RedOxiBase: View Perox 10235

Entry information : EcamAPx-R (EcC049908.20)

Entry ID	10235
Creation	2012-01-30 (Qiang Li)
Last sequence changes	2012-02-02 (Qiang Li)
Sequence status	complete
Reviewer	Qiang Li
Last annotation changes	2013-10-30 (Qiang Li)

Peroxidase information: EcamAPx-R (EcC049908.20)

Name (synonym)

EcamAPx-R (EcC049908.20)

Class

Ascorbate peroxidase related [Orthogroup: APx-R001]

Taxonomy

Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus

Organism

Eucalyptus camaldulensis [TaxId: 34316 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	EcamAPx-R start..stop	S start..stop
EglAPx-R	664	0	1..341	1..342
EguAPx-R	659	0	1..341	1..342
EgrAPx-R	650	0	1..341	1..342
CsAPx-R	455	3e-162	7..341	2..335

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	1..229	229	N° 2	311..392	82	N° 3	1047..1174	128	N° 4	1702..1772	71
N° 5	1955..1997	43	N° 6	2074..2170	97	N° 7	2341..2424	84	N° 8	2934..3055	122
N° 9	3416..3482	67	N° 10	3930..4029	100
join(1..229,311..392,1047..1174,1702..1772,1955..1997,2074..2170,2341..2424,2934 ..3055,3416..3482,3930..4029)

Literature and cross-references EcamAPx-R (EcC049908.20)

Protein sequence: EcamAPx-R (EcC049908.20)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	341
PWM (Da):	36372.36
PI (pH):	7.46

Sequence 577
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MASPSPSTTHLSPLTCCSSSSLSSHPSSRRTKFEFPANSQRSSPSPIASRAGAIVSPSSSTPGAASSGDHAPVRGRSVAGLAATLPFLLQLRGYTEGIVADAAELDNDEYTMIKEEVRKVVSKMKAAGVLRLVFHDAGTFEMGENGGMNGSIVYELERPENAGLKKPVKILEKAKGEVDAKRVSWADMIAVAGAEAVSVCGGPTIPVVLGRLDSMKPDPEGRLPEETLDALGLKQCFQRKGLSTQELVALSGAHTLGSKGFGNPVVFDNSYYKVLLEKPWMSAGMPSMIGLPSDRALVEDNECLRWIEKYANDQNLFFKDFENAYVKLVNSGARWRS

Retrieve as FASTA

Remarks

Complete sequence from genomic. Correct prediction from kazusa.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCTTCACCGTCGCCGTCGACGACCCACCTCTCCCCACTCACCTGCTGCTCCTCCTCCTCCCTTTCCTCCCATCCCTCTTCTCGCAGGACGAAATTCGAATTCCCCGCCAATTCCCAA
CGGTCTTCTCCCTCCCCCATCGCCTCTCGCGCCGGAGCCATCGTCTCTCCCTCAAGCTCGACCCCCGGCGCCGCTTCTTCCGGTGACCACGCCCCCGTGCGCGGTCGATGTTTCGCGAAT
CTGGTCGATCGCGATCTTTCGGAGCTCGCAGCTGGAGACCGCGTCTCGAGGAGGAGGAGGAAGCTCATAGCCGTGGCGGGCCTGGCGGCCACATTGCCGTTTCTCCTTCAGCTGCGCGGT
TACACGGAGGGAATCGTCGCCGACGCCGCCGAGTAAGCTCGACGCTCTTTGCTTGACGAAAGTCCATGTCTTTATTGGTTGGACCGAATGAAACGGGAATTTCGAGGGAGATTGAGATGC
TTTTGAGCTTTGGAGTTGAGCCTGCGGAGCGAAAGAAGGCTTTCCGTTTTCGTCGGTGGTCGGATTATGGGTTTTGCAGCTGCTTCTTCCGGTGATCAGTTTGTGTGTATGTGTGCATGC
TACGGAGTTGTCCCGCCGAAATGACGCTTTTTGCTTCCTTTAAAGGACTTACTTGCCGTTTAAAGTAGAAGGTCCAGGTGTGGTCCTTCGGATTATGAGATTTTAGTTTGTGTTTCCGGC
TGGCATTTGAGGGGTAAAAACGTATCCTGGGATGGGTTTCCTGGTTGCTCATTCACTGACTTCCTGGATTTTAGTATCTGTAAGCTGTAACTGTGAATTGTCTTGTTTCTCAACATTGAT
GTTATGGACACCGTATTCAGCTGGGGAAAAACCATTTTGGGTGATGGTTTGATGGGTCGAAATTGCGATTCGGAAGTACTAATTGGATAGGGCTGTGAGTTTGATATGTTGTTTATCGTG
ACCTTGGGGCTGCATCTGTATTTGTGTTGACTTGGGGCATTTGGATATGTCCATGACTGTTGGTTTTTCATGTTCGTATATCAAAGATTAGATAATGATGAATACACGATGATAAAGGAA
GAGGTCAGAAAGGTAGTTTCCAAAATGAAGGCTGCTGGTGTGCTTCGTTTGGTATTTCATGATGCTGGAACCTTTGAAATGGGTGAAAACTCAGGTATTTTACATGGACAGAAAGTTAAA
GTTCTACAAATAATGATACTCGACATCAGTAACTGTGCTCCATATCTCTGGCTACAATTTTTGAATGCCTACTAATCTATCCAAATTGTTTTATCCTCTTTTCCCCATAATTGAACTTTT
GAGCTGAAGCTAAGATGATGCATATATTGATTTCATCTGAATTAGGGGGATATAGCTCTCATTTGCCAAAAAAGTTAGATAATCCCTGTAAATGGGCATAACTTTTTTTGTCATGGTGGT
TTACTAAATGAACAAGGGCAATTAATTCTATGACTGTTAAAGCAACTACAGACTCTAATGGACCTTTATAAATGAATGATCAATCATAGAGAGCAGTATCATTCATACTACCTGTATTTG
TGAACTAATGGTCATGTCCGATTCTTTTATTGCATGCACATACTTCTTTTGAGTTGAAAATTTTCTGCGTCATGCTTTTTTGTCTGAGTATGGATTTCAATCCTCATATTGTAATTCTAA
TATGTTTGTGTCAATATCCAGGTGGTATGAATGGTTCCATAGTTTATGAACTTGAAAGGCCTGAAAATGCTGGGCTAAAAAAGCCTGTGAAGGTATGTTTTCTTTTATTACATCCTCAAG
CTTAGCATCCATTCTGGAGATGCAACATTTCATTTCAACTAGTGTACTCCCTCATGCATTTCTGGACTGCTAGAAGTTCCTGTATCTTATGTCTAGAATAGTCAACTCCGGTTCATCTTC
AGGCTAACTCGTCAGTCATTGTGTTGTTGTTTAGATACTAGAGAAAGCAAAGGGTGAGGTGGATGCAAAGAGACCAGGTGATTTTTTTTAGTGTTATATTCTATATGCTGATGGTATGAT
TGTGGTGATATAGATGGAACTTTCCTCTCTCAGTATCCTGGGCAGACATGATAGCTGTGGCTGGAGCTGAAGCAGTTTCTGTTTGTGGAGGTCCAACTATTCCAGTTGTTCTGGGCAGAC
TTGACTCAATGTAAGAAGCTATTTCCAATTCAATTACTACTGTTCTGAAGATGCGTTGATGGCAGACAAAACGTTATTTCACTCATTTCGTATTGTCAGTATTGCAAGATTCTTTGCATG
TCTCCATCTTTGTGCATAGTCCCAAGCTAATATTGGTTTGGTTTCATTTCTTTATTGAAGGAAGCCTGATCCTGAAGGAAGACTTCCCGAAGAAACTCTTGATGCTTTGGGTTTAAAGCA
GTGTTTTCAGAGGAAGGGCTTATCGTGAGTTGCTATCCCATGTACATGTTGAATGATGCTTGCAAATTAAATGAAGTATTGTTTATTGGCTATTGCATATTGTTATGCATCTTACTGCTG
ATGGTTAAACTGTTTAATAGATATTTCGCCGGTCAACATAGAATTGGTTGTTTAGTCAACTGTGATACATTATGTTTTGCAATTTCGGGATGATAGATTCAGAGAAAATAACAACCCCCA
AAAAAGCAAGACAGCTATGCTTCCTTCTGTGGCAATAAGCATTCCTTCTTTGTTTTTCCCCTCCATTCCAAAAAAATTATGCCCTCTCTATGAGTTATTATTCTGACAGTATTAGCTGCA
TGATTACAAAAATGAAGCTTTCAAAACAGACTAAGAACATGTTTGATTGTTCCTGCTATGGACTCTGTTTGATTTTTTTTGCTATAGAAATCTGTCCTTTCAGTTTCTTACACTATTCTG
TAGTTTCTTCTCTCAGCAAAAGGAACATATTGATGTTGTCCTCATCCTCTCAGGACACAGGAACTTGTTGCATTATCTGGAGCCCATACCCTCGGCAGTAAAGGTTTTGGGAATCCGGTT
GTTTTTGACAATTCATACTACAAGGTTCTTCTAGAGAAACCCTGGATGTCTTCAGGTAGCGAAAAAACATTGATGGTTCTCATGTTCTTCTGTTAGACTTTTTGCCGGACGTAGTTACGT
TGGCCTACTGGTTCTAGTTTGTTGTAGGTAAAGCATTATTTGGCATGAAATTAGTCCTGCCATCAGCTTTCTAACCCAGGAAAAGATTCTATATCTGATACTATGGAGTCATAATTGTGG
TATTGTTTCAATAGTTAGCTCTGATCCAGTGGAAATTTATTTAGTCTGTACTGGGAAAAGGTTATTCTCACTTTTTCTGTTGCAAAAGCGACCTGAGTTTTTCTCATCGGTAATAGTTCT
CACTTAAGCTTTGCTCTTAATTATCCCTTGCTTAATTTCCTTTTTCTCAATGCAGCTGGTATGCCAAGTATGATTGGACTTCCTTCTGATCGTGCACTTGTTGAGGACAATGAATGCTTA
AGGTTACTGATTTGATATCCCTACTATTTCCTTTTTACTAGGAAGATGGGAACAGTTTAGCCATATCTTTCTGGCCATAGACTATTATGGTGAGATATATATATATCGCTGTCACTGGCA
CTTGTCAACTTTCAGGGATGCACCATTATTGCCACTTTTGATTTTCTTTTTCTCATGATTCTGGATAAAAGTTGCCTTTTGTCTTAATGATCCAGTTAAATCCACATTCCATAAATATGG
GAGCTGCTATATTATCATGGCCTGTTTATGCTTCTGAGAAAGCTATGTAGAATGGAAATGTGCCGACACAACAAACATAAGTAGCCAGTCTGAAGTAATTAGTATCACCTGATTTACTAT
GGATATTTTGCATGAGAATGTTCTGTTTAATGTGATATTTGTTTCTTTTATTTGCTCGATCATGATACCTATATATTTTATATATACAGATGGATTGAGAAATATGCAAATGATCAGAAT
TTGTTCTTCAAAGATTTTGAGAATGCTTATGTCAAGTTAGTGAATTCTGGTGCAAGGTGGAGGAGCTTG

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA