Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
333 (310) |
PWM (Da): |
35959.46 (33622.2) |
Transmb domain: |
i7-24o |
PI (pH):
| 9.89 (9.78) |
Peptide Signal:
| cut: 24 range:24-333 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MASITAAFRA LAVVLFVSVF ATAAQSPKSS LKVGFYRRTC PSTEAIVRKT VFEAVSRNPG MAAGLIRMHF HDCFVRGCDA SVLLKSTAGN PAERDHPANN PSLRGFEIID QAKAQLEALC
PRTVSCADIV AFAARDSAYK ARGIYYDVAA GRRDGRISRL PEVTQNLPPP SFNAQQLIAN FARKGLSADE MVTLSGAHSI GISHCSSFSS RLYTFNATLA QDPSLDPAYA AFLKRKCPPP
SNMTQADPTV PLDSITANTL DNKYYLQLLK LRGLLTSDET LYTSPSTSRM VVNNAKNNFA WSVKFAKAMV KMGSIDVLTG KQGEIRKLCS IVN
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Retrieve as FASTA
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Remarks |
Completre sequence from 5 ESTs and genomic (partial). Incorrect prediction from kazusa (3' end is missing due to NNNNNNN in DNA). |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTCCA TCACAGCAGC ATTTCGTGCA CTCGCGGTGG TTCTCTTCGT CTCGGTTTTT GCAACAGCAG CTCAAAGTCC GAAATCGTCC CTAAAGGTGG GATTCTACCG ACGTACTTGC
CCGTCGACAG AAGCTATTGT CAGGAAAACC GTGTTTGAGG CCGTCTCTAG GAACCCCGGG ATGGCAGCTG GTCTCATTCG CATGCATTTT CATGATTGCT TCGTTAGGGG CTGTGATGCT
TCAGTGCTCT TGAAATCAAC CGCAGGAAAC CCGGCGGAAA GAGATCACCC CGCGAACAAC CCGAGCCTAC GAGGGTTTGA AATCATCGAT CAGGCCAAGG CCCAGCTCGA AGCCTTGTGC
CCCAGGACCG TCTCATGTGC CGATATAGTT GCTTTTGCCG CCCGTGACAG TGCCTACAAG GCTAGGGGCA TATACTACGA TGTCGCTGCT
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTCCA TCACAGCAGC ATTTCGTGCA CTCGCGGTGG TTCTCTTCGT CTCGGTTTTT GCAACAGCAG CTCAAAGTCC GAAATCGTCC CTAAAGGTGG GATTCTACCG ACGTACTTGC
CCGTCGACAG AAGCTATTGT CAGGAAAACC GTGTTTGAGG CCGTCTCTAG GAACCCCGGG ATGGCAGCTG GTCTCATTCG CATGCATTTT CATGATTGCT TCGTTAGGGG CTGTGATGCT
TCAGTGCTCT TGAAATCAAC CGCAGGAAAC CCGGCGGAAA GAGATCACCC CGCGAACAAC CCGAGCCTAC GAGGGTTTGA AATCATCGAT CAGGCCAAGG CCCAGCTCGA AGCCTTGTGC
CCCAGGACCG TCTCATGTGC CGATATAGTT GCTTTTGCCG CCCGTGACAG TGCCTACAAG GCTAGGGGCA TATACTACGA TGTCGCTGCT GGCCGCCGCG ACGGCCGCAT CTCTCGCCTC
CCGGAAGTTA CACAGAACCT CCCGCCGCCA AGCTTCAACG CCCAACAGCT CATTGCCAAC TTCGCTAGGA AAGGGCTTTC GGCGGATGAG ATGGTGACCC TGTCAGGAGC ACACTCGATT
GGAATCTCCC ACTGCTCTTC CTTCTCAAGC CGCCTCTACA CGTTCAACGC CACACTCGCC CAAGATCCTT CCTTGGACCC TGCGTACGCT GCATTCTTGA AGAGAAAGTG CCCACCACCG
AGCAATATGA CGCAAGCAGA CCCGACCGTG CCACTTGATA GCATCACAGC AAACACTTTG GACAACAAGT ACTACCTCCA GTTGCTGAAG CTCCGTGGCT TGTTGACTTC TGACGAGACG
CTGTACACGA GTCCCTCGAC TTCAAGGATG GTCGTGAACA ATGCGAAGAA CAACTTCGCT TGGAGCGTGA AGTTCGCCAA GGCAATGGTG AAGATGGGCT CGATCGACGT ACTCACTGGT
AAACAAGGAG AGATCAGGAA GCTGTGCAGT ATTGTAAATT GA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GCTCCATCAA AAACATCCCC CAATTCAAGC CTCTCAACAT GGCTTCCATC ACAGCAGCAT TTCGTGCACT CGCGGTGGTT CTCTTCGTCT CGGTTTTTGC AACAGCAGCT CAAAGTCCGA
AATCGTCCCT AAAGGTGGGA TTCTACCGAC GTACTTGCCC GTCGACAGAA GCTATTGTCA GGAAAACCGT GTTTGAGGCC GTCTCTAGGA ACCCCGGGAT GGCAGCTGGT CTCATTCGCA
TGCATTTTCA TGATTGCTTC GTTAGGGGCT GTGATGCTTC AGTGCTCTTG AAATCAACCG CAGGAAACCC GGCGGAAAGA GATCACCCCG CGAACAACCC GAGCCTACGA GGGTTTGAAA
TCATCGATCA GGCCAAGGCC CAGCTCGAAG CCTTGTGCCC CAGGACCGTC TCATGTGCCG ATATAGTTGC TTTTGCCGCC CGTGACAGTG CCTACAAGGC TAGGGGCATA TACTACGATG
TCGCTGCTGG CCGCCGCGAC GGCCGCATCT CTCGCCTCCC GGAAGTTACA CAGAACCTCC CGCCGCCAAG CTTCAACGCC CAACAGCTCA TTGCCAACTT CGCTAGGAAA GGGCTTTCGG
CGGATGAGAT GGTGACCCTG TCAGGAGCAC ACTCGATTGG AATCTCCCAC TGCTCTTCCT TCTCAAGCCG CCTCTACACG TTCAACGCCA CACTCGCCCA AGATCCTTCC TTGGACCCTG
CGTACGCTGC ATTCTTGAAG AGAAAGTGCC CACCACCGAG CAATATGACG CAAGCAGACC CGACCGTGCC ACTTGATAGC ATCACAGCAA ACACTTTGGA CAACAAGTAC TACCTCCAGT
TGCTGAAGCT CCGTGGCTTG TTGACTTCTG ACGAGACGCT GTACACGAGT CCCTCGACTT CAAGGATGGT CGTGAACAAT GCGAAGAACA ACTTCGCTTG GAGCGTGAAG TTCGCCAAGG
CAATGGTGAA GATGGGCTCG ATCGACGTAC TCACTGGTAA ACAAGGAGAG ATCAGGAAGC TGTGCAGTAT TGTAAATTGA GGACGTGCCG GAGAGTTACA ACTTTTGCAG GACGGAGATT
GGGAACATGA TCTATATCGT CCTTTATATT TATTCTTTGC TTGACTTTAT TTGTTTCGAC GTGTCCGGTT CGATTGTTGC GTCGTCTTTC AGATGTAAGA CTTTCCTATT TGGCAAAAAG
CTGATTGAAA TGTTATTTAT TTTTTTGT
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Retrieve as FASTA
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