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Entry information : EcamPrx[P]90 ( EcC064667.10)
Entry ID 10336
Creation 2012-01-30 (Qiang Li)
Last sequence changes 2012-02-03 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Christophe Dunand
Last annotation changes 2016-03-11 (Christophe Dunand)
Peroxidase information: EcamPrx[P]90 ( EcC064667.10)
Name (synonym) EcamPrx[P]90 ( EcC064667.10)
Class Class III peroxidase     [Orthogroup: Prx010]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus camaldulensis    [TaxId: 34316 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EcamPrx[P]90
start..stop		 S start..stop
EglPrx[P]90 268 6.11e-92 47..179 141..273
EgrPrx[P]90 266 1.29e-90 47..177 182..312
EguPrx[P]90 263 1.3e-89 47..177 182..312
EglPrx[P]180 221 8.5e-75 47..179 55..185
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..537 535  
join(1..537)


exon

Literature and cross-references EcamPrx[P]90 ( EcC064667.10)
Protein sequence: EcamPrx[P]90 ( EcC064667.10)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   179 (294)
PWM (Da):   %s   19398.57 (31776.7)  
PI (pH):   %s   8.22 (4.58) Peptide Signal:   %s   cut: 24 range:24-317
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MVASQVFHLR ENSHSFGLCT LEGFSLIVVG RKSPDHDPPS YMRFCTAGVH TIGQARCFVF RIRIYNEKNI KPAYAASLRQ NCPSAGGDAN LVPLEDGDVN GKVFNNDYFK NLVSMKGLLH 
TDQQLFNNGS TDADVKAYSL DSASFFADLA NALAKMGNLS PLTGTDGQVR TNCRKVNGS 

Retrieve as FASTA  
Remarks Pseudogene sequence from genomic. Incorrect prediction from kazusa (5' end is missing due to the ending of contig).
DNA ►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGTCGCCT CTCAGGTGTT TCATCTAAGA GAGAACTCTC ATTCTTTTGG TCTTTGCACT TTGGAAGGGT TTTCTTTAAT TGTCGTTGGG AGAAAATCGC CAGACCACGA TCCACCGTCG  TACATGCGCT TTTGTACCGC AGGAGTTCAC ACGATAGGCC AAGCGAGGTG CTTTGTGTTC CGCATTCGCA TCTACAATGA GAAGAACATC AAGCCCGCGT ACGCCGCGTC GCTGAGGCAG  AACTGTCCCA GCGCAGGCGG GGACGCTAAT CTCGTGCCGC TCGAGGATGG CGACGTCAAC GGCAAAGTGT TCAACAACGA CTACTTCAAG AACCTAGTGA GCATGAAGGG CCTCCTGCAC  ACGGACCAGC AGCTGTTCAA CAACGGATCC ACTGACGCGG ATGTGAAGGC CTACAGCCTC GACTCGGCAT CCTTCTTCGC CGATCTGGCC AATGCCCTGG CGAAGATGGG GAACCTCAGC 
CCCCTCACGG GAACGGACGG GCAAGTTAGG ACCAATTGCA GGAAGGTTAA TGGATCT 

Retrieve as FASTA  
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGTCGCCT CTCAGGTGTT TCATCTAAGA GAGAACTCTC ATTCTTTTGG TCTTTGCACT TTGGAAGGGT TTTCTTTAAT TGTCGTTGGG AGAAAATCGC CAGACCACGA TCCACCGTCG  TACATGCGCT TTTGTACCGC AGGAGTTCAC ACGATAGGCC AAGCGAGGTG CTTTGTGTTC CGCATTCGCA TCTACAATGA GAAGAACATC AAGCCCGCGT ACGCCGCGTC GCTGAGGCAG  AACTGTCCCA GCGCAGGCGG GGACGCTAAT CTCGTGCCGC TCGAGGATGG CGACGTCAAC GGCAAAGTGT TCAACAACGA CTACTTCAAG AACCTAGTGA GCATGAAGGG CCTCCTGCAC  ACGGACCAGC AGCTGTTCAA CAACGGATCC ACTGACGCGG ATGTGAAGGC CTACAGCCTC GACTCGGCAT CCTTCTTCGC CGATCTGGCC AATGCCCTGG CGAAGATGGG GAACCTCAGC 
CCCCTCACGG GAACGGACGG GCAAGTTAGG ACCAATTGCA GGAAGGTTAA TGGATCT 

Retrieve as FASTA