Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
322 (301) |
PWM (Da): |
22743.56 (20538.3) |
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PI (pH):
| 9.53 (9.53) |
Peptide Signal:
| cut: 22 range:22-322 |
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Sequence 0
Send to BLAST
Send to Peroxiscan
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MAFLTLFQAL LILSLAASTL STRPYKNGLT PYFYDYVCPQ ALPAIxxxxx xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx
xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx xxANNDIPAP NMDLPALINN FKRQGLKVKD LVALSGAHTI GFAQCFTFRN RTFNDSNINQ AFAKNLRSYC PRTGSDSNLA
SLDPTPARFD TLYYNNLLTQ KGLLHSDQAL STGESALELV KSYSHDYEAF WKDFAKSMVR MGNIKPLTGN QGQIRSNCRR LN
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Retrieve as FASTA
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Remarks |
Partial sequence from genomic. Incorrect prediction from kazusa (no overlap between two contigs: EcC039901 (5' end) and EcC020352 (3' end)). |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCCTTCC TCACCCTCTT CCAAGCGCTT CTCATCTTGT CCCTCGCGGC CTCAACTCTT TCGACTCGTC CTTACAAGAA TGGCCTCACG CCATACTTCT ACGACTACGT TTGCCCTCAA
GCCTTGCCTG CCATCTnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnGCAA ACAACGACAT CCCTGCGCCG
AACATGGACT TACCCGCCTT AATTAACAAT TTCAAGAGAC AAGGCCTGAA GGTCAAGGAC TTGGTCGCGC TGAGCGGCGC TCACACAATC GGCTTCGCAC AGTGCTTTAC TTTCAGGAAT
AGGACATTCA ATGACAGCAA CATCAACCAG GCATTCGCAA AGAATCTCCG GTCCTACTGC CCGCGCACAG GAAGCGACTC TAACCTCGCA AGTTTAGATC CCACGCCAGC GCGTTTCGAC
ACATTGTACT ACAATAACTT GTTGACCCAG AAGGGCCTTC TTCACTCTGA TCAGGCACTG TCAACTGGTG AATCCGCACT CGAGCTAGTG AAGAGCTATA GCCACGATTA TGAAGCATTT
TGGAAGGATT TCGCTAAATC GATGGTCAGA ATGGGAAATA TCAAGCCACT GACCGGAAAC CAAGGTCAAA TTCGCTCGAA TTGCCGGAGG TTGAAT
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCCTTCC TCACCCTCTT CCAAGCGCTT CTCATCTTGT CCCTCGCGGC CTCAACTCTT TCGACTCGTC CTTACAAGAA TGGCCTCACG CCATACTTCT ACGACTACGT TTGCCCTCAA
GCCTTGCCTG CCATCTnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnGCAA ACAACGACAT CCCTGCGCCG
AACATGGACT TACCCGCCTT AATTAACAAT TTCAAGAGAC AAGGCCTGAA GGTCAAGGAC TTGGTCGCGC TGAGCGGCGC TCACACAATC GGCTTCGCAC AGTGCTTTAC TTTCAGGAAT
AGGACATTCA ATGACAGCAA CATCAACCAG GCATTCGCAA AGAATCTCCG GTCCTACTGC CCGCGCACAG GAAGCGACTC TAACCTCGCA AGTTTAGATC CCACGCCAGC GCGTTTCGAC
ACATTGTACT ACAATAACTT GTTGACCCAG AAGGGCCTTC TTCACTCTGA TCAGGCACTG TCAACTGGTG AATCCGCACT CGAGCTAGTG AAGAGCTATA GCCACGATTA TGAAGCATTT
TGGAAGGATT TCGCTAAATC GATGGTCAGA ATGGGAAATA TCAAGCCACT GACCGGAAAC CAAGGTCAAA TTCGCTCGAA TTGCCGGAGG TTGAAT
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Retrieve as FASTA
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