Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
506 |
PWM (Da): |
53972.49 |
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PI (pH):
| 5.06 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MRLVPLLTAALSFLQPHRDVLGAAAPENHLTERQSSGRSTPLLATFPGQAVLPTLQEILTLNATNGTFLPLQNIQGDILVGMKKQTERLVFFQINSASGFRSALKTYLPQITSTATLISPAANQPLAFVNIGFSQTGLTALGITDDLNDAEFASGMWADAANLGDDPSKWVSPFKGTAIHGVFVLGSDASYLDQYQSAISSTFGSSISVLTTISGAARPGDQAGHEHFGFLDGISQPAIGGWTTNTLPGQAIVPNGVILARRLGDTATRPSWALDGTFMAFRWFQQLVPEFNKWTLDNAVQPPPLAGVTLNAQDAADFLGARMFGRWKSGAPLDLAPTVDDPALGADPQRNNLFDYGDALLDETKCPFSAHIRKTNPRLDLPLLSINNHAIRSSIAYGPEVSASESASNTTSQDRGLIFVEYQSVIANGFRFQQIAWANTANFPPAKLETPGLDAVIGQGTPRTSGGLDPNNQTKMFTVPQFVVPKGGEYFFVPSIPALTSEFAT |
Retrieve as FASTA
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Remarks |
Partials eqiuence from genomic (5 introns). Incorrect predictions from JGI => first exon is missing. |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGCGTCTTGTGCCTCTCCTCACCGCTGCACTATCATTCCTCCAGCCCCATCGAGATGTCCTCGGTGCAGCTGCTCCCGAGAACCACCTGACAGAGAGGCAGTCGTCTGGAAGGTCAACG CCCTTGCTCGCTAGTGAGTCACCTCTAGGATGGGGCTGCTCGTGATCCTTCTCTCATACTCTTTTCCCACGTAGCGTTTCCTGGACAGGCTGTGCTGCCTACGCTCCAGGAGATTCTCAC TCTGAATGCCACCAACGGGACCTTTCTCCCACTGCAGAATATTCAGGGTGATATCCTGTACGTTACCGACCCGCCTTGCGCCCGAGAACATACCTTACTGACATATTGTATGCAGAGTTG GCATGAAGAAGCAGACAGAAAGACTAGTGTTCTTCCAGATCAATAGCGCCAGTGGCTTCAGGAGCGCCCTCAAAACATACCTTCCCCAGATTACGTCTACTGCCACTCTCATCTCCCCTG CTGCGAACCAGCCCCTTGCCTTCGTCAACATCGGGTTCTCTCAGACGGGGCTCACTGCCCTTGGGATTACAGACGACCTTAATGACGCAGAATTCGCCTCGGGAATGTGGGCCGACGCTG CCAACCTCGGCGATGATCCCTCCAAGTGGGTCTCGCCGTTCAAGGGCACCGCCATCCATGGAGTATTTGTTCTCGGCAGCGACCAGGTGGGTCTCCGCTCAAAACCTAGCACTCGTGTCT GACCTCTTGCATCGGAAGGCTTCATACCTCGACCAATATCAGAGCGCGATCTCGTCGACGTTTGGCAGCTCAATCTCCGTCTTGACCACCATCAGCGGCGCTGCACGCCCCGGTGATCAG GCCGGACACGAACGTCAGAGTTTTGTACCCCACTATGTTTGGTGTTCGGTCTGACCTTTGTTGGCTTCCAGATTTTGGATTCCTGGATGGTATCTCCCAACCCGCCATTGGAGGGTGGAC GACCAACACCCTTCCTGGTCAGGCCATCGTGCCCAACGGCGTGATCCTAGCCCGCCGCCTCGGCGACACGGCAACGCGGCCCTCGTGGGCACTGGACGGCACCTTCATGGCGTTCCGCTG GTTCCAGCAGCTCGTGCCCGAGTTCAACAAGTGGACGCTCGACAACGCCGTGCAGCCTCCGCCGTTGGCGGGCGTCACGCTCAACGCACAGGACGCGGCGGACTTCCTCGGCGCGCGCAT GTTCGGGCGCTGGAAGAGCGGCGCGCCGCTCGACCTCGCGCCGACGGTGGACGACCCCGCCCTCGGCGCGGACCCGCAGCGGAACAACTTGTTCGATTATGGCGACGCACTGCTCGACGA GACCAAGTGCCCGTTCAGCGCGCATATACGCAAGACGAACCCCCGTCTCGACTTGCCGCTCCTCTCGATCAACAACCATGCCATTCGCTCGAGCATCGCGTACGGACCTGAGGTGTCTGC GTCGGAGTCCGCTTCGAATACGACTTCTCAAGACCGGGGCTTAATCTTCGGTGAGTGTTGGAGTACTGTCTTGTTTGAGAATGCACTCTAACCGCCATGCGTAGTCGAATATCAATCAGT GATAGCCAACGGCTTCCGCTTCCAGCAGATTGCGTGGGCTAACACGGCCAAGTACGTCCTTTCCAGCACAGACACTGGCAAAAACGACTCAGAGTTGACGTGCACACAGCTTCCCGCCCG CAAAGCTGGAGACACCTGGACTCGACGCCGTCATTGGGCAAGGCACCCCGCGTACGTCGGGCGGACTCGACCCGAACAATCAGACGAAGATGTTCACCGTGCCCCAGTTCGTCGTGCCCA AGGGCGGGGAGTACTTCTTCGTCCCGTCCATCCCTGCGCTTACGAGCGAGTTCGCAACCTGA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGCGTCTTGTGCCTCTCCTCACCGCTGCACTATCATTCCTCCAGCCCCATCGAGATGTCCTCGGTGCAGCTGCTCCCGAGAACCACCTGACAGAGAGGCAGTCGTCTGGAAGGTCAACG CCCTTGCTCGCTACGTTTCCTGGACAGGCTGTGCTGCCTACGCTCCAGGAGATTCTCACTCTGAATGCCACCAACGGGACCTTTCTCCCACTGCAGAATATTCAGGGTGATATCCTAGTT GGCATGAAGAAGCAGACAGAAAGACTAGTGTTCTTCCAGATCAATAGCGCCAGTGGCTTCAGGAGCGCCCTCAAAACATACCTTCCCCAGATTACGTCTACTGCCACTCTCATCTCCCCT GCTGCGAACCAGCCCCTTGCCTTCGTCAACATCGGGTTCTCTCAGACGGGGCTCACTGCCCTTGGGATTACAGACGACCTTAATGACGCAGAATTCGCCTCGGGAATGTGGGCCGACGCT GCCAACCTCGGCGATGATCCCTCCAAGTGGGTCTCGCCGTTCAAGGGCACCGCCATCCATGGAGTATTTGTTCTCGGCAGCGACCAGGCTTCATACCTCGACCAATATCAGAGCGCGATC TCGTCGACGTTTGGCAGCTCAATCTCCGTCTTGACCACCATCAGCGGCGCTGCACGCCCCGGTGATCAGGCCGGACACGAACATTTTGGATTCCTGGATGGTATCTCCCAACCCGCCATT GGAGGGTGGACGACCAACACCCTTCCTGGTCAGGCCATCGTGCCCAACGGCGTGATCCTAGCCCGCCGCCTCGGCGACACGGCAACGCGGCCCTCGTGGGCACTGGACGGCACCTTCATG GCGTTCCGCTGGTTCCAGCAGCTCGTGCCCGAGTTCAACAAGTGGACGCTCGACAACGCCGTGCAGCCTCCGCCGTTGGCGGGCGTCACGCTCAACGCACAGGACGCGGCGGACTTCCTC GGCGCGCGCATGTTCGGGCGCTGGAAGAGCGGCGCGCCGCTCGACCTCGCGCCGACGGTGGACGACCCCGCCCTCGGCGCGGACCCGCAGCGGAACAACTTGTTCGATTATGGCGACGCA CTGCTCGACGAGACCAAGTGCCCGTTCAGCGCGCATATACGCAAGACGAACCCCCGTCTCGACTTGCCGCTCCTCTCGATCAACAACCATGCCATTCGCTCGAGCATCGCGTACGGACCT GAGGTGTCTGCGTCGGAGTCCGCTTCGAATACGACTTCTCAAGACCGGGGCTTAATCTTCGTCGAATATCAATCAGTGATAGCCAACGGCTTCCGCTTCCAGCAGATTGCGTGGGCTAAC ACGGCCAACTTCCCGCCCGCAAAGCTGGAGACACCTGGACTCGACGCCGTCATTGGGCAAGGCACCCCGCGTACGTCGGGCGGACTCGACCCGAACAATCAGACGAAGATGTTCACCGTG CCCCAGTTCGTCGTGCCCAAGGGCGGGGAGTACTTCTTCGTCCCGTCCATCCCTGCGCTTACGAGCGAGTTCGCAACCTGA |
Retrieve as FASTA
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