Sequence Properties
first value : protein
second value (mature protein)
|
Length (aa):  |
506 |
| PWM (Da): |
53972.49 |
|
| PI (pH):
| 5.06 |
|
Sequence
Send to BLAST
Send to Peroxiscan
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MRLVPLLTAALSFLQPHRDVLGAAAPENHLTERQSSGRSTPLLATFPGQAVLPTLQEILTLNATNGTFLPLQNIQGDILVGMKKQTERLVFFQINSASGFRSALKTYLPQITSTATLISPAANQPLAFVNIGFSQTGLTALGITDDLNDAEFASGMWADAANLGDDPSKWVSPFKGTAIHGVFVLGSDASYLDQYQSAISSTFGSSISVLTTISGAARPGDQAGHEHFGFLDGISQPAIGGWTTNTLPGQAIVPNGVILARRLGDTATRPSWALDGTFMAFRWFQQLVPEFNKWTLDNAVQPPPLAGVTLNAQDAADFLGARMFGRWKSGAPLDLAPTVDDPALGADPQRNNLFDYGDALLDETKCPFSAHIRKTNPRLDLPLLSINNHAIRSSIAYGPEVSASESASNTTSQDRGLIFVEYQSVIANGFRFQQIAWANTANFPPAKLETPGLDAVIGQGTPRTSGGLDPNNQTKMFTVPQFVVPKGGEYFFVPSIPALTSEFAT |
Retrieve as FASTA
|
|
| Remarks |
Partials eqiuence from genomic (5 introns). Incorrect predictions from JGI => first exon is missing. |
DNA ►
Send to BLAST
|
| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGCGTCTTGTGCCTCTCCTCACCGCTGCACTATCATTCCTCCAGCCCCATCGAGATGTCCTCGGTGCAGCTGCTCCCGAGAACCACCTGACAGAGAGGCAGTCGTCTGGAAGGTCAACG
CCCTTGCTCGCTAGTGAGTCACCTCTAGGATGGGGCTGCTCGTGATCCTTCTCTCATACTCTTTTCCCACGTAGCGTTTCCTGGACAGGCTGTGCTGCCTACGCTCCAGGAGATTCTCAC
TCTGAATGCCACCAACGGGACCTTTCTCCCACTGCAGAATATTCAGGGTGATATCCTGTACGTTACCGACCCGCCTTGCGCCCGAGAACATACCTTACTGACATATTGTATGCAGAGTTG
GCATGAAGAAGCAGACAGAAAGACTAGTGTTCTTCCAGATCAATAGCGCCAGTGGCTTCAGGAGCGCCCTCAAAACATACCTTCCCCAGATTACGTCTACTGCCACTCTCATCTCCCCTG
CTGCGAACCAGCCCCTTGCCTTCGTCAACATCGGGTTCTCTCAGACGGGGCTCACTGCCCTTGGGATTACAGACGACCTTAATGACGCAGAATTCGCCTCGGGAATGTGGGCCGACGCTG
CCAACCTCGGCGATGATCCCTCCAAGTGGGTCTCGCCGTTCAAGGGCACCGCCATCCATGGAGTATTTGTTCTCGGCAGCGACCAGGTGGGTCTCCGCTCAAAACCTAGCACTCGTGTCT
GACCTCTTGCATCGGAAGGCTTCATACCTCGACCAATATCAGAGCGCGATCTCGTCGACGTTTGGCAGCTCAATCTCCGTCTTGACCACCATCAGCGGCGCTGCACGCCCCGGTGATCAG
GCCGGACACGAACGTCAGAGTTTTGTACCCCACTATGTTTGGTGTTCGGTCTGACCTTTGTTGGCTTCCAGATTTTGGATTCCTGGATGGTATCTCCCAACCCGCCATTGGAGGGTGGAC
GACCAACACCCTTCCTGGTCAGGCCATCGTGCCCAACGGCGTGATCCTAGCCCGCCGCCTCGGCGACACGGCAACGCGGCCCTCGTGGGCACTGGACGGCACCTTCATGGCGTTCCGCTG
GTTCCAGCAGCTCGTGCCCGAGTTCAACAAGTGGACGCTCGACAACGCCGTGCAGCCTCCGCCGTTGGCGGGCGTCACGCTCAACGCACAGGACGCGGCGGACTTCCTCGGCGCGCGCAT
GTTCGGGCGCTGGAAGAGCGGCGCGCCGCTCGACCTCGCGCCGACGGTGGACGACCCCGCCCTCGGCGCGGACCCGCAGCGGAACAACTTGTTCGATTATGGCGACGCACTGCTCGACGA
GACCAAGTGCCCGTTCAGCGCGCATATACGCAAGACGAACCCCCGTCTCGACTTGCCGCTCCTCTCGATCAACAACCATGCCATTCGCTCGAGCATCGCGTACGGACCTGAGGTGTCTGC
GTCGGAGTCCGCTTCGAATACGACTTCTCAAGACCGGGGCTTAATCTTCGGTGAGTGTTGGAGTACTGTCTTGTTTGAGAATGCACTCTAACCGCCATGCGTAGTCGAATATCAATCAGT
GATAGCCAACGGCTTCCGCTTCCAGCAGATTGCGTGGGCTAACACGGCCAAGTACGTCCTTTCCAGCACAGACACTGGCAAAAACGACTCAGAGTTGACGTGCACACAGCTTCCCGCCCG
CAAAGCTGGAGACACCTGGACTCGACGCCGTCATTGGGCAAGGCACCCCGCGTACGTCGGGCGGACTCGACCCGAACAATCAGACGAAGATGTTCACCGTGCCCCAGTTCGTCGTGCCCA
AGGGCGGGGAGTACTTCTTCGTCCCGTCCATCCCTGCGCTTACGAGCGAGTTCGCAACCTGA |
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGCGTCTTGTGCCTCTCCTCACCGCTGCACTATCATTCCTCCAGCCCCATCGAGATGTCCTCGGTGCAGCTGCTCCCGAGAACCACCTGACAGAGAGGCAGTCGTCTGGAAGGTCAACG
CCCTTGCTCGCTACGTTTCCTGGACAGGCTGTGCTGCCTACGCTCCAGGAGATTCTCACTCTGAATGCCACCAACGGGACCTTTCTCCCACTGCAGAATATTCAGGGTGATATCCTAGTT
GGCATGAAGAAGCAGACAGAAAGACTAGTGTTCTTCCAGATCAATAGCGCCAGTGGCTTCAGGAGCGCCCTCAAAACATACCTTCCCCAGATTACGTCTACTGCCACTCTCATCTCCCCT
GCTGCGAACCAGCCCCTTGCCTTCGTCAACATCGGGTTCTCTCAGACGGGGCTCACTGCCCTTGGGATTACAGACGACCTTAATGACGCAGAATTCGCCTCGGGAATGTGGGCCGACGCT
GCCAACCTCGGCGATGATCCCTCCAAGTGGGTCTCGCCGTTCAAGGGCACCGCCATCCATGGAGTATTTGTTCTCGGCAGCGACCAGGCTTCATACCTCGACCAATATCAGAGCGCGATC
TCGTCGACGTTTGGCAGCTCAATCTCCGTCTTGACCACCATCAGCGGCGCTGCACGCCCCGGTGATCAGGCCGGACACGAACATTTTGGATTCCTGGATGGTATCTCCCAACCCGCCATT
GGAGGGTGGACGACCAACACCCTTCCTGGTCAGGCCATCGTGCCCAACGGCGTGATCCTAGCCCGCCGCCTCGGCGACACGGCAACGCGGCCCTCGTGGGCACTGGACGGCACCTTCATG
GCGTTCCGCTGGTTCCAGCAGCTCGTGCCCGAGTTCAACAAGTGGACGCTCGACAACGCCGTGCAGCCTCCGCCGTTGGCGGGCGTCACGCTCAACGCACAGGACGCGGCGGACTTCCTC
GGCGCGCGCATGTTCGGGCGCTGGAAGAGCGGCGCGCCGCTCGACCTCGCGCCGACGGTGGACGACCCCGCCCTCGGCGCGGACCCGCAGCGGAACAACTTGTTCGATTATGGCGACGCA
CTGCTCGACGAGACCAAGTGCCCGTTCAGCGCGCATATACGCAAGACGAACCCCCGTCTCGACTTGCCGCTCCTCTCGATCAACAACCATGCCATTCGCTCGAGCATCGCGTACGGACCT
GAGGTGTCTGCGTCGGAGTCCGCTTCGAATACGACTTCTCAAGACCGGGGCTTAATCTTCGTCGAATATCAATCAGTGATAGCCAACGGCTTCCGCTTCCAGCAGATTGCGTGGGCTAAC
ACGGCCAACTTCCCGCCCGCAAAGCTGGAGACACCTGGACTCGACGCCGTCATTGGGCAAGGCACCCCGCGTACGTCGGGCGGACTCGACCCGAACAATCAGACGAAGATGTTCACCGTG
CCCCAGTTCGTCGTGCCCAAGGGCGGGGAGTACTTCTTCGTCCCGTCCATCCCTGCGCTTACGAGCGAGTTCGCAACCTGA |
Retrieve as FASTA
|
|
