View Redoxidase 1030

Entry information : OsPrx20(LOC_Os01g73170)

Entry ID	1030
Creation	2006-07-17 (Filippo Passardi)
Last sequence changes	2006-07-17 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2022-02-10 (Christophe Dunand)

Peroxidase information: OsPrx20(LOC_Os01g73170)

Name

OsPrx20(LOC_Os01g73170)

Class

Class III peroxidase [Orthogroup: Prx005]

Taxonomy

Viridiplantae (green plants); Streptophyta; Angiospermae; Monocotyledons

Organism

Oryza sativa ssp japonica cv Nipponbare [TaxId: 39947 ]

Cellular localisation

N/D

Tissue types

Coleoptiles
Leaves
Radicles
Roots
Seeds
Shoots

Inducers

Drought
Fungus infection

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	OsPrx20 start..stop	S start..stop
ZmPrx16	498	5.04e-178	46..377	31..361
SiPrx06	476	2.67e-169	52..377	37..357
BdiPrx120	471	2.23e-167	47..377	33..361
TaPrx23-2D	469	1.13e-166	47..377	33..358

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '1030' 'join(42421944..42422435,42424085..42424726)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	42421944..42422435	490	N° 2	42424085..42424726	640
join(42421944..42422435,42424085..42424726)

Literature and cross-references OsPrx20(LOC_Os01g73170)

Literature	Passardi F., Longet, D., Penel C. and Dunand, C. The class III peroxidase multigenic family in rice and its evolution in land plants Phytochemistry, 65 (13), 1879-1893 (2004)
Protein ref.	UniProtKB: Q5U1S3
DNA ref.	GenBank: NC_008394.1 (42421980..42424723)

Protein sequence: OsPrx20(LOC_Os01g73170)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	377 (340)
PWM (Da):	39500.28 (36071.5)	Transmb domain:	i13-35o
PI (pH):	7.71 (7.12)	Peptide Signal:	cut: 38 range:38-377

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MASRRSAAASPAMAAAAAVVAVSVYLLVCSAPAAATAAAVAKKPS
YPPVAKGLSFDHYKKSCPQAEAIVFSFLRDAIGKDVGLAAALIRLHFHDCFVQGCDASILLTKTPGGPDGEQQAI
PNESLRPAAFKAVNDIRALLDRACGRVVSCSDIVTLAARDS
VKLAGGPSYKVPLGRRDGLTSATPSQVLGALPPPTSHVPELIAALAKLNLDAADLIALSGAHTVGIAHCTSFTGRLYPK
QDGTMDKWFAGQLKLTCPKNDTANTTVNDIRTPNAFDNKYYVDLQNRQGLFTSDQDLFVNATTRPLVAEFAVDQSAFFHQFVFSVVKMGQIQVLTGSQGQIRANCSVRNPGAASADEELP
WSAAVETVVEAAESIVL*

Retrieve as FASTA

Remarks

chromosome 1. 39 ESTs (ubiquitous).

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCTTCTCGTAGAAGTGCAGCAGCTAGTCCGGCCATGGCAGCAGCAGCTGCGGTAGTAGCTGTATCTGTATACTTGCTGGTGTGCAGTGCTCCGGCGGCGGCGACGGCGGCGGCGGTG
GCGAAGAAGCCGTCGTACCCGCCGGTGGCGAAGGGGCTATCGTTCGACCACTACAAGAAGAGTTGCCCGCAGGCGGAGGCCATCGTGTTCAGCTTCCTGCGCGACGCCATCGGCAAGGAC
GTCGGCCTCGCCGCGGCGCTGATCCGGCTCCACTTCCACGACTGCTTCGTCCAGGGCTGCGACGCCTCCATCCTCCTCACCAAGACGCCCGGCGGGCCCGACGGCGAGCAGCAGGCGATA
CCCAACGAGTCGCTGCGGCCGGCGGCGTTCAAGGCCGTCAACGACATCCGCGCCCTGCTCGACAGGGCGTGCGGCCGCGTCGTCTCCTGCTCCGACATCGTCACCCTCGCCGCCCGCGAT
TCCGTCAAACTGTGGTAACTAACTAAGTTAATTGATTAATTAATATTTTTTTCACTTACTTACTGCCACTGGAAAAGTTTTTCATGGAAGAGGAGATGGATTAAACACTACTGCTATCTA
AAAAGTGGAGTTCATGAATAGAGGATAGGAAAATTAACTTAAGTAATGTGGGTTAGGATTCAAAATTTCCGAATGAAATTTTGGTCATATTAGACCATCCGATACCATACTATTTTAGCT
AAATTTTTAATTTTTAATTTTTTTCATGAATTTTGGTAATATTTATTTAAATTTGAATAACATATTTTTAAAATTTCAAAAAATTTGAACCGAAATTTCGAAAATATCATCATATCGGCA
CCCGATACAGATACCGGAAACAAAAAGTCTGAACCCTGATGTGGGCACTGGCGCACTGCACGATGCTGCCGATGCACGAACTGTGTTTCATCCATCCATGATCCATGCATCTTGTTTCTC
CAATTTTCTAGTATATCTCGATCTGGCAGCGGACAAGAGACTTTCGTTGTCCGGTCCTAAATTAATCAACAGAAATGACCAAAGAACATCTTACAATATAATGATCATCCCTTTAAAATT
CTCTTAATTAATTAAATACCCAACAATTAATTATGCACGCATCGAAAAACAAAGGGAAAAGAATCTACGCAGAGTTCTGCATGTTAGAAAAGACAATTCCCTTTAAGCTAGCCTTCTTTA
GAGTGAAAGATATTTGGAGATCAATTTGCACGTAAATTAATCTAATTAATTAAGCCATGTAACTGAGTAACAATTCCCTTGAAGAGCCATAGGAAACTATAACGCGGGATAATTGGACTG
TCACGATCAGTACTTCTGTAGAATTTATTGGCTTGCGAGAAATGGCACAAGAAGAACAAGATAGAGATGAAGGAAACAGGAAATTGTGTTGCTGTCTCAACCACGTGTGGAATCACTGTA
TCATGCCCAATGGCCAAAATTATCAGAACATCGACATCTTAAATAATTAGGACGACTAATACGTGTAACAGATATTAATAAGACCATTTGCTGACTAGGAGTGTACCATCGATGTTCATT
AACTAATTAATTATTTATTAATCAATTAGTCATTACATATCATTTACTTGCTCTGTTCACGAATATAAACATTTTTAAGGAGTCAAAGCATGGATTAAGATTTAGATGAAATTGTTTTGA
TGACTAGAAATTTTACTAATAATGTTAAAAATACGTTTTCTAAAAAAAATAATGAGATTAAAGATATGATATGGTCCCCATATCTTTGGACTTTGAGTATGTATTAGACTGTTATTAGCG
TGGTGTTGTGTATGTTTGGTTTGTGCATGGTTACGGATGTGCCCGTGTAAATCAATAAATCTTAAAGGAGTAGTTGGACTGGAAAAGTGGTACGGAGTATTACATAAATGTTTGTTCTGG
ACAAATTTAATTAAACGTTAGAAATGTTTACGTCTGTGCAAAGATAAATATTAATCAGTGAATGTTAGAACATACTCCCTCCGTTTCATAATGTAAGTCATTCTTTGATGCCCAATTCTT
TGATGTAACCCCTACTCTATCAATATACAAGCAAAGCTTTTACCCTCTTTTCAAGAAAAATAAATATAAAAACCAAAATGTTGAACATTGCAATTGGGTGCAGGCCGGTGGGCCGTCGTA
CAAGGTGCCGCTCGGCCGCCGTGACGGCCTCACATCGGCGACGCCGTCACAGGTGCTGGGCGCGCTCCCGCCGCCGACCTCCCACGTCCCCGAGCTCATCGCCGCGCTGGCCAAGCTCAA
CCTCGACGCCGCCGACCTCATCGCGCTCTCCGGCGCCCACACCGTCGGCATCGCCCACTGCACCTCCTTCACCGGGCGGCTGTACCCGAAGCAGGACGGCACCATGGACAAGTGGTTCGC
CGGCCAGCTCAAGCTGACGTGCCCGAAGAACGACACGGCCAACACCACCGTCAACGACATCCGGACGCCCAACGCCTTCGACAACAAGTACTACGTCGACCTGCAAAACCGCCAGGGCCT
CTTCACCTCCGACCAGGACCTCTTCGTCAACGCCACCACCAGGCCGCTCGTCGCCGAGTTCGCCGTCGACCAGTCGGCGTTCTTCCACCAGTTCGTCTTCTCCGTCGTCAAGATGGGCCA
GATCCAGGTGCTCACCGGCTCGCAGGGACAGATCCGGGCAAACTGCTCCGTCCGCAACCCCGGCGCCGCCTCCGCCGACGAGGAGCTCCCGTGGTCCGCCGCCGTGGAGACCGTCGTCGA
GGCGGCCGAGAGCATCGTGCTCTAG

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA