCACACCTTCTGTTCCTGCCCTCAAAGAGACTTTCGCATTGGCAGAATCGAAG
TCTGAGCTATGA

Retrieve as FASTA