Sequence Properties
first value : protein
second value (mature protein)
|
Length (aa):  |
290 |
| PWM (Da): |
30820.01 |
|
| PI (pH):
| 4.51 |
|
Sequence 386
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
SANFYVSSCPLALSIIQDAVNTVASSEPRMGASLPRLHFHDCFVNGCDGSVLLDDTDGFTGEKTAGGNVNSIRGLDVVDYIKTRLEEQCPGIVSCADILAAAARDSVVLGGPTWTVQLGRRDSTTASLSAANSDIPSPLSDLNVLISDFAEKGFSAKEMVALSGTHMIGRARSFLFRARIYNEENINPTFATS*RQNCPGAGGDDNLVPLETGDGDMFDNNYFKDLVSMKGLLHSDQQLFNNGSADRQVKAYSLDSASFFADLADAMVKMGNLSPLTGTDGEVRTNCRKV |
Retrieve as FASTA
|
|
| Remarks |
Pseudogene from genomic (Short 5' end is missing and Stop in frame). No prediction from Phytozome. No EST. |
DNA ►
Send to BLAST
|
| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
TCAGCGAACTTTTACGTGAGCTCGTGTCCTTTGGCTCTGTCCATTATCCAGGACGCCGTGAACACGGTGGCGTCCTCAGAGCCCCGAATGGGAGCCTCGCTTCCGCGTCTTCACTTCCAC
GATTGCTTTGTCAATGCAAGTTCTATTTTTACTCTTCATGTGTCGTCTTCATCATCAAAGTTCCACCGAAGACATCACTTTGCCATGGCAGATCCAGAACTTAGTATTCAATCCGTGGGT
TAAATAGTAGATCGAACACTTGTGTTACAGTTTGAGCCCAGACAAGTTTTCAATCAACTTTGTATGCTTCCGAGAACCTTTCATGAGGAGCACAGTAAGACGAACCTAGCATTATACAAT
TCCCTGCGCGGAAAAAAAAAAAAAAAAAAAACACATGACTAGGTTCACGCTGCCACTTCATACAAACGAAAGACGAAAAATGAGGCGAGTCTTCAGTAAATGTCACGACCCAATTTCGTA
TCGCGTTGTTTTTCCTAGATTATAAATGTCATATTCAGTCCTAGTCGATTCTTCTGCTTCCGTCCAAGCTGCTTTATCTGTCGAACTTTGTTCAAGCATAGAGGGAGCAAACGAGGTTGA
AGCAAAAGCTTAATGGCTTGTCCACAAAAAAATCTAATGATATCGAGGTTTAAACAGGGTTGCGACGGGTCTGTGTTGTTGGACGACACGGATGGATTCACCGGCGAGAAGACGGCTGGC
GGCAATGTAAATTCAATCAGGGGTTTGGACGTGGTCGACTACATCAAGACTCGGCTTGAAGAACAATGCCCTGGGATCGTATCGTGTGCTGACATCCTAGCCGCCGCAGCCCGCGATTCT
GTCGTTGCGGTAAGATGCCTTTTCTACTTGTATAGAAACACGAGATACCCTTCTGATCATCTCTCGAAAAAGAAGGGAGACCGAAAATCTCTCGATAAGCTCTCATTTCTTCTTAACACG
GCATGACAAACCAATTAATATTCTCATAAAATATAGTGGTTATGTGCTCCAACAATTATAGATTCTCCATATTGATTGGTCAGACATGGCAGTATTGGCAAAGAATATTACTTTCCATGC
CCATGGCGATGCATTAATCGATGATTTCGGAAAATATGTTACTCCAAGTATAGTCTTATATCCCTTTTTTCATCAACAAGACAGAAGGTGATTATGATCAGATTGATTATACTAATTGGG
GATCATGCAATAATTTTCAGTTGGGTGGACCTACGTGGACCGTTCAACTAGGCAGGAGAGATTCAACCACGGCAAGTTTGAGCGCTGCAAACAGCGATATTCCTTCGCCCCTCTCGGACC
TTAATGTTCTCATATCTGACTTCGCTGAGAAGGGATTCTCTGCCAAAGAAATGGTCGCCCTCTCAGGTGTTTCATCTAATTTACTTGGCCTTGGCAAAAAATGTCATTAATCTAAGAGAG
AAGTATCGTTCTTTTGGTCTTCGCACTCTGGAAAGGCTTTCTCTGATTGTTGCTGAAAGAAAATCGCCCGACTATGATCCACCGTCGTACATGCGCTTTTGTGCCGCAGGAACTCACATG
ATAGGCCGAGCGAGGAGCTTCCTGTTCCGTGCTCGCATCTACAACGAGGAGAACATCAACCCCACATTCGCCACGTCGTAGAGGCAGAACTGTCCCGGTGCAGGCGGGGATGATAATCTC
GTGCCGCTTGAGACCGGCGACGGTGACATGTTCGACAATAACTACTTCAAGGACCTAGTGAGCATGAAGGGCCTCCTGCACTCGGACCAGCAGCTGTTCAACAACGGATCCGCCGACAGG
CAGGTGAAGGCCTACAGCCTCGACTCGGCCTCCTTCTTCGCCGATCTGGCCGATGCCATGGTGAAGATGGGGAACCTCAGCCCCCTCACAGGAACGGATGGGGAAGTCAGGACCAACTGC
AGGAAAGTTAAT |
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
| .........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
TCAGCGAACTTTTACGTGAGCTCGTGTCCTTTGGCTCTGTCCATTATCCAGGACGCCGTGAACACGGTGGCGTCCTCAGAGCCCCGAATGGGAGCCTCGCTTCCGCGTCTTCACTTCCAC
GATTGCTTTGTCAATGGTTGCGACGGGTCTGTGTTGTTGGACGACACGGATGGATTCACCGGCGAGAAGACGGCTGGCGGCAATGTAAATTCAATCAGGGGTTTGGACGTGGTCGACTAC
ATCAAGACTCGGCTTGAAGAACAATGCCCTGGGATCGTATCGTGTGCTGACATCCTAGCCGCCGCAGCCCGCGATTCTGTCGTTTTGGGTGGACCTACGTGGACCGTTCAACTAGGCAGG
AGAGATTCAACCACGGCAAGTTTGAGCGCTGCAAACAGCGATATTCCTTCGCCCCTCTCGGACCTTAATGTTCTCATATCTGACTTCGCTGAGAAGGGATTCTCTGCCAAAGAAATGGTC
GCCCTCTCAGGAACTCACATGATAGGCCGAGCGAGGAGCTTCCTGTTCCGTGCTCGCATCTACAACGAGGAGAACATCAACCCCACATTCGCCACGTCGTAGAGGCAGAACTGTCCCGGT
GCAGGCGGGGATGATAATCTCGTGCCGCTTGAGACCGGCGACGGTGACATGTTCGACAATAACTACTTCAAGGACCTAGTGAGCATGAAGGGCCTCCTGCACTCGGACCAGCAGCTGTTC
AACAACGGATCCGCCGACAGGCAGGTGAAGGCCTACAGCCTCGACTCGGCCTCCTTCTTCGCCGATCTGGCCGATGCCATGGTGAAGATGGGGAACCTCAGCCCCCTCACAGGAACGGAT
GGGGAAGTCAGGACCAACTGCAGGAAAGTTAAT |
Retrieve as FASTA
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