Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
570 (666) |
| PWM (Da): |
63431.58 (72007.0) |
|
| PI (pH): |
6.27 (7.01) |
Peptide Signal: |
cut: 22 range:22-687 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MLANTWGQSGAMRNTVDGTPIVHIAEVEVQTSVTFKWYQSEVQKQSKNALIQAQSFANNISVTKTESPTEVVYTINVFDKAGKTIPDQVTIVTCTKVINNDPLGLSNVQGDVIPGLPKAL
EYFYYFQITDLARFKQTFTTFAYSRIVTSERLVNNPPPPAQTNPNDPFLGFNVAFTSIGIARFGLDPAAIGDPAFVRGQQADAKSLGDPGVQRGSAWSPDWDAEYKANIDGIFLITAYNE
TNAQNFIKELEAAFQWAPTRSSIRKVVVLHGFPRPGKEGINDHFGYRGGGMTNPQVKGVTFTDEKPMRFTGTPVIPIGVLVMGREGDDDKDMRPEWAVDGSLIATRKLNNLVPEFDTYLL
REGPKIFPGMDPQKAADKLGARLMGRWKNGTAVEMSPDNDAPEIAADDTRVNNFEFDQSDTQQRRCPFAAHMRKSNPRNDVPPSERLKHLIRRHNMPYGPEVSDDERQNGTTAERGLHLC
IYQSSIERGFRHIQTAWYNAPQFPPGKPTEPGWDPVFGQTGNDNEHRYMSGVDPANPQAKTTFLDKFVDPRGGEYFFSPSMKTLKDYICA* |
Retrieve as FASTA
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| Remarks |
complete sequence from genomic (7 introns). Incorrect prediction from JGI (3 extra exons are predicted in 5') |
DNA ►
Send to BLAST
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| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGCTCGCCAACACCTGGGGACAGAGCGGCGCGATGCGCAACACTGTGGATGGCACTCCGATCGTCCACATCGCCGAGGTCGAAGTACAGACGAGTGTTACCTTCAAGTGGTACCAGTCC
GAGGTTCAGAAACAGAGCAAGAACGCGCTTATTCAAGCTCAGTCTTTTGCCAACAATATCTCGGTGACCAAGAGGTTAGTCTTTCTTTGGCAGATTCGACGTAGACATTTGAGCTGATTG
TCCCGCAGACGGAATCTCCGACGGAGGTCGTGTACACCCCGTAAGCATCGCCTTTGATTGTCAAACATACAACCCTTACCGTCAAGCAGATCAATGTTTTCGACAAGGCTGGAAAGACCA
TTCCCGATCACAGTGAGTTGGTCATCTCGTCGTAGAACAGCCAGGATCTAACTGACAACTTCTCTAGAGTGACCATCGTAACATGCACCAAGGTTATCAACAACGATCCTCTCGGCCTCA
GCAACGTTCAAGGCGATGTCATATGTACGTCTATTATCTCATTGGAGATCGCTTTGCCTCATGCGCTGTGTCAGTCCCGGTCTGCCCAAGGCTCTCGAATACTTCTACTACTTCCAAATC
ACCGACCTCGCCCGGTTCAAGCAGACCTTCACCACATTCGCCTACTCACGCATCGTCACCTCCGAACGTCTCGTGAACAACCCTCCCCCTCCCGCGCAAACCAACCCGAACGACCCCTTC
CTCGGTTTCAACGTCGCATTCACCAGCATCGGCATCGCGCGCTTCGGCCTCGACCCCGCTGCGATCGGCGATCCCGCGTTCGTGCGCGGCCAGCAGGCGGATGCGAAGTCGCTCGGGGAC
CCTGGCGTGCAGCGCGGCTCGGCATGGTCGCCCGACTGGGACGCAGAGTACAAGGCGAACATCGACGGGATCTTCCTCATCACGGCGTACAACGAGACGAACGCGCAGAACTTCATCAAG
GAGCTCGAGGCCGCGTTCCAGTGGGCGCCGACGCGCTCGAGCATCCGCAAGGTCGTCGTCCTCCACGGCTTCCCGCGTCCCGGCAAGGAGGGCATCAACGACCACTTTGGCTACCGCGGC
GGAGGCATGACGAACCCCCAGGTCAAGGGCGTCACGTTCACTGACGAGAAGCCGATGCGCTTCACGGGCACGCCTGTCATCCCTATTGGCGTGCTGGTCATGGGCCGCGAGGGCGATGAC
GACAAGGACATGCGGCCTGAGTGGGCTGTCGATGGGAGTTTGATCGCGACGAGGAAGCTGAACAACCTCGTCCCCGAGTTTGACACGTACCTGCTGCGCGAGGGACCCAAGATCTTCCCC
GGAATGGACCCGCAGAAGGCAGCAGACAAGCTCGGCGCGCGTCTCATGGGTCGCTGGAAGAACGCGGTATGTCTTCTCTCTGGGCTCATGCCAATATGGTACTTACTCAGAAATACAGGC
ACTGCTGTCGAGATGTCCCCGGACAACGACGCGCCTGAGATCGCGGCGGACGACACGCGCGTGAACAACTTCGAGTTCGACCAGTCTGATACTCAGCAGCGCCGCTGCCCCTTCGCGGCG
CACATGCGCAAGTCGAATCCCCGCAATGACGTCCCGCCCTCCGAGCGGCTCAAGCACCTCTGTACGCCCGCTTCTCTTCTCCTCACGCCATTCACTCTGCTAACACGATATCTATTCTGT
AGCATCCGGAGGCACAACATGCCCTACGGCCCCGAGGTCAGCGACGACGAGCGGCAGAACGGCACGACCGCCGAACGTGGTCTTCATCTTTGTATCTACCAGAGCAGCATCGAGCGCGGT
TTCCGGCACATCCAGACTGTGGTGAGTCCCTCTGCTCAATACCCTCTCCCTTCACCATGCTAATTACTGCACGTCGCAGCGTGGTACAACGCGCCGCAGTTCCCGCCCGGCAAGCCGACA
GAGCCAGGCTGGGACCCCGTGTTCGGGCAGACGGGCAACGACAACGAGCACCGCTACATGAGCGGCGTGGACCCGGCGAACCCGCAGGCGAAGACGACGTTCCTGGACAAGTTCGTCGAC
CCGCGCGGCGGCGAGTACTTCTTCTCGCCGAGCATGAAGACGTTGAAGGACTACATCTGCGCGTAG |
Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGCTCGCCAACACCTGGGGACAGAGCGGCGCGATGCGCAACACTGTGGATGGCACTCCGATCGTCCACATCGCCGAGGTCGAAGTACAGACGAGTGTTACCTTCAAGTGGTACCAGTCC
GAGGTTCAGAAACAGAGCAAGAACGCGCTTATTCAAGCTCAGTCTTTTGCCAACAATATCTCGGTGACCAAGACGGAATCTCCGACGGAGGTCGTGTACACCATCAATGTTTTCGACAAG
GCTGGAAAGACCATTCCCGATCAAGTGACCATCGTAACATGCACCAAGGTTATCAACAACGATCCTCTCGGCCTCAGCAACGTTCAAGGCGATGTCATTCCCGGTCTGCCCAAGGCTCTC
GAATACTTCTACTACTTCCAAATCACCGACCTCGCCCGGTTCAAGCAGACCTTCACCACATTCGCCTACTCACGCATCGTCACCTCCGAACGTCTCGTGAACAACCCTCCCCCTCCCGCG
CAAACCAACCCGAACGACCCCTTCCTCGGTTTCAACGTCGCATTCACCAGCATCGGCATCGCGCGCTTCGGCCTCGACCCCGCTGCGATCGGCGATCCCGCGTTCGTGCGCGGCCAGCAG
GCGGATGCGAAGTCGCTCGGGGACCCTGGCGTGCAGCGCGGCTCGGCATGGTCGCCCGACTGGGACGCAGAGTACAAGGCGAACATCGACGGGATCTTCCTCATCACGGCGTACAACGAG
ACGAACGCGCAGAACTTCATCAAGGAGCTCGAGGCCGCGTTCCAGTGGGCGCCGACGCGCTCGAGCATCCGCAAGGTCGTCGTCCTCCACGGCTTCCCGCGTCCCGGCAAGGAGGGCATC
AACGACCACTTTGGCTACCGCGGCGGAGGCATGACGAACCCCCAGGTCAAGGGCGTCACGTTCACTGACGAGAAGCCGATGCGCTTCACGGGCACGCCTGTCATCCCTATTGGCGTGCTG
GTCATGGGCCGCGAGGGCGATGACGACAAGGACATGCGGCCTGAGTGGGCTGTCGATGGGAGTTTGATCGCGACGAGGAAGCTGAACAACCTCGTCCCCGAGTTTGACACGTACCTGCTG
CGCGAGGGACCCAAGATCTTCCCCGGAATGGACCCGCAGAAGGCAGCAGACAAGCTCGGCGCGCGTCTCATGGGTCGCTGGAAGAACGGCACTGCTGTCGAGATGTCCCCGGACAACGAC
GCGCCTGAGATCGCGGCGGACGACACGCGCGTGAACAACTTCGAGTTCGACCAGTCTGATACTCAGCAGCGCCGCTGCCCCTTCGCGGCGCACATGCGCAAGTCGAATCCCCGCAATGAC
GTCCCGCCCTCCGAGCGGCTCAAGCACCTCATCCGGAGGCACAACATGCCCTACGGCCCCGAGGTCAGCGACGACGAGCGGCAGAACGGCACGACCGCCGAACGTGGTCTTCATCTTTGT
ATCTACCAGAGCAGCATCGAGCGCGGTTTCCGGCACATCCAGACTGCGTGGTACAACGCGCCGCAGTTCCCGCCCGGCAAGCCGACAGAGCCAGGCTGGGACCCCGTGTTCGGGCAGACG
GGCAACGACAACGAGCACCGCTACATGAGCGGCGTGGACCCGGCGAACCCGCAGGCGAAGACGACGTTCCTGGACAAGTTCGTCGACCCGCGCGGCGGCGAGTACTTCTTCTCGCCGAGC
ATGAAGACGTTGAAGGACTACATCTGCGCGTAG |
Retrieve as FASTA
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