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Entry information : PgigDyPrx (DyP)
Entry ID 10211
Creation 2012-01-27 (Christophe Dunand)
Last sequence changes 2012-01-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-03-27 (Catherine Mathe (Scipio))
Peroxidase information: PgigDyPrx (DyP)
Name (synonym) PgigDyPrx (DyP)
Class DyP-type peroxidase D    [Orthogroup: DyPrxD003]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Phanerochaetaceae Phlebiopsis
Organism Phlebiopsis gigantea    [TaxId: 82310 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PgigDyPrx
start..stop		 S start..stop
PgigDyPrx04 667 0 10..531 2..526
PplDyPrx01 447 2.42e-150 15..528 11..544
BaDyPrx07 429 1.58e-144 15..528 11..496
PplDyPrx02 373 1.08e-122 15..525 11..510
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '10211' 'complement(join(223772..224034,224085..224238,224288..224518,224574..224880,224932..225085,225139..225454,225509..225676))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 225509..225676 166 N° 2 225139..225454 314 N° 3 224932..225085 152 N° 4 224574..224880 305
N° 5 224288..224518 229 N° 6 224085..224238 152 N° 7 223772..224034 261  
complement(join(223772..224034,224085..224238,224288..224518,224574..224880,2249 32..225085,225139..225454,225509..225676))


exon

Literature and cross-references PgigDyPrx (DyP)
DNA ref. JGI genome:   scaffold_19 (225676..223772)
Cluster/Prediction ref. JGI gene:   125681
Protein sequence: PgigDyPrx (DyP)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   530 (293)
PWM (Da):   %s   58778.01 (31338.4)  
PI (pH):   %s   6.91 (7.12) Peptide Signal:   %s   cut: 26 range:26-318
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MTSYQQSKSLTTELLEHISKRPLLPAPRSPGQAASFTNNLPDPKNIQGDVYLTFPRDSEKLLFFTVTDPTLFLKNLAKYKPTTTDDVVHISLWKIAEAKAAGERAVVIQSQIAFTREGLD
ILGHKEPIQDDAFDVRSEPQSDADAPFNSKVFHGVFLVGACAKRTADEGAQAILDIFGNSMSVDVLEGNSRPDKERGHEHFGWKDGISQPALRGLVMPQKGQPQCDAGVVIMGYPGDRLY
NHPRIVRPSWSRGGSLMVFRKMKQLVPEFRKYVNDAGGKWTEWMPKAEVPKIQPPLSDIEGAALFGARLFGRWKSGAPLARALHRDDPSQTTADKMNDFDYIVDGEDNPTQTLCPFTAHI
RKTVPRNLEPFATKPFLESTLLVRSGIPYGPEVDSNVEKEKTVHDRGLLFICYQSTLGNGFIAQQSWTRNDYFPTINFEVNKWGQDSVIGQPPPPKTVVQVAMSGHKIPKGEISLEVQSN
PPDAASITVVDGFANDLVKPAVEPQFFVQDRGGAFFFVPSVETLRLWARA*

Retrieve as FASTA  
Remarks Compleet sequence from genomic (6 introns)
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACCAGTTACCAGCAGTCCAAGTCGCTTACCACGGAGCTGCTGGAACATATTTCCAAGCGGCCCCTTCTTCCAGCGCCTCGTTCCCCGGGCCAGGCGGCGTCGTTCACCAACAACTTG
CCCGACCCCAAGAACATCCAAGGCGACGTTTACCTGACCTTCCCGAGGGTGGGTGGCACGAACTCCTCGTAGTGCCCTTATAGTCACTAACGCACGCTTCAGGAGACTCGGAGAAGCTGC
TGTTCTTTACGGTCACTGACCCCACTCTATTCCTCAAGAACCTCGCCAAATACAAACCCACCACGACCGACGATGTCGTGCACATCAGCCTTTGGAAGATAGCCGAGGCCAAGGCGGCGG
GCGAGCGCGCGGTAGTCATCCAGTCTCAGATCGCCTTCACTCGCGAGGGCCTCGACATCCTCGGCCACAAGGAGCCCATACAAGATGATGCCTTTGACGTACGCTCTGAACCCCAGAGCG
ACGCGGATGCACCCTTCAATAGCAAGGTCTTCCACGGCGTCTTCCTGGTCGGCGCATGCGGTACAGTGTTCCTCTGCACTGTTCCACATCGTGTAACATATTCTCCGGTACAGCTCTAAG
CGGACTGCAGACGAAGGCGCACAAGCGATCCTCGACATATTCGGCAATTCCATGTCGGTAGATGTCCTCGAGGGCAATTCCCGTCCTGACAAAGAGCGCGGCCACGAGCACTTTGGCTGG
AAGGACGGTATTTCCCAGCCTGCGCTACGGTCAGCGCGTTTCGTTCTTTCCGGAGCACCATCTAACAATCGCTCCCTCAGTGTGGATTGGTCATGCCGCAGAAGGGCCAGCCTCAGTGCG
ACGCGGGAGTGGTCATCATGGGCTACCCTGGAGACCGGCTTTATAACCACCCCCGCATCGTGCGGCCGTCCTGGTCCAGGGGTGGCTCCCTCATGGTGTTCCGTAAGATGAAACAGCTGG
TCCCTGAGTTCAGGAAGTACGTCAACGACGCCGGAGGTAAATGGACCGAGTGGATGCCCAAGGCCGAGGTGCCGAAGATCCAACCTCCCCTATCTGACATAGAGGGTGCGGCACTCTTCG
GGGCCCGCTTATTTGGCCGTTGGAAGTCGGTGAGTCTCTGTAATCTATGGTCGCAGACTACGTATGGTGCTCACGTCTGCGTAGGGGGTGCGCCACTTGCTAGGGCACTGCATCGCGACG
ACCCCAGCCAAACCACCGCAGACAAAATGAACGACTTCGACTACATTGTCGACGGCGAAGACAATCCTACACAGACGCTCTGCCCGTTCACGGCCCACATCCGCAAGACTGTTCCCAGGA
ATCTCGAGCCGTTTGCCACGAAGCCTTTCCTGGAATCGACACTCCTCGTCCGGTCGGGCATACCCTACGGTCCTGAGGTGCGTTCAAGTGCGCGTCCAGAGAACGATGACACTGACGCGC
ATACAGGTGTCGATAGCAACGTGGAGAAGGAAAAGACAGTGCATGACCGCGGCCTACTATTTATTTGCTACCAGTCGACGCTTGGGAACGGTTTCATAGCTCAGCAGTCTTGGACGCGTA
ACGATTATTTCCCCACGATCAATTTTGAGGTCAATAAATGGGGTACGGACTCAATTTTCTTCGCTCAAGTCAGACTGTTGACGTGGGTATAGGCGCCAGGACAGTGTGATCGGTCAGCCT
CCGCCGCCGAAGACGGTTGTACAGGTGGCGATGTCAGGGCACAAGATCCCCAAGGGTGAGATTTCGCTCGAGGTGCAGAGCAACCCGCCGGATGCTGCGAGCATTACCGTCGTCGATGGA
TTTGCAAACGACTTGGTGAAACCGGCGGTTGAGCCTCAGTTCTTTGTGCAGGATCGCGGGGGTGCCTTCTTCTTTGTACCGTCTGTGGAAACTCTCAGATTGTGGGCGCGAGCTTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACCAGTTACCAGCAGTCCAAGTCGCTTACCACGGAGCTGCTGGAACATATTTCCAAGCGGCCCCTTCTTCCAGCGCCTCGTTCCCCGGGCCAGGCGGCGTCGTTCACCAACAACTTG
CCCGACCCCAAGAACATCCAAGGCGACGTTTACCTGACCTTCCCGAGGGACTCGGAGAAGCTGCTGTTCTTTACGGTCACTGACCCCACTCTATTCCTCAAGAACCTCGCCAAATACAAA
CCCACCACGACCGACGATGTCGTGCACATCAGCCTTTGGAAGATAGCCGAGGCCAAGGCGGCGGGCGAGCGCGCGGTAGTCATCCAGTCTCAGATCGCCTTCACTCGCGAGGGCCTCGAC
ATCCTCGGCCACAAGGAGCCCATACAAGATGATGCCTTTGACGTACGCTCTGAACCCCAGAGCGACGCGGATGCACCCTTCAATAGCAAGGTCTTCCACGGCGTCTTCCTGGTCGGCGCA
TGCGCTAAGCGGACTGCAGACGAAGGCGCACAAGCGATCCTCGACATATTCGGCAATTCCATGTCGGTAGATGTCCTCGAGGGCAATTCCCGTCCTGACAAAGAGCGCGGCCACGAGCAC
TTTGGCTGGAAGGACGGTATTTCCCAGCCTGCGCTACGTGGATTGGTCATGCCGCAGAAGGGCCAGCCTCAGTGCGACGCGGGAGTGGTCATCATGGGCTACCCTGGAGACCGGCTTTAT
AACCACCCCCGCATCGTGCGGCCGTCCTGGTCCAGGGGTGGCTCCCTCATGGTGTTCCGTAAGATGAAACAGCTGGTCCCTGAGTTCAGGAAGTACGTCAACGACGCCGGAGGTAAATGG
ACCGAGTGGATGCCCAAGGCCGAGGTGCCGAAGATCCAACCTCCCCTATCTGACATAGAGGGTGCGGCACTCTTCGGGGCCCGCTTATTTGGCCGTTGGAAGTCGGGTGCGCCACTTGCT
AGGGCACTGCATCGCGACGACCCCAGCCAAACCACCGCAGACAAAATGAACGACTTCGACTACATTGTCGACGGCGAAGACAATCCTACACAGACGCTCTGCCCGTTCACGGCCCACATC
CGCAAGACTGTTCCCAGGAATCTCGAGCCGTTTGCCACGAAGCCTTTCCTGGAATCGACACTCCTCGTCCGGTCGGGCATACCCTACGGTCCTGAGGTCGATAGCAACGTGGAGAAGGAA
AAGACAGTGCATGACCGCGGCCTACTATTTATTTGCTACCAGTCGACGCTTGGGAACGGTTTCATAGCTCAGCAGTCTTGGACGCGTAACGATTATTTCCCCACGATCAATTTTGAGGTC
AATAAATGGGGCCAGGACAGTGTGATCGGTCAGCCTCCGCCGCCGAAGACGGTTGTACAGGTGGCGATGTCAGGGCACAAGATCCCCAAGGGTGAGATTTCGCTCGAGGTGCAGAGCAAC
CCGCCGGATGCTGCGAGCATTACCGTCGTCGATGGATTTGCAAACGACTTGGTGAAACCGGCGGTTGAGCCTCAGTTCTTTGTGCAGGATCGCGGGGGTGCCTTCTTCTTTGTACCGTCT
GTGGAAACTCTCAGATTGTGGGCGCGAGCTTAA

Retrieve as FASTA