Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
356 (330) |
PWM (Da): |
37910.05 (35519.8) |
Transmb domain: |
i7-29o |
PI (pH):
| 4.82 (4.73) |
Peptide Signal:
| cut: 27 range:27-356 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MASRTSATAG MLLLAAAAAL VCSSAAARMP PLAKGLSLGY YDASCPQAEA VVFEFLQDAI AKDVGLAAAL IRLHFHDCFV QGCDASILLD STPTEKSEKL APPNKTLRKS AFDAIDDLRD
LLDRECGDTV VSCSDIVTLA ARDSVLLAGG PWYDVPLGRH DGSSFASEDA VLSALPSPDS NVTTLLEALG KLKLDAHDLV ALSGAHTVGI AHCTSFDKRL FPQVDPTMDK WFAGHLKVTC
PVLNTNDTTV NDIRTPNTFD NKYYVDLQNR QGLFTSDQGL FFNATTKPIV TKFAVDQSAF FDQYVYSVVK MGMIEVLTGS QGQIRKRCSV SNAAAAGDRA WSVVETVAEA AESLVL
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Retrieve as FASTA
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Remarks |
chromosome 1. 12 ESTs.
Rice blast fungus interaction
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DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCGTCCA GGACTAGTGC TACTGCCGGC ATGCTGCTGC TCGCCGCCGC GGCTGCGCTG GTGTGCAGCT CGGCGGCGGC GAGGATGCCG CCGTTGGCGA AGGGGTTGTC GTTGGGCTAC
TACGACGCGA GTTGCCCGCA GGCGGAGGCC GTCGTGTTCG AGTTCCTGCA GGACGCCATC GCCAAGGACG TCGGCCTCGC CGCGGCGCTG ATCCGGCTCC ACTTCCACGA CTGCTTCGTC
CAGGGCTGCG ACGCCTCCAT CCTGCTCGAC AGCACACCCA CCGAGAAGAG CGAGAAGTTG GCGCCGCCGA ACAAGACCCT CCGCAAGTCG GCGTTCGACG CCATCGACGA TCTCCGCGAC
CTGCTCGACA GGGAATGCGG CGACACCGTC GTGTCCTGCT CCGACATCGT CACCCTCGCC GCCCGCGACT CCGTCCTCCT CGCCGGTGGC CCGTGGTACG ATGTTCCCCT CGGCCGCCAC
GACGGCTCCA GTTTCGCGTC TGAGGACGCC GTCCTGAGCG CGCTCCCGTC GCCGGACTCC AACGTCACCA CGCTCCTCGA AGCGCTGGGC AAGCTCAAGC TCGACGCCCA CGACCTCGTC
GCCCTCTCCG GCGCGCACAC CGTCGGCATC GCGCACTGCA CTTCCTTCGA CAAGCGCCTC TTCCCTCAAG TCGACCCCAC CATGGACAAG TGGTTCGCCG GCCACCTCAA GGTCACCTGC
CCGGTGCTGA ACACCAACGA CACCACCGTC AACGACATCC GGACGCCCAA CACCTTCGAC AACAAGTACT ACGTCGACCT GCAAAACCGC CAGGGCCTCT TCACCTCCGA CCAGGGCCTC
TTCTTCAACG CAACCACCAA GCCGATCGTC ACCAAGTTCG CCGTCGACCA GTCGGCCTTC TTCGACCAGT ACGTCTACTC CGTCGTCAAG ATGGGCATGA TCGAGGTGCT CACCGGCTCG
CAGGGGCAGA TCCGCAAGCG CTGTTCGGTG TCCAACGCCG CCGCCGCCGG CGACCGTGCT TGGTCCGTCG TGGAGACCGT CGCTGAGGCC GCCGAGAGCT TGGTGCTGTA G
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCGTCCA GGACTAGTGC TACTGCCGGC ATGCTGCTGC TCGCCGCCGC GGCTGCGCTG GTGTGCAGCT CGGCGGCGGC GAGGATGCCG CCGTTGGCGA AGGGGTTGTC GTTGGGCTAC
TACGACGCGA GTTGCCCGCA GGCGGAGGCC GTCGTGTTCG AGTTCCTGCA GGACGCCATC GCCAAGGACG TCGGCCTCGC CGCGGCGCTG ATCCGGCTCC ACTTCCACGA CTGCTTCGTC
CAGGGCTGCG ACGCCTCCAT CCTGCTCGAC AGCACACCCA CCGAGAAGAG CGAGAAGTTG GCGCCGCCGA ACAAGACCCT CCGCAAGTCG GCGTTCGACG CCATCGACGA TCTCCGCGAC
CTGCTCGACA GGGAATGCGG CGACACCGTC GTGTCCTGCT CCGACATCGT CACCCTCGCC GCCCGCGACT CCGTCCTCCT CGCCGGTGGC CCGTGGTACG ATGTTCCCCT CGGCCGCCAC
GACGGCTCCA GTTTCGCGTC TGAGGACGCC GTCCTGAGCG CGCTCCCGTC GCCGGACTCC AACGTCACCA CGCTCCTCGA AGCGCTGGGC AAGCTCAAGC TCGACGCCCA CGACCTCGTC
GCCCTCTCCG GCGCGCACAC CGTCGGCATC GCGCACTGCA CTTCCTTCGA CAAGCGCCTC TTCCCTCAAG TCGACCCCAC CATGGACAAG TGGTTCGCCG GCCACCTCAA GGTCACCTGC
CCGGTGCTGA ACACCAACGA CACCACCGTC AACGACATCC GGACGCCCAA CACCTTCGAC AACAAGTACT ACGTCGACCT GCAAAACCGC CAGGGCCTCT TCACCTCCGA CCAGGGCCTC
TTCTTCAACG CAACCACCAA GCCGATCGTC ACCAAGTTCG CCGTCGACCA GTCGGCCTTC TTCGACCAGT ACGTCTACTC CGTCGTCAAG ATGGGCATGA TCGAGGTGCT CACCGGCTCG
CAGGGGCAGA TCCGCAAGCG CTGTTCGGTG TCCAACGCCG CCGCCGCCGG CGACCGTGCT TGGTCCGTCG TGGAGACCGT CGCTGAGGCC GCCGAGAGCT TGGTGCTGTA G
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Retrieve as FASTA
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