1. Browse the Database
  2. View Redoxidase
Entry information : EcamAPx-R[P] (EcC002525.10)
Entry ID 10446
Creation 2012-01-30 (Qiang Li)
Last sequence changes 2012-02-06 (Qiang Li)
Sequence status theoretical translation / pseudogene
Reviewer Qiang Li
Last annotation changes 2012-02-07 (Qiang Li)
Peroxidase information: EcamAPx-R[P] (EcC002525.10)
Name (synonym) EcamAPx-R[P] (EcC002525.10)
Class Ascorbate peroxidase related     [Orthogroup: APx-R001]*
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus camaldulensis    [TaxId: 34316 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EcamAPx-R[P]
start..stop		 S start..stop
EcamAPx-R 244 6.68e-82 1..178 1..171
EglAPx-R 244 1.19e-81 1..178 1..172
EguAPx-R 240 4.16e-80 1..178 1..172
EgrAPx-R 234 6.31e-78 1..178 1..172
Literature and cross-references EcamAPx-R[P] (EcC002525.10)
Protein sequence: EcamAPx-R[P] (EcC002525.10)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   178 (295)
PWM (Da):   %s   18466.44 (30844.8)  
PI (pH):   %s   10.04 (4.06) Peptide Signal:   %s   cut: 26 range:26-320
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MASPLPSTTP LSPPTCCSSS SSSSSSSSSS SHPSSHRTKF ELPAKSQRSS PSPICSRAGA IASPLSSTAS AASSGERDPV RRKKLIAMVA TLPFLLQLRG CAKGIVTNAT ELETDESTMI 
KEVVRKVVSK VKAAGVLRLV FHDAGTFEMG ENSGGMNGSI VYELERPENA GLKKPVKV 

Retrieve as FASTA  
Remarks Pseudogene from genomic. Incorrect prediction from kazusa (Bad annotation at 5' end, 3' end is missing).
DNA ►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTTCAC CGTTGCCATC GACGACCCCC CTCTCCCCCC ACCTGCTGCT CCTCCTCCTC CTCCTCCTCC TCCTCCTCCT CCTCCTCATC CCATCCCTCT TCTCACAGGA CGAAATTCGA  ATTACCCGCC AAATCCCAAC GGTCTTCTCC CTCACCCATC TGCTCTCGTG CCGGAGCTAT TGCCTCTCCC TTAAGCTCGA CTGCCAGCGC CGCTTCTTCC GGTGAGCGCG ACCCCGTGTG  CAGTCGATGT TTTGTGAATC CAGTTGATCA CGATCTTCCT GAGTTCGCAG CCGGAGACCG TGTCTCGAGG AGGAGGAAGA AGCTCATAGC CATGGTGGCC ACATTGCCGT TTCTCCTTCA  GTTGCGCGGT TGCGCGAAGG GAATCGTCAC CAACGCCACC GAGTAAGCTC GTCACTCTTT GCTTTAGTTG ATGGGAAGTC CATATTCTTT ATCGGTTGGA CCGAATGAAA CGGGAATTTC  GAGGGAGATT GAGATGCTTT TGAGCTTTGG AGTTGAGCCT GCGGAGCGAA AGAAGGCTAT GTGTTTTCGT CGGTGGTCGG ATTATGGCTT TTGCAGCTGC TTCTTTCGGT GATCAGTTTG  TGTGTATGTG TGCATGCTAC AGAGTTGTCC CGCCGAAATG ACGCTTTTTG CTTCCTTTAA GGACTTCTTG CTATTTAAAA TAGGAGGTCC GGGTGTGGTC CTTTAGATTA TGAGATTTTA  GTTTGTGTTT CCGGCTGGCA CTTGAGGGGG AAAAACGTAT CCTGGGATGG GTTTTCTGGT TGCTCATTCA CTGACTTCCT GCATTTTAGT ATCTGTAAGT TGTACCTGTG AATTGTCTTG  TTTCACACAT TGATGTTATG GACACCGCAT TCAGCTGGGG AAAACCATTT TCGGTGATGG TTTGATGGGT CGAAATTGCG ATTTGGAAGT ACTAGTTGGA TAGGGCTGTG AGTTTGATAT  TTTGTTTATC ATGGCCTTGG GGCTGCATCT GTATTTGTGT TGATTTGGGG CAGTTGGATA TGTCCATGAC TGTTGGTTTT TCATGTTCGT ATATCAAAGA TTAGAAACTG ATGAATCCAC  GATGATAAAG GAAGTGGTCA GAAAGGTAGT TTCCAAGGTG AAGGCTGCTG GTGTGCTTCG TTTGGTATTT CATGATGCTG GAACCTTTGA AATGGGTGAA AATTCAGGGA TTTTACATGG  ACAGAAAGTT AAAGTACTAC AAATAATTAT ACTTGACATC AGTAACTGTG CTCCATATCT CTGGCTACAA TTTTTGAATG CCTACTAATC GATCCAAATT GTTTTATCCT CTTTTCCCCA  TAATTGAACT TTTGAGCTGA AGCTAAGATG ATGCGTATAT TGATTTCATC TGAATCTCAT TTGCCAAAAA AGTTAGATAA TCCCTGTAAA TGGGCATAAC TTTTTTTTTT GTCATGGTGG  TTAACTAAAT GAACAAGGGC GAGTAATTCT ATGACTGTTA AAGCAACTAC AGACTCTAAT GGACCTTATA AGTGAATGAT CGATCAAAGA GAGCAATATC ATTCATACTA CCTGTATTTG  TGAACGGTCA TGTGCGATTC TTTTAATGCA TGCACATACT TCTTTTGAGT TGAAATTTTT CTGCGTCTTG TCCTTTTGTC TGAGTATGGA TTTCAATCCT CACATTGTAA TTCTAATATG 
TTTTTGTGTC AATATCCAGG TGGTATGAAT GGTTCCATAG TTTATGAACT TGAAAGGCCT GAAAATGCTG GGCTAAAAAA GCCTGTGAAG GTA 

Retrieve as FASTA