Sequence Properties
first value : protein second value (mature protein)
|
Length (aa): |
290 |
PWM (Da): |
30820.01 |
|
PI (pH):
| 4.51 |
|
Sequence 386
Send to BLAST
Send to Peroxiscan
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
SANFYVSSCPLALSIIQDAVNTVASSEPRMGASLPRLHFHDCFVNGCDGSVLLDDTDGFTGEKTAGGNVNSIRGLDVVDYIKTRLEEQCPGIVSCADILAAAARDSVVLGGPTWTVQLGRRDSTTASLSAANSDIPSPLSDLNVLISDFAEKGFSAKEMVALSGTHMIGRARSFLFRARIYNEENINPTFATS*RQNCPGAGGDDNLVPLETGDGDMFDNNYFKDLVSMKGLLHSDQQLFNNGSADRQVKAYSLDSASFFADLADAMVKMGNLSPLTGTDGEVRTNCRKV |
Retrieve as FASTA
|
|
Remarks |
Pseudogene from genomic (Short 5' end is missing and Stop in frame). No prediction from Phytozome. No EST. |
DNA ►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
TCAGCGAACTTTTACGTGAGCTCGTGTCCTTTGGCTCTGTCCATTATCCAGGACGCCGTGAACACGGTGGCGTCCTCAGAGCCCCGAATGGGAGCCTCGCTTCCGCGTCTTCACTTCCAC GATTGCTTTGTCAATGCAAGTTCTATTTTTACTCTTCATGTGTCGTCTTCATCATCAAAGTTCCACCGAAGACATCACTTTGCCATGGCAGATCCAGAACTTAGTATTCAATCCGTGGGT TAAATAGTAGATCGAACACTTGTGTTACAGTTTGAGCCCAGACAAGTTTTCAATCAACTTTGTATGCTTCCGAGAACCTTTCATGAGGAGCACAGTAAGACGAACCTAGCATTATACAAT TCCCTGCGCGGAAAAAAAAAAAAAAAAAAAACACATGACTAGGTTCACGCTGCCACTTCATACAAACGAAAGACGAAAAATGAGGCGAGTCTTCAGTAAATGTCACGACCCAATTTCGTA TCGCGTTGTTTTTCCTAGATTATAAATGTCATATTCAGTCCTAGTCGATTCTTCTGCTTCCGTCCAAGCTGCTTTATCTGTCGAACTTTGTTCAAGCATAGAGGGAGCAAACGAGGTTGA AGCAAAAGCTTAATGGCTTGTCCACAAAAAAATCTAATGATATCGAGGTTTAAACAGGGTTGCGACGGGTCTGTGTTGTTGGACGACACGGATGGATTCACCGGCGAGAAGACGGCTGGC GGCAATGTAAATTCAATCAGGGGTTTGGACGTGGTCGACTACATCAAGACTCGGCTTGAAGAACAATGCCCTGGGATCGTATCGTGTGCTGACATCCTAGCCGCCGCAGCCCGCGATTCT GTCGTTGCGGTAAGATGCCTTTTCTACTTGTATAGAAACACGAGATACCCTTCTGATCATCTCTCGAAAAAGAAGGGAGACCGAAAATCTCTCGATAAGCTCTCATTTCTTCTTAACACG GCATGACAAACCAATTAATATTCTCATAAAATATAGTGGTTATGTGCTCCAACAATTATAGATTCTCCATATTGATTGGTCAGACATGGCAGTATTGGCAAAGAATATTACTTTCCATGC CCATGGCGATGCATTAATCGATGATTTCGGAAAATATGTTACTCCAAGTATAGTCTTATATCCCTTTTTTCATCAACAAGACAGAAGGTGATTATGATCAGATTGATTATACTAATTGGG GATCATGCAATAATTTTCAGTTGGGTGGACCTACGTGGACCGTTCAACTAGGCAGGAGAGATTCAACCACGGCAAGTTTGAGCGCTGCAAACAGCGATATTCCTTCGCCCCTCTCGGACC TTAATGTTCTCATATCTGACTTCGCTGAGAAGGGATTCTCTGCCAAAGAAATGGTCGCCCTCTCAGGTGTTTCATCTAATTTACTTGGCCTTGGCAAAAAATGTCATTAATCTAAGAGAG AAGTATCGTTCTTTTGGTCTTCGCACTCTGGAAAGGCTTTCTCTGATTGTTGCTGAAAGAAAATCGCCCGACTATGATCCACCGTCGTACATGCGCTTTTGTGCCGCAGGAACTCACATG ATAGGCCGAGCGAGGAGCTTCCTGTTCCGTGCTCGCATCTACAACGAGGAGAACATCAACCCCACATTCGCCACGTCGTAGAGGCAGAACTGTCCCGGTGCAGGCGGGGATGATAATCTC GTGCCGCTTGAGACCGGCGACGGTGACATGTTCGACAATAACTACTTCAAGGACCTAGTGAGCATGAAGGGCCTCCTGCACTCGGACCAGCAGCTGTTCAACAACGGATCCGCCGACAGG CAGGTGAAGGCCTACAGCCTCGACTCGGCCTCCTTCTTCGCCGATCTGGCCGATGCCATGGTGAAGATGGGGAACCTCAGCCCCCTCACAGGAACGGATGGGGAAGTCAGGACCAACTGC AGGAAAGTTAAT |
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
TCAGCGAACTTTTACGTGAGCTCGTGTCCTTTGGCTCTGTCCATTATCCAGGACGCCGTGAACACGGTGGCGTCCTCAGAGCCCCGAATGGGAGCCTCGCTTCCGCGTCTTCACTTCCAC GATTGCTTTGTCAATGGTTGCGACGGGTCTGTGTTGTTGGACGACACGGATGGATTCACCGGCGAGAAGACGGCTGGCGGCAATGTAAATTCAATCAGGGGTTTGGACGTGGTCGACTAC ATCAAGACTCGGCTTGAAGAACAATGCCCTGGGATCGTATCGTGTGCTGACATCCTAGCCGCCGCAGCCCGCGATTCTGTCGTTTTGGGTGGACCTACGTGGACCGTTCAACTAGGCAGG AGAGATTCAACCACGGCAAGTTTGAGCGCTGCAAACAGCGATATTCCTTCGCCCCTCTCGGACCTTAATGTTCTCATATCTGACTTCGCTGAGAAGGGATTCTCTGCCAAAGAAATGGTC GCCCTCTCAGGAACTCACATGATAGGCCGAGCGAGGAGCTTCCTGTTCCGTGCTCGCATCTACAACGAGGAGAACATCAACCCCACATTCGCCACGTCGTAGAGGCAGAACTGTCCCGGT GCAGGCGGGGATGATAATCTCGTGCCGCTTGAGACCGGCGACGGTGACATGTTCGACAATAACTACTTCAAGGACCTAGTGAGCATGAAGGGCCTCCTGCACTCGGACCAGCAGCTGTTC AACAACGGATCCGCCGACAGGCAGGTGAAGGCCTACAGCCTCGACTCGGCCTCCTTCTTCGCCGATCTGGCCGATGCCATGGTGAAGATGGGGAACCTCAGCCCCCTCACAGGAACGGAT GGGGAAGTCAGGACCAACTGCAGGAAAGTTAAT |
Retrieve as FASTA
|
|