Entry information : OsPrx27(LOC_Os02g14160)
Entry ID 1037
Creation 2006-06-23 (Filippo Passardi)
Last sequence changes 2006-06-23 (Filippo Passardi)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2010-08-03 (Marie Brette (Scipio))
Peroxidase information: OsPrx27(LOC_Os02g14160)
Name OsPrx27(LOC_Os02g14160)
Class Class III peroxidase    [Orthogroup: Prx134]
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Monocotyledons
Organism Oryza sativa ssp japonica cv Nipponbare    [TaxId: 39947 ]
Cellular localisation N/D
Tissue types Roots
Shoots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value OsPrx27
start..stop
S start..stop
TaPrx89-1B 508 0 18..321 21..325
TaPrx89-1A 508 0 18..321 21..325
TaPrx89-1D 508 0 18..321 21..325
BdiPrx96 505 0 27..321 26..322
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 7750479..7750700 222 N° 2 7750828..7751019 192 N° 3 7751748..7752299 552  
join(7750479..7750700,7750828..7751019,7751748..7752299)


exon

Literature and cross-references OsPrx27(LOC_Os02g14160)
Literature Passardi F., Longet, D., Penel C. and Dunand, C. The class III peroxidase multigenic family in rice and its evolution in land plants Phytochemistry, 65 (13), 1879-1893 (2004)
Protein ref. GenPept:   BAD27598 UniProtKB:   Q6EUS1
DNA ref. GenBank:   NC_008395.1 (7750479..7752296)
Cluster/Prediction ref. UniGene:   Os.68693
Protein sequence: OsPrx27(LOC_Os02g14160)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   321 (294)
PWM (Da):   %s   33186.63 (30572.1)  
PI (pH):   %s   8.21 (7.98) Peptide Signal:   %s   cut: 28 range:28-321
Sequence 362
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAGAVLVRRMVVVVAIAALVAPGEVAAQLTPTYYDGSCPSLQSIVRSAMAAAVQQEPRMGASILRLFFHDCFVNGCDASVLLDDSSTITGEKNAGPNANSLRGFEVIDSIKSQVEAACPGTVSCADILAVAARDGVNLLGGPTWAVQLGRRDTRTASQSAANSNLPSPSSSAAALVSAFASKGLDSRDMVALSGAHTIGAARCATFRARVYNDTNISPGFAVRRRQVCPASGGDGNLAPLDALSSVRFDNGYFRNLMGRFGLLHSDQELFNGGPVDSIAQQYAANGAAFSRDFVTAVVKMGNISPLTGSSGEVRSNCRKPN

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 2, 2 introns) and 3 ESTs.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TGGCTGGAGCCGTGCTGGTGAGGAGAATGGTGGTGGTGGTTGCCATTGCCGCCTTGGTGGCGCCCGGCGAGGTGGCGGCGCAGCTGACGCCGACGTACTACGACGGCAGCTGCCCGAGCC
TGCAGTCCATCGTGAGGTCGGCCATGGCGGCCGCCGTGCAGCAAGAGCCCCGCATGGGCGCCTCCATCCTCCGCCTCTTCTTCCACGACTGCTTCGTCAAT
GTAAGTACACCATAGCTAG
CTAGCTAGCTTGAGAGTGGCCAGCCATGGCGGCTCTGAGAATGACGGCGGATGGGGATCGAGCTGATGGTCGCTCGCCGGCGTTCATGGCGATTATATATGATTGCAGGGGTGCGACGCG
TCGGTGCTGCTGGACGACTCGTCGACGATCACCGGCGAGAAGAACGCCGGGCCGAACGCCAACTCGCTGCGCGGATTCGAGGTCATCGACTCCATCAAGTCGCAGGTCGAGGCCGCCTGC
CCCGGCACCGTCTCCTGCGCCGACATCCTCGCCGTCGCCGCCCGCGACGGCGTCAACCTG
GTAATTAATCAATTTACCAACCAATTTAATTAATAATTACTTTTACACTTGCATGCATGT
CAATTTTTTTTTTTACCGTGCGGCCGCTCGCCGACAGGCCGTACAGCCAACTCAAGCTGCAAATGCAACGCACTGCATCATGCCCGTGTCAAAAAGCCACCTACATTTTTAATGACGCAC
GCATGCTCGCGCCGCGCGACAAATTACAATCTAGAGCCATCCGCACATGCCGTACCCCCTCAGTCTCAAAATATTGTTTACATGTAATTCAAATAAAAAAATTTAACTCTAAATATTTTC
GTTACGAAATGCAAAAGTTAAATTTGGATTTACATATTTGTGGGAATGATATATCATATATTAATACATCTGCTTAATTTTTTTTAATTTTTTTAGAATTATTTGGGTGACGTGCAAATA
AGGAAGGACATACCCTCAAGAGTTTAGAATAATTTCCTGTCCAATATCTCACTGCCATGTGGGCCATCCCCTCCCACGTCCATGTACAGTTGATTTGCGTTGATTTTACTTGCGGCTGCA
TGCATGACGAAAAATGATTGACGCTGATGGATGGATCGACCGATCGCCTTAGCCTGTCAATCTTGTCGTGCATGGGGTGTCAAGACCTGCCTAATCACCACACCAAATTGTAACTAAACT
AATTTTACAGCGGTAATCAACTCGAGAGAAGTAAAACTAATTTGGTGCGTAAATTTGATTTGCTGCAGTTGGGTGGGCCGACGTGGGCGGTGCAGCTGGGGCGGCGCGACACGCGGACGG
CGAGCCAGTCGGCGGCGAACAGCAACCTGCCGTCGCCGTCGTCGAGCGCGGCGGCGCTGGTGTCGGCGTTCGCGTCCAAGGGGCTCGACTCCCGCGACATGGTGGCGCTGTCGGGCGCCC
ACACCATCGGCGCCGCCCGGTGCGCCACCTTCCGCGCCCGCGTCTACAACGACACCAACATCAGCCCCGGGTTCGCCGTCCGCCGGCGGCAGGTGTGCCCGGCGAGCGGCGGCGACGGCA
ACCTGGCGCCGCTCGACGCGCTCAGCTCCGTCCGCTTCGACAACGGCTACTTCCGCAACCTCATGGGCCGCTTCGGCCTCCTCCACTCTGACCAGGAGCTCTTCAATGGCGGGCCCGTCG
ACTCCATCGCGCAGCAGTACGCCGCCAATGGCGCCGCCTTCTCCCGCGACTTCGTCACCGCCGTCGTCAAGATGGGCAACATCAGCCCGCTCACCGGCTCCAGCGGCGAGGTCCGCTCCA
ACTGCCGGAAGCCCAACTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TGGCTGGAGCCGTGCTGGTGAGGAGAATGGTGGTGGTGGTTGCCATTGCCGCCTTGGTGGCGCCCGGCGAGGTGGCGGCGCAGCTGACGCCGACGTACTACGACGGCAGCTGCCCGAGCC
TGCAGTCCATCGTGAGGTCGGCCATGGCGGCCGCCGTGCAGCAAGAGCCCCGCATGGGCGCCTCCATCCTCCGCCTCTTCTTCCACGACTGCTTCGTCAAT
GGGTGCGACGCGTCGGTGC
TGCTGGACGACTCGTCGACGATCACCGGCGAGAAGAACGCCGGGCCGAACGCCAACTCGCTGCGCGGATTCGAGGTCATCGACTCCATCAAGTCGCAGGTCGAGGCCGCCTGCCCCGGCA
CCGTCTCCTGCGCCGACATCCTCGCCGTCGCCGCCCGCGACGGCGTCAACCTG
TTGGGTGGGCCGACGTGGGCGGTGCAGCTGGGGCGGCGCGACACGCGGACGGCGAGCCAGTCGGCGG
CGAACAGCAACCTGCCGTCGCCGTCGTCGAGCGCGGCGGCGCTGGTGTCGGCGTTCGCGTCCAAGGGGCTCGACTCCCGCGACATGGTGGCGCTGTCGGGCGCCCACACCATCGGCGCCG
CCCGGTGCGCCACCTTCCGCGCCCGCGTCTACAACGACACCAACATCAGCCCCGGGTTCGCCGTCCGCCGGCGGCAGGTGTGCCCGGCGAGCGGCGGCGACGGCAACCTGGCGCCGCTCG
ACGCGCTCAGCTCCGTCCGCTTCGACAACGGCTACTTCCGCAACCTCATGGGCCGCTTCGGCCTCCTCCACTCTGACCAGGAGCTCTTCAATGGCGGGCCCGTCGACTCCATCGCGCAGC
AGTACGCCGCCAATGGCGCCGCCTTCTCCCGCGACTTCGTCACCGCCGTCGTCAAGATGGGCAACATCAGCCCGCTCACCGGCTCCAGCGGCGAGGTCCGCTCCAACTGCCGGAAGCCCA
ACTAA

Retrieve as FASTA