Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
282 (256) |
PWM (Da): |
30870.8 (28146.3) |
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PI (pH):
| 9.07 (8.66) |
Peptide Signal:
| cut: 27 range:27-282 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MAILTPKPRS CVMIALLLAM VSVSKAVLDA HYYDRTCPQA EKIILQTVQN ATRHDPKVPA RLLRMFFHDC FIRGCDASLL LDSTPGNKAE KDGPPNISVR AFYVIDDAKA KLEMACPHTV
SCADIVAVAA REIxTNAGGP YWNVPKGRKD GRVSNASETV NLLAPTFNVT QLLQRFAKRG LGLKDLVALS GGHTLGFSHC SSFEARLRDF SLIHDVDPTL NRAFAQQLKN KCPKPNGDRN
AGQFLDATSL TFDNVYYRRL VAGEGVFGSD QALYSDYRTR WM
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Retrieve as FASTA
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Remarks |
Partial sequence from genomic (introns 1 and 2). Incorrect prediction from kazusa, 3' end is missing. Joined with EcC043921.10 (5' end is missing due to NNNN in DNA) and EcS776599.10 (Two ends are missing due to short contig). Close to EcS596339.10 (Removed). No EST. |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTATTC TTACGCCGAA GCCTCGCTCT TGCGTGATGA TCGCCCTTCT ACTGGCGATG GTTTCAGTAT CGAAAGCGGT ACTTGATGCC CATTACTATG ACCGGACATG TCCGCAAGCT
GAGAAAATCA TATTGCAGAC GGTCCAAAAT GCCACGAGGC ACGACCCCAA AGTCCCCGCT CGCCTCCTTA GGATGTTCTT CCATGACTGT TTCATTCGGG TATGGACATC TGCAAACTTA
TCTGCAAAAT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CACTCATGCG TGTCGTTGGA TGGTGCATGC ACACAGGGAT GCGATGCATC GTTGTTGCTC GACTCTACTC
CTGGAAACAA AGCAGAGAAA GATGGTCCTC CTAATATCTC AGTTCGAGCA TTCTATGTGA TCGATGATGC CAAAGCAAAG CTTGAAATGG CATGTCCACA TACAGTCTCT TGTGCTGATA
TCGTTGCCGT CGCAGCTAGA GAAATTnnnA CTAACGCCTC GAGATAGCTA TTGTGGCATA ATATTGTCTA TTGCTTTCAT TGTTAAGGCT GGAGGGCCAT ATTGGAACGT GCCAAAAGGC
AGAAAAGATG GAAGAGTATC AAATGCTTCA GAAACGGTCA ACTTGCTAGC ACCAACATTC AACGTGACCC AACTCCTTCA ACGCTTTGCC AAAAGAGGCT TAGGCCTCAA GGACTTGGTT
GCACTATCTG GTGGTCACAC TCTTGGCTTC TCTCACTGTT CCTCTTTTGA AGCCCGGCTT CGTGACTTCA GTCTGATTCA TGATGTTGAT CCGACCTTGA ACCGTGCCTT TGCACAACAG
CTGAAGAATA AATGCCCTAA GCCAAACGGG GATCGAAATG CAGGACAGTT TCTGGATGCC ACATCGCTAA CCTTCGACAA CGTTTACTAC AGAAGACTCG TGGCnGGTGA AGGTGTGTTT
GGGTCAGATC AAGCACTGTA CAGTGATTAC AGGACAAGGT GGATG
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTATTC TTACGCCGAA GCCTCGCTCT TGCGTGATGA TCGCCCTTCT ACTGGCGATG GTTTCAGTAT CGAAAGCGGT ACTTGATGCC CATTACTATG ACCGGACATG TCCGCAAGCT
GAGAAAATCA TATTGCAGAC GGTCCAAAAT GCCACGAGGC ACGACCCCAA AGTCCCCGCT CGCCTCCTTA GGATGTTCTT CCATGACTGT TTCATTCGGG GATGCGATGC ATCGTTGTTG
CTCGACTCTA CTCCTGGAAA CAAAGCAGAG AAAGATGGTC CTCCTAATAT CTCAGTTCGA GCATTCTATG TGATCGATGA TGCCAAAGCA AAGCTTGAAA TGGCATGTCC ACATACAGTC
TCTTGTGCTG ATATCGTTGC CGTCGCAGCT AGAGAAATTn nnACTAACGC TGGAGGGCCA TATTGGAACG TGCCAAAAGG CAGAAAAGAT GGAAGAGTAT CAAATGCTTC AGAAACGGTC
AACTTGCTAG CACCAACATT CAACGTGACC CAACTCCTTC AACGCTTTGC CAAAAGAGGC TTAGGCCTCA AGGACTTGGT TGCACTATCT GGTGGTCACA CTCTTGGCTT CTCTCACTGT
TCCTCTTTTG AAGCCCGGCT TCGTGACTTC AGTCTGATTC ATGATGTTGA TCCGACCTTG AACCGTGCCT TTGCACAACA GCTGAAGAAT AAATGCCCTA AGCCAAACGG GGATCGAAAT
GCAGGACAGT TTCTGGATGC CACATCGCTA ACCTTCGACA ACGTTTACTA CAGAAGACTC GTGGCnGGTG AAGGTGTGTT TGGGTCAGAT CAAGCACTGT ACAGTGATTA CAGGACAAGG
TGGATG
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Retrieve as FASTA
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