Entry information : EcamPrx38 ( EcS621318.10)
Entry ID 10363
Creation 2012-01-30 (Qiang Li)
Last sequence changes 2013-02-06 (Qiang Li)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2016-03-12 (Christophe Dunand)
Peroxidase information: EcamPrx38 ( EcS621318.10)
Name (synonym) EcamPrx38 ( EcS621318.10)
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus camaldulensis    [TaxId: 34316 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EcamPrx38
start..stop
S start..stop
EguPrx[P]40 181 8.46e-61 2..103 30..131
EgrPrx[P]40 179 2.48e-60 1..103 29..131
EglPrx32 169 9.82e-54 1..105 29..134
EgrPrx32 169 1.08e-53 1..105 29..134
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '10363' 'join(1..141,260..433)' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..141 139 N° 2 260..433 172  
join(1..141,260..433)


exon

Literature and cross-references EcamPrx38 ( EcS621318.10)
Protein sequence: EcamPrx38 ( EcS621318.10)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   105 (304)
PWM (Da):   %s   11540.8 (32999.4)  
PI (pH):   %s   6.33 (8.56) Peptide Signal:   %s   cut: 34 range:34-337
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
DGLSPHYDYICPQALATIKHVIEAMVQQERRMGASLLRLHFHYCF
VN
GCDALMLLDPTPTINNEKLALHNNNSARGFKVIGQIKEEVDGVWGCPVVSCVDILAIT

Retrieve as FASTA  
Remarks Partial sequence from genomic. Incorrect prediction from kazusa (Two ends are missing due to short contig).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GACGGCCTCTCGCCACACTATGACTATATATGCCCTCAAGCCTTAGCCACCATCAAGCACGTCATTGAGGCGATGGTGCAGCAAGAGCGACGAATGGGTGCGTCCTTGCTGCGTTTGCAC
TTCCACTACTGTTTCGTCAAT
ATCTAAGACATAAACAGCTAAGTTTCACATTAATTTGTTGTTCTAAAAAATAGTGATTACTATTTAGCATTGCACAATACTTGCTAACATTGATGTTTG
TTTGGGAGTTCAATAATGCAGGGTTGTGATGCATTGATGCTCTTGGATCCGACCCCGACCATCAACAATGAAAAGCTTGCTCTTCATAATAACAATTCAGCTAGAGGGTTCAAAGTGATC
GGCCAAATTAAGGAGGAGGTCGATGGAGTATGGGGATGTCCGGTGGTATCTTGTGTGGACATCTTGGCAATCACT

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
GACGGCCTCTCGCCACACTATGACTATATATGCCCTCAAGCCTTAGCCACCATCAAGCACGTCATTGAGGCGATGGTGCAGCAAGAGCGACGAATGGGTGCGTCCTTGCTGCGTTTGCAC
TTCCACTACTGTTTCGTCAAT
GGTTGTGATGCATTGATGCTCTTGGATCCGACCCCGACCATCAACAATGAAAAGCTTGCTCTTCATAATAACAATTCAGCTAGAGGGTTCAAAGTGATC
GGCCAAATTAAGGAGGAGGTCGATGGAGTATGGGGATGTCCGGTGGTATCTTGTGTGGACATCTTGGCAATCACT

Retrieve as FASTA