Sequence Properties
first value : protein second value (mature protein)
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Length (aa): |
135 |
PWM (Da): |
14986.19 |
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PI (pH):
| 6.24 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
GGHSLGKTSC SFIPDRLYDF NKTGEPDPSM DSTFLSQLRE QCPPNSTNLA YLNPDLGSSY SFGNSFYSRV RHHQAVLGIN QQIASNFDSS LIAWEYDVRF GDFQKMFGMS TIRMGNIKLL
PEDQG*IRKN C*VVDGK
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Retrieve as FASTA
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Remarks |
Pseudogene from genomic. Incorrect prediction from kazusa (5' end is missing due to NNNNNN; stops in frame). |
DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
GGGGGGCATT CACTGGGCAA GACCAGTTGC AGCTTCATCC CGGACAGGTT GTACGATTTC AACAAAACTG GCGAGCCAGA CCCAAGCATG GACTCAACCT TCTTGTCCCA ATTGAGGGAG
CAATGCCCTC CGAACTCAAC GAATCTAGCG TACCTCAACC CTGACTTAGG CTCGAGCTAC AGCTTCGGCA ATTCCTTCTA CTCAAGGGTA CGGCACCACC AGGCGGTCCT CGGCATCAAC
CAGCAGATCG CTAGCAACTT CGACAGCTCC CTGATCGCTT GGGAGTATGA TGTCAGATTC GGGGACTTCC AGAAGATGTT CGGCATGTCA ACAATCCGGA TGGGGAACAT CAAGCTCCTA
CCGGAGGATC AGGGGTAGAT TCGCAAGAAT TGCTGAGTCG TGGACGGGAA A
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
GGGGGGCATT CACTGGGCAA GACCAGTTGC AGCTTCATCC CGGACAGGTT GTACGATTTC AACAAAACTG GCGAGCCAGA CCCAAGCATG GACTCAACCT TCTTGTCCCA ATTGAGGGAG
CAATGCCCTC CGAACTCAAC GAATCTAGCG TACCTCAACC CTGACTTAGG CTCGAGCTAC AGCTTCGGCA ATTCCTTCTA CTCAAGGGTA CGGCACCACC AGGCGGTCCT CGGCATCAAC
CAGCAGATCG CTAGCAACTT CGACAGCTCC CTGATCGCTT GGGAGTATGA TGTCAGATTC GGGGACTTCC AGAAGATGTT CGGCATGTCA ACAATCCGGA TGGGGAACAT CAAGCTCCTA
CCGGAGGATC AGGGGTAGAT TCGCAAGAAT TGCTGAGTCG TGGACGGGAA A
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Retrieve as FASTA
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