View Redoxidase 1020

Entry information : OsPrx10(LOC_Os01g18970)

Entry ID	1020
Creation	2005-06-16 (Filippo Passardi)
Last sequence changes	2005-06-16 (Filippo Passardi)
Sequence status	complete
Reviewer	Christophe Dunand
Last annotation changes	2010-08-03 (Marie Brette (Scipio))

Peroxidase information: OsPrx10(LOC_Os01g18970)

Name

OsPrx10(LOC_Os01g18970)

Class

Class III peroxidase [Orthogroup: Prx337]

Taxonomy

Viridiplantae (green plants); Streptophyta; Angiospermae; Monocotyledons

Organism

Oryza sativa ssp japonica cv Nipponbare [TaxId: 39947 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	OsPrx10 start..stop	S start..stop
OsPrx09	575	0	1..344	1..347
SbPrx58	353	8.79e-122	1..345	1..345
SiPrx08	350	2.61e-120	23..345	24..345
ZmPrx44	346	5.65e-119	1..345	1..345

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '1020' 'complement(join(10718495..10719301,10719469..10719699))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	10719469..10719699	229	N° 2	10718495..10719301	805
complement(join(10718495..10719301,10719469..10719699))

Literature and cross-references OsPrx10(LOC_Os01g18970)

Literature	Passardi F., Longet, D., Penel C. and Dunand, C. The class III peroxidase multigenic family in rice and its evolution in land plants Phytochemistry, 65 (13), 1879-1893 (2004)
Protein ref.	UniProtKB: Q5U1T3
DNA ref.	GenBank: NC_008394.1 (10719699..10718498)

Protein sequence: OsPrx10(LOC_Os01g18970)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	345 (326)
PWM (Da):	36199.25 (34223.2)	Transmb domain:	i12-34o
PI (pH):	5.38 (4.97)	Peptide Signal:	cut: 20 range:20-345

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MKVFMAVCMLAVAVRLAAAIVVPSAAPCALTVGFYNGKCGNVSVE
SVVYDTVKAFLDADKSKGAALVRLLFHDCFVNGCDGSILLDNSTTNPSPEKFAGANLGIAGLDVIDAVKAKLETACPGVVSCADIVVFAGRDASRYMSNGGVNFDVPAGRLDGIVSSSVDAQNTLPDSKADIGKLIANFAAKGFTPEELVIL
SGAHSIGKAHCSNFDDRLTAPDSEINADYRDNVLSKTCKSAPNPTLANNIRDIDAATLGDLASYVVPAVGGDYLDNSYYKNNKNNLVLFNSDWALVGSNATLQHVNEYAENGTLWNIDFA
QALVKLSKLAMPAGSVRQIRKTCRAINY*

Retrieve as FASTA

Remarks

chromosome 1. No ESTs (NIAS DNA database and TIGR)

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGAAGGTTTTCATGGCAGTGTGCATGTTGGCGGTGGCCGTCCGGCTAGCCGCCGCCATCGTGGTGCCGTCGGCGGCGCCGTGCGCGTTGACGGTGGGTTTCTACAATGGCAAGTGCGGC
AACGTCAGCGTCGAGTCCGTCGTGTACGATACTGTGAAGGCCTTCCTCGATGCTGACAAATCCAAGGGCGCCGCCCTCGTGCGCCTGTTGTTCCATGACTGCTTCGTCAATGTAAACACG
ATATGCTCCCGGAAATTACACCATGCGTGCTCTAATCACAATTATTTTGATGGTTAATTTGCTAGTATTTATCAGTCGTCTGATTAATTTTTAGTGTGCTATGTTTATATTTATCTGTGA
CTGAATGTTAATATCTGTACTGTTGTTTTTTACATTAGGGGGGTGTGACGGATCGATCCTTCTTGATAATTCGACCACAAATCCTTCACCGGAGAAGTTCGCCGGTGCGAACCTCGGCAT
CGCCGGGCTCGACGTGATCGACGCGGTCAAGGCCAAGCTCGAGACCGCATGCCCCGGCGTCGTCTCCTGCGCCGACATCGTCGTGTTCGCTGGCCGCGACGCGTCGAGGTACATGAGCAA
CGGCGGCGTCAACTTCGACGTCCCGGCCGGCCGCCTCGACGGCATCGTCTCGTCCTCCGTGGACGCCCAAAATACGCTCCCTGACTCCAAGGCCGACATTGGCAAGCTCATCGCCAACTT
CGCGGCGAAGGGGTTCACCCCGGAGGAGCTGGTCATCCTCTCCGGCGCGCACTCCATCGGCAAGGCGCACTGCTCCAACTTCGACGACCGCCTCACCGCGCCGGACTCCGAGATCAACGC
CGACTACCGCGACAACGTCCTGAGCAAGACCTGCAAATCCGCCCCGAACCCGACGCTGGCGAACAACATCCGCGACATCGACGCGGCGACGCTGGGGGACCTGGCGAGCTACGTCGTGCC
GGCCGTCGGCGGCGACTACCTGGACAACAGCTACTACAAGAACAACAAGAACAACCTGGTGCTGTTCAACTCCGACTGGGCGCTCGTCGGCAGCAACGCCACGCTCCAGCACGTCAACGA
GTACGCCGAGAACGGCACGCTCTGGAACATCGACTTCGCGCAGGCGCTCGTCAAGCTCAGCAAGCTGGCCATGCCGGCGGGCAGCGTCCGCCAGATCAGGAAGACGTGCCGCGCCATCAA
CTATTAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGAAGGTTTTCATGGCAGTGTGCATGTTGGCGGTGGCCGTCCGGCTAGCCGCCGCCATCGTGGTGCCGTCGGCGGCGCCGTGCGCGTTGACGGTGGGTTTCTACAATGGCAAGTGCGGC
AACGTCAGCGTCGAGTCCGTCGTGTACGATACTGTGAAGGCCTTCCTCGATGCTGACAAATCCAAGGGCGCCGCCCTCGTGCGCCTGTTGTTCCATGACTGCTTCGTCAATGGGTGTGAC
GGATCGATCCTTCTTGATAATTCGACCACAAATCCTTCACCGGAGAAGTTCGCCGGTGCGAACCTCGGCATCGCCGGGCTCGACGTGATCGACGCGGTCAAGGCCAAGCTCGAGACCGCA
TGCCCCGGCGTCGTCTCCTGCGCCGACATCGTCGTGTTCGCTGGCCGCGACGCGTCGAGGTACATGAGCAACGGCGGCGTCAACTTCGACGTCCCGGCCGGCCGCCTCGACGGCATCGTC
TCGTCCTCCGTGGACGCCCAAAATACGCTCCCTGACTCCAAGGCCGACATTGGCAAGCTCATCGCCAACTTCGCGGCGAAGGGGTTCACCCCGGAGGAGCTGGTCATCCTCTCCGGCGCG
CACTCCATCGGCAAGGCGCACTGCTCCAACTTCGACGACCGCCTCACCGCGCCGGACTCCGAGATCAACGCCGACTACCGCGACAACGTCCTGAGCAAGACCTGCAAATCCGCCCCGAAC
CCGACGCTGGCGAACAACATCCGCGACATCGACGCGGCGACGCTGGGGGACCTGGCGAGCTACGTCGTGCCGGCCGTCGGCGGCGACTACCTGGACAACAGCTACTACAAGAACAACAAG
AACAACCTGGTGCTGTTCAACTCCGACTGGGCGCTCGTCGGCAGCAACGCCACGCTCCAGCACGTCAACGAGTACGCCGAGAACGGCACGCTCTGGAACATCGACTTCGCGCAGGCGCTC
GTCAAGCTCAGCAAGCTGGCCATGCCGGCGGGCAGCGTCCGCCAGATCAGGAAGACGTGCCGCGCCATCAACTATTAA

Retrieve as FASTA